Etheostoma cragini (Arkansas darter): 117946847
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Entry
117946847 CDS
T07493
Symbol
ubr5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117946847 (ubr5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117946847 (ubr5)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117946847 (ubr5)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
HECT type E3
117946847 (ubr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
117946847
NCBI-ProteinID:
XP_034731150
LinkDB
All DBs
Position
6:3538313..3579131
Genome browser
AA seq
2885 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYSYNSHPHLSLLEQATLKQCVVGPNHAGF
LLEDGRVCRISFAVQPDRLELSKPDGSDGSKLSSGSGTGRSSRPGRTSDPPWFLSGSDTL
GRLAGNTLGSRWSSGVNGGSGGAGSGGGAGGGGAGGGSSGGGGGGGGSGGTSGRSSTAAR
DSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELITQAQVVLQGKSRSVIIRELQRT
NLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVIIDADAMFS
EDISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWLDGASFDTER
GSTSREGEPSLDKKSIPVQSPVSLGEELQWWPDKDGVKFVSIGAMFSELVAVSSKGELYQ
WKWSEPEPYRNTQNPSVHHPRVSFLGLANEKITLLSANSIRATVATETNKVATWVDDTLS
TVASKLEHSAQAYPELQGERMVSLHCCALYTCAQLENSLYWWGVVPFSQRKKMLEKARAK
NKKPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVNAGIPKVGLLLESVWNMNDSC
RFQLRSPESLKNMEKTTKTQDIKMESKPELVKTEMGPPPSPASTCSDTSSIASSASLPYK
RRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVKFPGTSSSMSNQ
STAAPTDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCIPEKAEILAVNV
DSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTSNLAFLGQSERNVAIFTAGQESPII
LRDGNGTIYPMAKDCMGGIRDPDWLDLPPINSLGMGVHSLANLPSNSTIKKKAAIIIMAV
EKQTLMQHVLRCDYEACRQYLVNLEQAFLLDQGSQALGALLDHRCDGNRNILHAAVSVCF
PVSNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRTGSSSSRGLRLREM
MRRSLRAAGLGRHESGPSSSDHQDPVSPPIAPPSWVPDPPPMDPDGDIDFILAPAVGSLT
TASTGTSQGPSTSTIPGPSTEPSVVESKDRKANAHLILKLMCDSVVLRPHLRELLSAKDA
RGMTPFMLAVSGRAYPAAITVLEAAQKMAKVGDPGIAEKEDADSVFMEMICPSGTNPDDS
PLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSP
TAYCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNLVTTPNSRGEHILLFLVQTVARQSV
EHCQYRPPRIREDRNRKAANAEDSDMPDHDLEPPRFAQLALERVLQDWNALKSMIMFGSQ
ENKDPLSASSRIAHLLPEEQVYLNQQSGTIRLDCFTHCLIVKCAPDITFIDTLLGTLVKE
LQNKYTPGRREEAVNVTRRFLRSVARVFVILSVEMASSKKKNNFIPQPIGKCRRVFQALL
PYAVEELCNVAESLIVPVRMGIARPTAPFTLASTSIDAVQGSEELFSVEPLPPRPSPDQS
SSSSQTAASYIIRNPQPRRSSQSQPVRGRDEEQDDIVSADVEEVEVVEGVAGEEDHHDDQ
EEQGEENAEAEGQHDEHDEDGSDMELDLLAAAETESDSESNHSNQDNASGRRSVVTAATA
GSEAGSRVSLAFPIFGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDVDQETFLLDEPLER
