Etheostoma cragini (Arkansas darter): 117946788
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Entry
117946788 CDS
T07493
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117946788 (irx4a)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117946788 (irx4a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
117946788
NCBI-ProteinID:
XP_034731053
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All DBs
Position
6:11712683..11719436
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AA seq
479 aa
AA seq
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MSYPQFGYPYSSAPQFLMTTNSLTTCCESTGRSIAESGVAASGQTPVYCPVYESRLLATA
RHELSSAAALGVYGSPYTGSQGYGNYVTYGTDASAFYSLGPFDTKEATASAHAGITQATA
YYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYEDDEDGSQEEQIKSENNEDET
RSRPDKDLQLSDLDDFDTLESESSECELKHRYHMNTHMSTTGDCPAEHLIKDASLKISLP
VSLGGEQDLSKSCLKTSPEDFHADSRQSAKACYNQQQQQQQEQHGHQILDGKPRIWSLAQ
TATSLNQTEYPSCMLRCQPPPSSLTPSPAATSPVTGLDNRHDSPVTTLRNWVDGVFHDPL
FRHSTLSQALTNTTVSWTTNTKGAVLEAERSAAALQQHQDSPKDSATSFPKTINKLFCS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatatccttattcgtctgctccacaattcctgatgacaacc
aactctctgaccacttgctgcgagtccaccggcagatccatagccgagtccggagtagca
gcgtccgggcagacaccagtctactgccccgtgtatgagagccggctgctggccacggcg
agacatgaactcagctcagccgccgcgcttggcgtgtacgggagcccctacaccggcagt
cagggctatgggaattacgttacatacggcacggacgcctcggctttctactcgctgggc
ccattcgacactaaagaggccacagcttctgcgcatgcgggaataacccaggcaacagcg
tactatccttatgatcctacattgggacagtatcagtacgacagatacggttccatggat
gggggaacgaggcggaaaaacgccacacgcgagacaaccagcaccctgaaggcctggctg
caggaacacaggaagaacccgtacccgaccaaaggggagaagatcatgctggccatcatc
accaagatgacgctcacgcaggtctccacatggttcgccaacgccaggaggaggctgaag
aaggagaacaagatgacgtggccgcccaggaacaagggctcagaggagaaaagatacgaa
gatgatgaagatgggtctcaggaggagcagataaaaagcgagaacaatgaagatgagacc
agaagtcggcctgataaggacctccagttgagcgacctggacgacttcgacacgctggag
tctgagagctctgagtgtgagctgaagcatcgataccacatgaacacacacatgtcaacg
acgggcgactgccccgccgaacacctcatcaaggacgcgtctctgaaaatctccctccca
gtttctctgggaggcgagcaggacttgagtaaaagttgtctgaaaacgagcccggaggat
ttccatgcggacagcagacagtcggcaaaggcgtgttacaaccaacagcagcagcagcag
caggagcagcacggccaccagatattagacggcaagcctcggatctggtctttggcccaa
actgcgacctccctaaaccagactgagtacccgtcgtgtatgcttaggtgccagccgccg
ccctcctccctcaccccctcgcccgccgctacctcacccgtgaccggcctggacaacagg
catgactcgccggtcacgaccctgagaaactgggtggacggggttttccacgaccccttg
ttcaggcacagcactttgagccaggctctgaccaacaccaccgtctcttggaccacgaac
accaaaggcgccgtcctggaggctgagaggagcgcggcggccttgcagcagcaccaagac
tcccccaaagacagtgccacgagcttcccaaaaactatcaacaaacttttctgctcgtaa
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