Etheostoma cragini (Arkansas darter): 117946594
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Entry
117946594 CDS
T07493
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117946594
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ecra03310
]
117946594
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117946594
Nuclear receptors [BR:
ecra03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
117946594
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117946594
NCBI-ProteinID:
XP_034730741
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Position
6:25043840..25059267
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AA seq
445 aa
AA seq
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MFDYVEFQAFGPCEIIDLYTSTPSTACTLQDQDQDLAAFFPELIEADWQQHRCSQSVGSQ
SSSSSSDDLFASPASPPPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKNMVY
TCHRDRNCIINKITRNRCQYCRLQRCFAAGMSKESVRNDRNKRKGKKEAVKMTIMETYEL
TAELGLIVEKICRAHRETFPSLCQLGKYTTNSSSDHRIQLDLGLWDKFSELATKCIIKVV
EFAKRVPGFTGLTIADQITLLKTACLDILILRICTRYTPDKDTMTFSDGLTLTRTQIHNA
GFGPLTDQVFTFAGQLLPLQMDDTESGLLSAICLVSGDRQDLEEPSKVEVLQEPLLEALK
IYSRKRRPSMPLMFPKALMKITDLRSISAKGAERVVTLKMEIPGSMPPLIEEMLEDLQEL
EKHSEESRAEAKTSQHSNAPSPHST
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatgttgaatttcaagctttcggaccctgtgaaatcatcgacttgtacact
tctacacccagcacggcatgcacgctgcaggaccaggaccaggacctggcagccttcttc
cccgagctgatcgaggcggactggcagcagcaccggtgctcgcaatccgttggaagccag
agctccagctccagctcagacgacctgttcgccagccccgcctccccaccgccgcctcct
cgcacttacaagccctgttttgtgtgtcaagacaagtcctcggggtaccactatggcgtc
agcgcctgcgagggctgcaagggcttcttccgccgcagcgtgcagaaaaacatggtgtac
acctgccaccgagaccgaaactgcatcatcaacaagatcacgaggaaccgctgtcagtac
tgtcggctgcagaggtgctttgcagcgggaatgtcaaaggagtcagtgagaaacgacaga
aacaagaggaaggggaagaaggaggcggtgaagatgaccatcatggagacgtacgagctg
acggcggagctcggcctgatagtggagaagatctgcagggctcacagagagaccttcccc
tctctttgccagctgggaaaatacaccacaaactccagctcagaccacaggatccagctg
gacctcgggctgtgggacaagttcagcgagctcgccaccaagtgcatcatcaaggtggtg
gagttcgccaagcgagtgccgggtttcaccggcctgaccatcgccgaccagatcactctg
cttaaaactgcctgcctggacatcctgatcctgaggatttgcactcgctacactcctgac
aaagacaccatgacgttctccgacgggctgaccctgacccgcacccagatccacaacgcc
ggattcggaccgctgacagatcaggtcttcacatttgccggtcagctgcttccactgcag
atggacgacacggagagcggcctcctcagcgccatctgcctcgtctctggagaccgacag
gacctggaagagccgtctaaggtggaggtgctgcaggaaccgctgctggaggcgctgaag
atttactcccgcaaaaggcggcccagcatgcccctcatgttccccaaagccctcatgaag
atcactgacctccgcagcatcagcgccaaaggagctgagagggtggtgactctgaagatg
gagatcccgggctccatgccgcctctgatcgaggagatgctggaggatctgcaggagctg
gagaaacactctgaggagagcagagcggaggcaaagaccagccagcactcaaacgcaccg
tctcctcacagtacatga
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