TTNASHANSAAQAPRSMQWAVRNTPSQRATGSAPSSSSTPAASSTGLIYIDPTNLRRSSA
ISSSAAAAAAALEASNSSSYLTSASSLARAYSIVIRQISDLMSLIPKYNHLVYSQYPAAV
KLTYQDAVNLQNYVEEKLIPTWNWMVSIMDSTEAQLRYGSALSSAGDPGHPSHPLHASQH
SARRERMTAREEASLRTLEGRRRAATLLTARQGMMSARGDFLNYALSLMRSHNDEHSDVL
PVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQMDRKRNREILELGLDNEDSEHENDE
DTNQSSTLQDKDEDPVPAETGQNHPFFRRSDSMTFLGCIPPNPFDVPLAEAIPLADQPHL
LQPNARKEDLFGRPSQGLYSSSYMATKGLAEASMDRNCLEVNMGSSLPSPSQVYHPSSLD
KHAGSCVLISTHSKHHGKVEILPTKMSYSANLKNVMSMETGQRGTENQTLAEQEMETSKP
GPSPHDLAAQLKSSLLAEIGLTESDGPPLPSFRPHCSFMGMMISHDMLLGRWRLSLELFG
RVFMEDVGAEPGSILTELGGFEVKESKFRREMEKLRNLQSRDLALEVDRDRDQLIQQTMR
QLNTHFGRRCTTTPMAVHRVKVTFKDEPGEGSGVARSFYTAIALALLSNDKLPNLDCVQS
VSKGMQASSTCHHDYNSNLMQRLRNRDRERERRSGGLRAGSRRDRDRDSRRQLSIDTRPF
RPSSEGNPSDEPDPLPAHRQALGERLYPRVHAMQPAFASKITGMLLELSPAQLLLLLASE
DSLRARVEEAMELLIAHGRENGADSILDLGLLEAPEKAQQQENRKRHGSTRSVVDMELDD
PDDGDDNAPLFYQPGKRGFYSPRPGKNTEARLNCFRNIGRILGLCLLQNELCPITLNRHV
IKVLLGRKVNWHDFAFFDPVMYESLRQLIRHSQAGEADAVFAAMDLAFAIDLCKEEGAGQ
VELLSGGVNMPVTPLNVYEYVRKYAEHRMLVVAEQPLHAMRKGLLDVLPKNALEDLTAED
FRLLVNGCGEVNVQMLISFTSFNDESGENADKLLQFKRWFWSIVEKMSMTERQDLVYFWT
SSPSLPASEEGFQPMPSITIRPPDDQHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTK
NFGFV
NT seq
8658 nt
NT seq
+upstream
nt +downstream
nt
atgacatctatacacttcgtggttcacccgttacccgggactgaggatcagctcaatgac
aggctccgtgaagtctcagagaagctcaacaaatacagctataacagtcatccccacctt
agtctgctggagcaggctacattaaaacaatgtgttgtcggtccaaaccatgccggtttt
ctccttgaggatggccgtgtgtgtagaatcagctttgctgtccagcctgatcgcctggag
ctcagcaaaccggatggcagcgatggttcaaagttgagcagtggttcagggacaggaagg
agctccaggccaggcaggactagtgatccgccctggttcctgtctggctctgacacactg
ggcagactggcaggcaacacccttgggagtcgctggagctctggtgtaaatggaggcagc
ggcggagctggaagtggaggaggagccgggggaggtggagctggaggtggcagcagtgga
ggaggaggggggggaggtggaagcggaggcacgtcgggcaggtcatcaacagcagctcgg
gattcccgtcgccagaccagggtgatccgcacggggagggatcgcggctcgggcctgctg
ggtagccagcctcagcccgtcattccagcgtctgtcatccctgaagaacttatcactcag
gcccaggtagtccttcaggggaagtctaggagtgtgatcattagggaactccagaggacc
aacctggatgtcaacctcgccgtcaacaacctgctgagccgggacgacgaagatggagat
gatggagacgacacagccagcgagtcctacctccctggagaggacctgatgtccctgttg
gatgcagacattcactcggctcatcccagtgtgattattgatgctgatgccatgttctct
gaggacatcagctactttggctacccctcttttagacgctcctcgctgtctcgcctggga
tcctccagagttctccttcttcccttagagcgcgactccgagctgttgcgtgagcgcgag
tctgtgctgaggttacgcgagcgccggtggctggatggggcctcgttcgacaccgagcga
ggctccaccagtcgcgagggcgagcccagcttggacaagaagagcatcccggtccagagc
cctgtctccttgggagaggagctccagtggtggcctgacaaggatggcgtgaagtttgta
agcatcggagccatgttctcagaactggtggctgtcagctccaaaggagagctctatcag
