Etheostoma cragini (Arkansas darter): 117946698
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Entry
117946698 CDS
T07493
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117946698
04812 Cytoskeleton proteins [BR:
ecra04812
]
117946698
Cilium and associated proteins [BR:
ecra03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
117946698
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
117946698
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_LRWD1
LRR_NXF1-5
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
117946698
NCBI-ProteinID:
XP_034730901
LinkDB
All DBs
Position
1:complement(29426705..29463038)
Genome browser
AA seq
809 aa
AA seq
DB search
MEPTESKTMRSQKHNSVNDRWVCLTPMVNSCKLHLTTVKSLERAQRMTDSQDVVNEKNTN
TGQTINYSNPENRLRACRRLAQTPLVPSFVFYSTDSAVHNLVPLACGAQSGLDAVSHVTQ
DARGKSRRPTNRPGATYYRNALNLAKQAGGSGGYKYNEVPGIPFTRLPCDSFASHVQRID
LDRRCLEECPQLGPMYELQLLNLQHNLITRIHHLSHLQQLVFLNLYDNHISEMTGIEYLS
SLRILMLGKNRIHKICCLESLSNLTILDLHDNQICRIENISHLIELRVLNLAGNNISRVE
NMQGLNCLTELNLRNNCISVVTEVYRLPCLQRLFLSCNNITSFDQLACLGESHSLSELTL
DGNPVALETWYKQAVLRCVLHLRQLDMKRITDEDRRMAGVQARKEEEKKRESHKQTIHKE
KRRLAIRNAAQQWEGGRSCLELPPANGAKEEVSPESSPAHSPAQTNGLAQEPSPDEPRRI
SPGSGPERPSGGTESRFRTNSRPNSPRDPKLVEAGSGSIQSLSLSDSHLAELDGDTLRLF
GTGALEALERGWGVQTAGAVTVITFRYINFDAIVPTLPRIRIKFPNLSHLIFLETNISRL
PQLAALTQVRRLDQLTIHPEGNPVVSLALWRSFLLYRLHHFNLQKINGQEVTMNDVIAAV
RVFGTLGHIAATETPRCRLLLLLEESRKRQLQFLLEGRGRRAGLSPEELRDNGKLLGEGL
SRALFNYPSRDCSAESPEEGTVESSERAAMIEQYLQELVQRASDTNLKGEALHKLWPSMF
AEMVRDCVLEMRDRAAFRQASLARISETK
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaactgagagcaaaacgatgcgatctcagaaacacaacagtgtcaacgataga
tgggtgtgtctcacccccatggtcaacagctgcaagttgcaccttacaactgtcaagtca
ctagagagagcccagaggatgactgactcccaagatgtagttaacgaaaaaaatacgaat
accggccaaacaattaattattcaaacccagaaaacaggttgcgtgcttgcagaagactt
gcccagacacctctggtgccatcatttgtcttttactcaacagattccgctgtgcataat
cttgtaccactagcgtgtggtgctcaaagtggtttggatgcggtatcacatgtaacacaa
gacgcaagaggcaaatctaggagaccaaccaacaggccaggggccacttactaccgcaat
gcgttaaaccttgctaagcaagcaggtggttctggaggatataaatacaatgaagtccct
ggtattcccttcactcgattgccctgtgacagttttgcatcccatgttcaacgaattgac
ttggacaggcgctgtctggaggaatgcccccagttgggccctatgtatgaactacagctt
ctcaacctccagcacaatctaatcacaaggatccatcatctgtcacatctgcaacagctt
gttttcctgaacctttatgacaatcacatttctgaaatgactggcattgaatatctaagc
tctcttaggatcctcatgctggggaagaacagaatccataaaatatgctgtttggaaagc
ctgtccaatctgactatcctggatctgcatgacaatcagatctgcaggatagaaaacata
tcacacctaattgagctgcgagtgttgaacctggcaggaaataacatatccagagtggaa
aacatgcagggcctcaactgtttgactgaactcaacctacgaaacaactgcatctctgtt
gtgactgaggtgtaccgcctgccctgcttgcagcgcctctttctcagctgcaacaacatc
accagttttgatcagctagcctgccttggagagtcacactccctttctgagctcaccctg
gatgggaatcctgtagccctggagacatggtacaagcaggccgtcctgcgctgtgtgctt
catctgagacagctggacatgaagcgcatcacagacgaggatcggcggatggctggtgta
caggctcgaaaagaggaggagaagaagagggagagtcacaagcagaccattcataaggag
aagcggcgtctggcaatccgtaatgcagcacagcagtgggagggcggcagatcctgcctg
gaactgccacccgctaatggtgctaaagaagaagtcagtccagagagcagccctgcccac
agccctgcgcagaccaatggccttgcacaggaaccatctccagatgaacccaggcggata
agtccaggttcaggaccagagcgaccatcagggggaacggagagcagatttcgcaccaac
agccgtccaaacagcccacgagatcccaagcttgtggaggcagggagcggcagtattcag
agcttgtccctctctgacagtcacctggcggagctggatggtgacacactgcggttattt
ggaaccggagccctggaggccctggagaggggctggggagttcagactgctggtgctgtc
actgtaataaccttccgctacatcaactttgacgccattgtaccaacactgccacgaata
aggatcaagttcccaaatctatcgcacctgatcttcttggaaaccaacatcagccgtctg
ccccagctggctgccttgactcaggtgaggcgtctggaccagctgaccatccatccagag
ggcaacccagtggtcagtctggctctttggcgctccttcctcctctaccgcctccaccac
ttcaacctgcagaagatcaacggccaggaggtcaccatgaatgatgtgatcgctgcagtg
cgtgtgtttgggacactgggtcacatagcagccaccgaaactccacgttgccggctcctc
ctgctgctagaggaatccaggaagcgtcagctacaattcctgttagagggacgtggcagg
cgggcaggactgagtccagaggagctgcgagataatgggaagctcctgggagaaggcctg
agcagggcgctgttcaactacccaagcagagactgcagtgcagagagccctgaggagggc
actgtggagtcatcagaacgtgctgctatgatagagcagtacctacaggagttggtccaa
agggcatcagacaccaatctgaagggtgaggcacttcacaagctctggccctccatgttt
gctgagatggtgagggactgtgtgttggaaatgagggaccgagcggccttccgccaagcc
agccttgcgaggatctctgagaccaagtga
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