KEGG   Etheostoma cragini (Arkansas darter): 117946848
Entry
117946848         CDS       T07493                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117946848
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ecra01009]
    117946848
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecra03021]
    117946848
Protein phosphatases and associated proteins [BR:ecra01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117946848
Transcription machinery [BR:ecra03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117946848
    Little elongation complex (LEC)
     117946848
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing
Other DBs
NCBI-GeneID: 117946848
NCBI-ProteinID: XP_034731163
LinkDB
Position
1:25769428..25791422
AA seq 608 aa
MASLRQEHQYGLSCEKNNKNSPNRTLYHVKLTDTAIRALEAYQNLKGSLPSEPSICFKGN
QGYIKIPTPTPESPSALRVFTFYLSSDSKDQPQASFDCIHQYVSSDGREQLEGQGIIQDK
ITVCATDDSYQMTRDRMSQVEKDSWSRSAIEIKPGATHPSKCVKFHKRSAPLSASDSSFP
KHSTNNRRNGGILTPTLKSLRERIIHLLALKPYKKPELLLWLERERAGPKDKVELGAILE
EVAKVNPKDSSYLLRDDFYKHVQRDWPGYSEEERQLISRLLARKLQPHINHQSRNPQAHV
SMLKASEDTTLHHSTAKTHAVKRLVPFDSLERLAVKRQRLVDQRLQQPPTVNGLLNNKGH
EIAAPTLNPGFHTKTEFQRTSNHTGNQNGLPEDHNGFPVMHKLSSITDTPVSERREQEPN
GSNYQPPQGDSDCTYQQLANSQHRKKKSKKHKDKERVWLKDNKGSEWLETSPDLKQNPDK
LEDPEITNAVASEEKPDYVLTYGTIMSLEQRERYHEDFCGEYDEYKDLHSRIATITHMFV
QLGTKIKSLSPGTQEYKIMEEQILEKYNKYRKKFPGYREEKKRCEYLHEKLSYIKQLISD
YDVSHASS
NT seq 1827 nt   +upstreamnt  +downstreamnt
atggcttcgctcagacaggagcaccagtacgggctctcctgtgaaaaaaataacaaaaac
agcccgaacaggacgctgtaccacgtcaagctcacggacacggctatcagggcgctggag
gcttaccaaaacctcaagggatctttaccaagtgaaccatcaatctgtttcaaaggaaac
caagggtacatcaagatcccaacacccacaccagagtcaccttccgctcttcgtgtcttc
accttctacttatccagcgacagcaaagaccaacctcaagccagctttgactgcatccat
caatatgtttcaagtgatggccgtgagcagctggaaggtcaaggcatcatccaggacaag
atcactgtgtgcgccaccgacgactcctaccagatgacccgtgataggatgtctcaggtg
gagaaagacagctggagccggtctgccattgagattaaaccaggagccacacatccaagt
aaatgtgtcaagttccacaagaggtcagctcctctgtctgcatcagacagcagcttccct
aagcattctaccaacaaccggaggaacggcggaatcctaacgccgaccctgaagtcctta
agggagcgtatcatccacctcctagctctcaaaccctacaagaaaccagagctgctgctg
tggctggaaagagaaagagccggccctaaggacaaggttgagctgggtgccatactagag
gaggttgcaaaagtaaatcccaaagacagcagctacctgctgagggatgacttctacaag
catgtgcagagggactggcccggctacagcgaggaggagaggcagctgatcagcaggctg
ctggccaggaagttacagccacacatcaaccaccaatcaaggaatcctcaagcacatgtg
tctatgctgaaggcctcagaggatacgacattacatcacagcacggcaaaaacgcatgca
gtgaaacgtctcgtgccttttgactcactggaaaggctagctgttaagagacaaagactt
gtggaccagagattgcaacagccgcccacagtaaatggactcttaaacaataaaggacat
gaaattgcagctcctacccttaaccccggtttccacacaaagactgagtttcaacggaca
agtaaccatactggtaaccaaaatggcttaccagaagaccacaacggctttccggtaatg
cacaaactgtctagcatcactgacacacctgtctcagaaagaagagagcaagaacccaac
ggaagcaactaccagccaccacaaggcgactctgactgcacttaccagcagctcgccaac
agccagcacaggaagaagaaatcaaaaaagcacaaagacaaggagcgggtgtggttaaaa
gacaacaagggcagtgaatggttagagacgagtcctgatctgaagcagaacccggacaaa
cttgaggatcctgaaatcacaaatgctgtggcctctgaggagaagccagattatgtgctc
acatacggcaccatcatgagtttggagcagcgtgagaggtaccatgaggatttctgtggc
gagtatgatgaatacaaagacctccactcccggattgccaccataactcacatgtttgtt
cagctaggaaccaaaatcaaaagcttgtctcctggcacgcaagaatataagataatggaa
gagcaaatactagaaaagtacaacaagtatcgaaagaagttcccaggctacagggaagag
aagaaacgctgcgaatatctccatgagaaactgtcctacatcaaacagctcatcagtgac
tatgatgtctctcacgcttcttcatag

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