Etheostoma cragini (Arkansas darter): 117946668
Help
Entry
117946668 CDS
T07493
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117946668 (irx1a)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117946668 (irx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
117946668
NCBI-ProteinID:
XP_034730841
LinkDB
All DBs
Position
6:complement(11441804..11446599)
Genome browser
AA seq
491 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGSERPGVLTPSSRGGSTEIGGSPSATAAAVTSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKESPGVHPASFAAHTSPAFYPYSQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGSRSKEDGEDGNLFGSGDEAEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDKSTEG
SRELRSGVGAGGELDSLEKRRAFALQAHEAFDKSKSTITAHPGSKENSDGSSNNTRVLSP
DRPGSFPLPSNNKPKIWSLAETATSPDSSSQKPTSPCGPAATTHTPAPHHQLQTHPAFLP
SHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNHHHHHNQQQHLAAQQQPTSVVVSP
GAAALSNDSKARAETHSPKHIEHENGVRSDSPPTQILKSSFRPIHDRSSLPSSARNPQDA
TQRVLTALSSA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctaggctacccgcagtacttaagtgcctcccaggcggtgtacggg
agcgagagaccgggagtgcttacgccttcgtcccggggagggagcacggaaatcggggga
agtccgtccgccaccgcagcggcggtcacctcggtgttgggcatgtacgccaacccgtac
gcacacaactacagcgctttcttaccgtacaccagcgcggacttggctcttttctcacaa
atgggatcccagtacgagctgaaggagagtcctggcgtccatcccgccagcttcgcagcc
cacacgtctccggccttctacccgtacagccagttccagtacggggacccggccaggccc
aagaacgccacccgggagagcaccagcaccctgaaggcctggctcaacgagcacaggaag
aacccgtacccgaccaagggggagaagatcatgctggccatcatcaccaagatgacgctg
acgcaggtctccacatggttcgccaacgccaggaggaggctcaagaaggagaacaaggtg
acctggggcagcaggagcaaagaggacggggaggacgggaacttgttcggcagcggcgac
gaggcggagaaaaacgaagacgaggaggagatcgatttggagagcatagatatagacaaa
atcgacgataacgacggggaccagagcaacgaggacgatgatgataaatccacggaggga
agcagggagctcaggagcggcgtgggcgcggggggggagctggacagcttggagaaaaga
cgggcattcgccctgcaggcccacgaggcctttgacaaatctaagagcacaattacagct
cacccagggagtaaggagaactcggacggcagcagcaacaacaccagagttttatccccg
gatcgacccgggagctttcctctcccgtctaacaacaagccgaaaatctggtctttagcc
gagacagccactagtcccgatagttcctctcagaaacccacgtccccgtgtggcccagcg
gccaccacgcacaccccagcgccgcaccaccagctccagacccacccggccttcctgccc
agtcacggactgtacacctgccagattggaaagttccacaactggacaaatggggctttc
ctgggccagaactccctgctgaatgtgaggtcgtttctgggagtaaaccatcaccaccac
cacaaccagcagcagcacttggcggcccagcagcagccgacttcagtggtggtgtcgccg
ggagcagcagcgctcagcaacgacagcaaggcccgggcagagacgcacagtcccaagcac
atagagcatgaaaacggtgtaaggtccgattcaccgccaacgcagatcctaaagtcttcc
tttcgacccatccatgacagatcctctctgccttccagcgccaggaatccacaagacgcc
acgcaacgagtcctcaccgctctctcctcggcttga
DBGET
integrated database retrieval system