tggaagtggagcgaacctgaaccctacaggaatacacagaatccttcggttcatcacccg
cgtgtatccttcctgggcctggccaatgagaagatcaccttattgtctgccaatagcatt
agagccactgtagctacagagaccaataaggtggcaacctgggtggatgacacactgagc
acagtggcctctaagctggagcacagtgctcaggcctaccctgagctgcaaggggaacgt
atggtgtccctgcactgctgtgccctctacacgtgtgcacagttggagaatagcctctac
tggtggggtgttgtgccttttagtcaacgaaagaagatgcttgaaaaggccagagccaag
aacaaaaagccaaagtccagcgctggcatctcctcaataccaaacatcactgtgggaaca
caggtgtgcttgaggaataaccccctctaccatgccggtgcagtggccttttctgtcaat
gctggcattcccaaagtgggcctcctgttggagtctgtctggaacatgaacgacagttgc
aggttccagctgcgctcaccagagagcctcaagaacatggaaaagaccactaagacccag
gatatcaagatggaaagcaagccagagctggtgaagactgagatgggtcctcctccctcc
ccagcatctacctgcagtgatacctcttccattgctagcagtgcctcactgccctacaag
cgaaggcgttctaccccggctcccaaagaggaggagaaggtgaatgaggagcagtggcct
ctcagggaggtggtgtttgtggaggacgttaaaaatgtccctgtgggaaaggtgcttaaa
gtggatggcgcgtatgttgcggtgaagtttccagggacatcaagcagcatgagcaaccag
agcactgctgcacccactgactctgacccatcatcgctgttgcaggactgtaggctactc
agaatagatgagctgcaggtggtcaaaactggtgggactcctaaagttcccgattgtttt
cagcgcacacctaaaaagctctgtatcccagaaaaggcagagattctggccgtgaatgtt
gactccaaaggagtccacgcagtgctgaaaactggtaactgggtgaggtactgtatcttt
gacctggccacaggcaaagctgaacaggagaataacttccccaccagtaacctggccttc
ctgggccagagtgagcgcaatgtggccatctttactgcaggacaggaatctcccatcatc
ctacgagatggaaatggcacaatctaccctatggctaaagactgcatgggtggtattcga
gaccctgattggttggacctgccgcctataaacagcctaggaatgggggtgcactctctg
gccaatctaccctctaactccacaattaaaaagaaagctgctattattattatggctgtc
gagaaacagacgctgatgcagcatgtgctgcgttgtgactacgaggcatgtcggcagtac
ctggtgaacctcgagcaggcgttcctgttggatcagggcagccaggccctcggagccctt
ctggatcatcgctgtgatgggaaccgcaacatcctccatgctgctgtctccgtctgcttc
cctgttagtaacaaggaaaccaaagaggaagaagaagcagaacggtcggagagaaacaca
tttgcggagcgcctctcggctgtggaggcaattgccaatgccatctcagtggtttcaagc
aatagttctgggaataggaccggctcctccagcagcagagggcttcgtctgagggagatg
atgcgtaggtctctaagagcagcaggtctcggccgtcatgagtccggcccttcatccagc
gaccaccaggaccctgtgtcgccacccattgcccctccaagctgggtccctgacccccca
cccatggaccctgatggtgacattgacttcattctagcaccagctgtgggttcactcacc
actgcctccactgggactagccagggacccagcacctccaccataccagggccgtccact
gagccgtctgtggtcgaatctaaagaccgaaaggccaacgcccaccttatcctgaagctg
atgtgtgacagtgttgttctgaggccgcacctccgggagctgctctctgccaaggatgcc
cgtggaatgacccccttcatgctggcagtcagtgggagagcctacccggcagccatcact
gtgctggaggctgcgcagaaaatggcaaaggtgggtgacccaggcattgcagagaaagag
gatgcagattctgtattcatggaaatgatttgcccctcggggaccaacccagatgattcg
cccctctatgttctctgctgcaacgacacctgcagtttcacttggactggagctgagcac
attaaccaggatatctttgagtgtcggacctgtggtttactcgagtccctctgctgctgt
