Etheostoma cragini (Arkansas darter): 117946762
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Entry
117946762 CDS
T07493
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117946762 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117946762 (cstf3)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
117946762 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
117946762
NCBI-ProteinID:
XP_034731020
LinkDB
All DBs
Position
1:22098406..22110070
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AA seq
716 aa
AA seq
DB search
MATEGAADQAAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVT
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKYEKV
HSIYNKLLGIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDLRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSTS
ELKALGYKDVSRAKLAAMLPETVVTPSAPSLKDEADRKPEYPKPDTNQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVLLMKLLPPPTCFTGPFVQVDEIMETFRRCTLPETVDAAVELIT
GRQPDAGGEGNGSMENHAVAKSLKRPNADSDEEDDKGAVAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgaaggagcagccgaccaggcagcggcagaatatattccagagaaggtgaag
aaggcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaaccaacccatagataaagcaaggaagacgtatgagcgacttgtcacg
cagttcccaagttctggcagattctggaaactgttcattgaagctgagatcaaggcaaaa
aactatgacaaggtagaaaagttgtttcagagatgcctaatgaaagtcttgcacatcgac
ctctggaaatgttacctctcatatgttcgagagaccaaagggaagctgcccagctacaaa
gagaagatggcccaggcgtatgacttcgctctggataaaattggcatggaaattatgtct
tatcagatttgggtggactacatcaacttcctcaaaggagttgaggcggtgggctcgtac
gcagagaaccaaagaatcactgcagtacggcgggtgtaccagagaggctgtgtgaaccct
atgatcaacattgagcagctctggagggattacagcaaatatgaggagggaataaatgtg
cacttggccaaaaagatgattgaggaccgaagtagagactacatgaatgccaggagagtg
gcaaaggagtatgagactgtgatgaaggggctggacaggaatgcaccatcagtaccgccc
cagaactcccctcaggaagcccagcaagtggaaatgtggaagaagtacatccagtgggaa
aaaagcaacccgctgcgcacagaagaccagaccctcatcacaaagagagtgatgtttgcc
tacgagcagtgcctgctggtgctgggccaccatcctgacgtttggtacgaggcagcacag
tacctggagcagtccagcaaactgctggcagagaaaggggatatgaataattccaagctg
tttagtgacgaggcagctaacatctacgagcgtgccatcgggacacttctgaagaagaac
atgctgctgtacttttcatttgcagactatgaagaaagtcgcatgaagtacgagaaggtc
cacagcatctataacaaactgcttggcattgaggacattgaccccacgctggtctacatt
cagtacatgaagtttgccaggagggcagaagggatcaagtcaggtcgcaccatcttcaaa
aaagccagagaggatctacgcacgcggcaccatgtgtatgtgacggcagcactgatggag
tactactgcagcaaggataaatcggtagccttcaagatttttgaacttggtttgaagaaa
tacggggacattccagagtacatactggcatacattgattacctctcacaccttaatgag
gataacaacaccagggtactgtttgagcgcgtcctcacctcaggaagcttgtcgccagaa
aagtccggcgagatctgggctcggttcctggcttttgagagcaacataggagacctggcc
agtatcctgaaagtggagcgcaggcgtttcactgccttcaaggacgagtatgagggcaaa
gaaacagccttgctggtagatagatacaagttcatggatctgtatccctgctctactagt
gaacttaaggcccttggatataaggatgtgtcgcgggccaaactggcagcaatgctccca
gagactgtggtgacgccctctgcaccttcactaaaggatgaagctgaccgaaaaccagag
taccccaaacctgacaccaatcagatgatccccttccagccacgccatcttgcccctcct
ggtttacaccctgtccctggtggagttttcccagtccctccagctgctgttctcctaatg
aagctgctccctccgcctacgtgcttcactggaccctttgttcaagtggatgagatcatg
gaaacattcaggagatgcacacttcctgagactgttgatgctgctgtagagctgatcact
ggaagacagcccgatgcaggaggagagggtaatggatccatggagaaccatgctgttgcc
aagtcactcaagaggcctaacgcagactccgatgaggaggatgacaaaggagctgtggct
ccgcccatacacgacatctaccgtgcacgccaacagaagaggattcgataa
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