Etheostoma cragini (Arkansas darter): 117946669
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Entry
117946669 CDS
T07493
Symbol
itga8
Name
(RefSeq) integrin alpha-8
KO
K06584
integrin alpha 8
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
ecra04514
Cell adhesion molecules
ecra04810
Regulation of actin cytoskeleton
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117946669 (itga8)
04514 Cell adhesion molecules
117946669 (itga8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117946669 (itga8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117946669 (itga8)
04810 Regulation of actin cytoskeleton
117946669 (itga8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117946669 (itga8)
Cell adhesion molecules [BR:
ecra04515
]
Integrins
Integrin alpha subunits
117946669 (itga8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
117946669
NCBI-ProteinID:
XP_034730842
LinkDB
All DBs
Position
6:complement(15798242..15835252)
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AA seq
1054 aa
AA seq
DB search
MERVWDSVSSAGMFILGLLSVLWPSLNGVWSFNLYAEDPTVYRGPDGSYFGYSVDFYQPT
SDSNTFSVLVGAPKANTSQPGIVEAGAVYYCPWPGHSDSCRQIPFDNSNNRMIKVNGTRE
PLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKLSGEKDPVGTCYVAIQNFSAYAEYSP
CRTNDPDPEGQGFCQAGFSVDFTKEGMLVVGGPGSFYWQGQVMTAGIAEILNGYSLKAVL
RRVPGEKHTRAAEDTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAMINSTNL
TFIHNFTGEQMASYFGYSVAVTDLNGDGTDDVLVGAPLYMEREMETKPREVGRVYLYLQM
APLTFFKPVALTGTHTFGRFGTSIAPLGDINQDGYNDVAVGCPFGGEESGGRVLIFNGNR
DVSTQGLTLSQELRAARTPSGSLAGYGFTLRGGQDLDNNMYPDLIVGAFGAGEVSVYRSR
AVVSVEAAMVLTPRILNPDDRQCHLPQTDIMVTCLKVDVCASVSGVGIPNSVDLRAELQL
DWLKGTRGGVKRVLFLDTQQPQRTGLLKLGHNRPHACLSYTIYLREEEDFRDKLTPISLA
LNYSLVPPTHGQNLPPVLNHYNSTFLQEHAHILLDCGDDDICIPDLQLSASMDHSELVIG
DDNLVMLTITAMNRGEGAYETELHTLIPHEADYIGVTRRLESLSQLNCEYKMVNESRMVV
CDLGNPMVAGTELSVGLRFSVQRLEDAGPKISFELQIRSSNKDNSNSNPVILNLSIVAKA
QLDLRGVSHPSQVVLPFPRWEPKAKPVKEDDVGPQVTHIYELHNSGPSSIREAELQVGWP
SRFRDENLLYAMEIQTDGPISCRTNTSLNPLGLQISTLQDTPELLGFLRNTSASHRHKRA
VNAAESYSGKTLNCTNISCLRIMCIVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYILNS
TVSFMVTAMPYRIQPSTLPQHTTSMGTLVVWGTPDVSFAVPLWVIILAILLGLLVLAMLT
LAMWKCGFFDRSRPPADDDVSDQEQLTCDQTGDA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtgtatgggactctgtttcctctgctgggatgtttattctcgggctgctgtcg
gtgctgtggccatcgttaaatggagtttggagttttaatctttacgcagaggatcctacg
gtttacaggggacccgatggaagttattttggctattctgtggacttctaccaacctacc
tccgacagcaacacgttcagtgtgttggtaggggctcccaaggcgaacacctctcagcct
ggcattgtggaggctggggctgtgtactactgcccctggcctggacacagcgacagctgc
agacagataccttttgataattccaataacagaatgataaaagtaaacggcaccagagag
cctctggagtttaagtcgcaccagtggtttggagcatcagtgaggacacacaaaggaaaa
gtggtggcatgtgctcctctctatcactggcggacagtcaagctgagtggggagaaggac
cctgtggggacctgctatgtggccatccagaacttcagcgcctacgcagagtactcgccc