actgagtgtgcaagggtgtgtcacaaaggacatgactgcaagctgaagaggacctctccc
acagcatactgtgactgctgggagaaatgtaagtgtaaaacgctgatcgccggccagaag
gctgctcgcttggacctgctttacaggttactcacaaccaccaacctggtcacaacacca
aacagcaggggagagcatatcttactgttcctggtgcagactgttgccaggcagagtgtt
gagcactgtcagtacagaccgccacgcatcagagaagacaggaaccgtaaggctgcaaat
gcagaagactccgatatgccagaccatgacctagaacctccccgctttgctcaactggct
ctggagagggtcctgcaggactggaacgccctcaagtctatgatcatgtttggctctcag
gagaataaagacccacttagtgccagcagcagaattgcccaccttctgcctgaagaacag
gtctacttgaatcagcagagtggcaccattcgccttgactgtttcacccactgcctcatt
gtcaagtgtgcccctgacataactttcatagacaccttactgggtacactagtaaaggag
ctgcagaacaagtacactcctggtcgaagagaggaggcagtcaatgtcaccaggaggttc
ctacgctctgtggcccgggtatttgtcatcctcagcgtggagatggcctcatccaagaag
aaaaacaacttcatcccccagcccattgggaaatgtcgacgggttttccaagccctactg
ccctacgctgtggaggagctgtgtaacgtagcggagtcgctgattgttccggtgcgaatg
ggcatagcgagacctactgcgcctttcactttggccagcaccagtatcgatgctgttcag
ggcagcgaggagctcttctctgttgaaccgctgcctccgagaccttcacccgaccagtcc
agcagttccagccagacagctgcctcttatatcatcaggaacccccagcctcggcgcagc
agccagtcacagcctgtcagaggaagagacgaggagcaggatgacattgtgtcagcagat
gtggaagaggttgaagttgtagagggagtagctggtgaggaagaccatcatgacgaccaa
gaggaacagggagaagaaaatgctgaggcagaagggcagcatgatgagcatgacgaggat
gggagtgacatggagctggatctgctggcagcagctgaaaccgagagtgacagcgaaagt
aaccacagcaatcaggataacgctagcggccggaggagtgtcgtcacggcagccactgct
ggctctgaagcaggcagtagggtgtccttggcatttcctatttttggtgccagcagtgtc
cctgccttcttttcagaggatgactcccagtccaacgactcgagcgactccgacagcagc
agcagtcagagcgacgatgtcgaccaggagacgttcctgttggacgagccgctggagagg
acaactaacgcttcccacgccaacagtgcggcccaggcccctcgttccatgcagtgggct
gttcgaaacacccccagccagagggccactggaagtgctccctccagctcctccacccca
gctgcaagctccacaggcctgatatatatcgaccctaccaacctgcgtcgctcgagcgct
attagctccagtgctgccgcggcggctgcggctctggaggccagcaactccagcagctac
ctgacgtctgccagcagccttgcccgggcctacagcatcgtcatcaggcagatctcagac
ctcatgagtctgattcccaagtacaaccatcttgtctactctcagtaccctgctgctgta
aagctcacctaccaggatgcagtcaacctgcagaactatgttgaagaaaagctgattccc
acctggaactggatggtgtcgatcatggattccaccgaggctcagctgcgatatggctca
gctctgtcgtctgctggagacccgggtcaccccagtcacccactccacgcctctcagcac
tcggctcgcagggagcgtatgacggcccgggaggaggccagcctccgcaccctggaagga
cgcaggagagcagctaccctgctcaccgctcgccagggcatgatgtcggcgcggggcgac
ttcctgaactacgccttatcgttgatgcgctcccacaatgatgagcactctgatgtactt
cctgtgctggacgtgtgctcactgaaacatgtggcctacgtgttccaggctctcatctat
tggattaaggccatgaaccagcagaccactttggacaccccacagatggacagaaagagg
aatcgagagattttggaactgggtttggacaatgaggattctgaacatgagaatgatgag
gacaccaatcaaagttcaactctgcaggacaaggacgaggacccagtccctgctgaaacg
ggtcagaatcaccccttcttccgccgctctgactccatgaccttcctgggctgcatccct
