Etheostoma cragini (Arkansas darter): 117946810
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Entry
117946810 CDS
T07493
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117946810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117946810
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117946810
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117946810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-RING_4
zf-C3HC4_2
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
117946810
NCBI-ProteinID:
XP_034731088
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All DBs
Position
6:complement(15504783..15506368)
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AA seq
407 aa
AA seq
DB search
MTRSPGSPSRGSLSPEGILREIQINLLECKVCFEKFSTQQREHRPQNLSCGHVLCLECIR
ALSHPLLRKLECPFCRQLCSVDSTSHCQALSDLQELLLSRSLTSSAPLHGQKASLDLAPG
RTSTPLHLCKAFGGWGTLINPTGIAVLRSSGTIIVVHDGEKRVVVFNPQGRKLHSFGRRG
RASWEVCYPVDVAVTCCGHVVVSDAGDKGVKVFTSTGHHVLTVRNSFQMPWGVDTDSCGH
ILVSDVQAGTLTQVKMDYAHGLALEHLTAISDLQHPKAVACCRVTRNTAVMEHLPDDMYS
PGRHQHTRLRVFTEDFQPLYQTDSFSLTLQSTVRLNMSGMAFNRDGDVIVIDSNQGMVWS
YGKLQNGPALNPLVGDHLIRPVGLVSLINTLIILDSGDHTVKMYSAK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgactaggagtcctggttccccgagtcgtggcagcctgagtcctgaggggattctgaga
gagatccagatcaacttgctggagtgtaaagtctgtttcgagaagttcagcactcagcag
agggagcacagaccacagaatctttcctgtggccatgtactctgtctggaatgcatcagg
gctctgtcccaccctctcctgagaaagctggagtgcccattctgtcgacaactgtgcagt
gttgacagcacctcccactgccaggctttaagtgacctgcaggagctgctattgtcccgg
agtctcacatcctctgctcctcttcacgggcaaaaggcaagccttgacctggccccaggt
cggacatccacacctctgcacctctgcaaagcttttggtgggtgggggactcttatcaac
cctactgggatagctgttttgagatcttcagggacaataattgtggtgcatgacggagag
aagagggtggtggtgttcaatccacagggtaggaagctgcacagttttgggcgaagagga
cgagccagttgggaggtctgttacccagtggatgtggcagtgacttgctgtggtcatgtt
gtggtgagtgatgctggggataaaggtgtgaaggttttcacctccactggacaccacgtg
ttgactgtcagaaattccttccagatgccctggggtgtggatacagacagctgtgggcac
atcctggtctcagacgtccaggccggcacgctgacccaggtaaaaatggactacgctcat
ggtctcgctctggaacatctaacagccatttcagacctgcagcatccaaaagctgtggcc
tgctgtcgggtgactcggaacactgcagtgatggagcatttaccagatgacatgtattca
ccagggagacaccaacacacaaggctaagagtgtttacagaagacttccaacctctttac
cagactgacagtttcagcctgaccttgcagtccacagtgaggctgaacatgtcaggcatg
gcttttaacagagatggagatgtgattgtgattgactccaatcaggggatggtttggagt
tatgggaagcttcagaatggcccagccctgaacccacttgtgggagaccacctcattcgc
ccagttggactggtgtcactgatcaacacgcttatcattctagacagtggagaccataca
gtaaagatgtattcagctaaataa
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