tgcaggaccaatgatccagacccagagggacaggggttctgccaggctggcttcagtgtg
gatttcaccaaggaaggaatgctggtggtaggaggacctggaagcttttactggcaaggt
caggtaatgacagcagggatagctgagatactgaacggctattctttgaaagcagtgctg
agacgggttccaggagagaaacacactcgagctgcagaagacacacacgatgacagctac
cttggttactctgtggcagtgggagagtttacaggagactctgaacaagagctgatagcc
ggagttcccagaggagcacagaactttggatatgttgcaatgatcaactccaccaatctt
accttcatccataacttcacaggcgaacagatggcctcctattttggctactcagtggct
gtcactgacctgaatggagatgggaccgatgatgtgctggttggagcgcccctctacatg
gagagagagatggagaccaaacccagagaggtggggagggtgtacctgtatctgcagatg
gccccgctcactttcttcaaacctgttgccctcactggcacacacacctttgggcgcttc
ggcacgtctatagcacccttgggagacatcaaccaggatggatacaatgacgttgcggtt
ggttgtccgtttggaggcgaggagagtggaggcagagtattgatttttaatggtaacaga
gacgtatctacgcaaggcctgacactgagccaagagctgagagcagccaggacacccagt
ggcagtttagctggatatggattcactctgagaggaggccaagacctggacaacaacatg
tatcctgatctgatcgtgggggcttttggcgccggcgaggtgtcggtgtacaggtctcga
gccgtagtgtctgtggaggctgcaatggtcttgactcccagaatcctgaaccccgatgac
cgacagtgtcacctgcctcaaacagatatcatggttacctgtctgaaggtagacgtgtgt
gcgtcagtgagtggcgtggggatccccaactctgtagatctgagagcagagctgcagctg
gattggttgaaaggcaccaggggcggagttaagagggttctgttcctggacacccagcag
cctcagcgtacagggctcctaaaattgggacacaaccgcccacatgcatgcctgagctac
accatatacctaagagaggaggaggattttagggacaaattgaccccaatctcacttgct
ctgaactacagcttggttccacccactcatggccaaaaccttccacctgtcctcaaccat
tacaacagcaccttccttcaagagcatgcacacattcttctggactgcggtgatgacgat
atttgtatcccggacctccagctctctgccagcatggaccactccgagctggtgattgga
gatgacaatctggtcatgttgactatcactgcaatgaaccgaggagagggcgcctatgag
acagagctccacacactgataccacatgaagctgactatattggagtgacgcgcaggttg
gagtccctgtctcagctaaactgtgagtacaagatggtcaatgagtccagaatggtggtg
tgtgacctcgggaacccaatggtggctggaacagagctgtctgtcggtttgaggttttct
gtccaaaggctggaggatgccggaccaaagatcagctttgagctacagatccgcagctcc
aacaaagataactccaacagcaacccagtcattttgaatctgtccattgttgccaaagct
caactcgatttacgtggggtgtctcatccctctcaggtggtgctgccattcccacgctgg
gaacccaaagcgaagcctgtcaaagaggacgatgtgggaccacaagttacacacatttat
gagctccataactcaggtcccagcagtattagggaggctgagctccaggtcggctggcct
tcccgtttccgtgatgaaaacctgctgtatgccatggagattcaaactgacggaccaatt
agctgccggacgaacaccagcctcaacccacttggccttcagatttccactctccaggac
acacctgaattattgggtttcttgaggaacaccagcgcttctcatcgccataaacgagcc
gtcaatgctgctgagagttatagcggtaaaactttgaactgcaccaatatctcatgtctg
aggatcatgtgtatcgttggccggttggatcgtgggcagagcgccgtggtcaagatccgc
tcgagactctgggctcacacttttctgcagcggcgtaatgacccctacatcctcaactct
actgtatccttcatggtcacagccatgccttaccgcatccaaccctccaccctgccgcaa
cacaccacatcgatggggaccttggtggtatgggggactcctgacgtgtcatttgctgtt
ccgctttgggtcatcatcctggccatactgctggggctgctggtgctggccatgctaaca
ttagccatgtggaagtgtggtttctttgaccggtcgcgtccaccagctgacgatgacgtc
tccgatcaggagcagctgacatgtgatcaaacaggggacgcctag
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