cccaaccctttcgatgtccccctggctgaggccattcctctggcagaccagccccacctc
ctgcagcctaatgccaggaaggaggatctgtttggtcgtccttctcagggcttgtactcc
tcctcctacatggcaaccaaaggcctggctgaggcaagcatggacaggaactgcctggag
gtaaacatgggctcctctctaccctccccctctcaggtataccacccctcttcactggac
aaacacgctggcagctgtgttctaatatccacgcatagcaaacaccatggaaaagttgag
atcctgcccactaagatgtcttactccgccaacctgaagaatgtgatgagcatggaaact
ggccagcggggcactgagaaccagacactagcagagcaagagatggagacatcaaaacca
ggcccttcaccccatgacctcgccgcccagttgaagagcagcctacttgctgagattggc
ctcactgagagcgatggccctccgcttccatcgttcagacctcactgtagtttcatgggg
atgatgatctctcatgacatgctacttggccgctggcgtctgtcactggaactctttggt
cgtgtcttcatggaggatgtcggagctgagcctggatcgatcctcaccgagctgggcggc
tttgaggtaaaagaatccaagttccgtcgggagatggagaagctgaggaacctgcagtct
cgggacctggccctggaggtggaccgggatcgagaccagctgatacagcagaccatgcgt
cagctaaacacacactttggcaggcgctgcacaaccacacccatggcagtgcaccgggtg
aaggtcacgttcaaagacgagcctggcgagggcagcggcgtggcccgcagcttctacacg
gccattgccctggccctcctctccaacgataagctgcccaatctggactgtgtccagagt
gtcagcaagggcatgcaggccagcagtacgtgtcaccacgattacaattcaaatctcatg
cagcgcttgagaaaccgagatcgggaaagagagaggagaagcggggggcttcgagctgga
tctcgtagagaccgagacagagactcaaggaggcagctctccatagacaccaggcctttc
aggccttcgtcagagggaaaccccagtgatgagcccgaccctctgccagcacacagacaa
gccctgggtgaaaggctctacccacgcgttcacgcaatgcaaccggcgtttgccagtaaa
atcacaggcatgttgctggagctgtcccctgcccagctgctgttgctgctggctagtgag
gattctctcagagccagggttgaggaggccatggagcttctcattgcacatggaagggaa
aatggtgccgacagtatattggacctaggtcttttggaggctccagagaaagcacaacag
caggagaaccgtaagcggcatggttcaacccgcagcgtggttgacatggagctggacgac
ccagatgacggggacgacaacgctcctctcttctaccagccgggcaaaagaggcttctac
tcccctcggcctggcaagaacacagaagccaggctgaactgcttccgtaacattggcaga
atactggggttatgtctgcttcagaatgaactgtgtccaatcacgttgaacagacatgtc
atcaaagtgctgcttgggaggaaggtgaactggcatgactttgcattctttgacccggtc
atgtatgagagcctgcggcagctaattcgccactctcaggccggcgaggcagacgcagtg
tttgccgccatggaccttgccttcgccattgacctctgcaaagaggaaggggctggacag
gtggagcttctgtctggcggggtcaacatgcccgtaactcctctcaacgtgtatgagtat
gtgaggaagtatgcggagcacagaatgctggtggtggctgagcagcctctccatgcaatg
aggaagggtttgttggatgtgcttcctaagaacgccctggaggacctgacggccgaggac
ttcaggctgctggtcaacggctgcggagaagtcaacgtccagatgctcattagcttcacc
tctttcaatgatgaatctggggaaaatgcggacaagctcctgcagtttaaacgctggttt
tggtccatagtggagaagatgagcatgactgagaggcaagatttggtgtacttctggacc
tccagcccctctctgccagccagcgaagagggcttccagccgatgccctccatcaccatc
cggcctccagacgaccagcacctcccgacggccaacacctgcatctcgcgtctctacgtg
ccactctattcttcaaaacagattctcaaacagaaactcctgctagccattaagaccaag
aattttggttttgtgtag
DBGET
integrated database retrieval system
