Etheostoma cragini (Arkansas darter): 117946954
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Entry
117946954 CDS
T07493
Symbol
scap
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein isoform X1
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117946954 (scap)
Membrane trafficking [BR:
ecra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117946954 (scap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_CDC20-Fz
WD40_Prp19
Patched
WD40_WDHD1_1st
WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
117946954
NCBI-ProteinID:
XP_034731372
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All DBs
Position
6:26065894..26108374
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AA seq
1358 aa
AA seq
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MFPLLPGGRGEQSHTLPESRREHYVNHKAPLTLKKPNAGAFKGRKRLRAREIAWSILSRS
LDAPRHTVLGRAVLPNGWQLTPPTRMTLREQLREKISAAFYRHGLLCASYPVPIILFTSA
SILTCCYPLLRLPLPGTGPVEFTTGVRDYSVPSHEPQGDLGERPDWYRGPPVAYIQQVLV
KAAVSPWDTSLVTVDVFRLPLGRAFSLLEEIRNHVHSDSSGKHSLETLCLQVTDLFPGLR
RMQSVLPEHGCLLVSPGNYWQNQRELFDSDPDLLKTIQKHEPKGLHTSATLRDLLFGVPG
KYTGVSHYNKKKVVTYTITLVLSRYDARFLGSLRARLKHLHPSANCSLRDDHMVHVHFKE
EIGIAELIPLVTTYIILFAYIYFSTRKIDMVKSKWGLALAAVVTVLSSLLMSVGLCTLFG
LTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSNESWSIMKNMAT
ELCIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQMFFFTTVLSIDIRRMELADLNRRLPA
EAGLPPPKPGPLRTREAPPPPRHSPHTITLQTPAFRNLRLPKRLRVVYFLARTRLAQRII
MAGTVIWIGILVYTDPAGIRTYLAAQVSEQSPLGDPGGGGLPPHLGVAPVFRGGDPTSTL
GINPAPAPTPIPDNQSQGHHGSSRVGPFPQVPPPAVPQITWGADDEEGWRRLSFRHWPSL
FSYYNITLAKRYISILPVIPVTVHLSPQEAIETRHPQDTRHPPPSIPKVAADIQTDLTLY
KVAALGLAAGVLLVLLLFCLYRVLCPRNYGQNGVTHGRRRRGDLPCDDYGYSPPVSEISP
LLLRGHSMDIECLASDGMLLASCCLAGQIRVWDAQTGDCLTVIPNHRLRRSSSSGCWEQR
DGWDSLSGAGETECLGSEAYGSSISGDGLSEGEGYPLRRRTAPSRPALFTDQPDLTPLID
TNFASQPPSHLCTPPREGFDFGGLVERAYMEHEPPSPSAYPSPSSASSSPPSGAQLQRRP
SLGDSAAFLNQDRASTAGTQATADWESSVWAMELRGNLIAAGRSSGKLELWDAVEGSLRC
INEDGVSGITALAFLNNRIVAARLNGSLDFFTVEINKPLGLLQYRGAPGRGSLPPSTCYS
SEDVISCQLTRSVQCAHQKPITVLRAAAGRVVAGSQDHTVRVYRLEDSCCLFTLQGHSGG
ITAIYIDQTMVLASGGQDGAICLWDVLTGSRVSHVYGHRGDVTSLVCTTSCVISSGLDDL
ICIWDRSTGIKLYSIQQEVGCGASLGVISESLLVTGGQGCVSFWDLNFGDLLQTVYLGQS
SDGQGVRQLLVLDNAAIICDFGSELSLVYVPSVLEKLD
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgttgctccctgggggacgaggggaacagtcacacactctgcctgaatcaaga
agggagcactacgttaaccacaaggcaccacttacgcttaaaaaacccaatgctggtgct
ttcaagggacgtaaacgactccgagccagagagatagcctggtctatccttagcaggtcc
ctggatgccccgcggcacaccgtcctcggccgcgcagtgcttcccaatggctggcagttg
accccgcccaccaggatgacgctgcgcgagcagctgagagagaagatctcggcggccttc
taccgccatgggctgctgtgtgcctcctatccagtacccatcatcctcttcacctccgcc
agcatcctcacctgctgctatccgttattaaggcttcccctgcctgggacgggtcccgtg
gagttcaccacaggagtgcgagattacagcgtcccttcccatgagcctcagggagacctc
ggagaacggcccgactggtaccggggtcctccggttgcctacatccagcaggtgttggtg
aaggcggcggtgtctccgtgggacaccagcctggtgacggtggacgtgtttcggttgccg
ctgggtcgagccttcagcctgctggaggagatccgcaaccacgtccactctgacagctcc
gggaaacacagtctggagacgctgtgtctccaggtgacagacctgtttccgggcttacgg
cggatgcagtcagtcctgccggagcacggctgcctgctcgtttctcccggcaactactgg
cagaaccaacgggagctgtttgactcagaccccgacctcctcaagaccatccagaaacat
gaacccaaaggcctgcacacctcggccactctgcgagacctgctcttcggtgtccctggg
aagtacactggggtcagccactacaacaagaagaaggtggtgacgtacactataacttta
gtgctgtcccgctacgatgcaaggttcctgggcagcctgcgggcgcgtctgaagcatctc
cacccgtcagccaactgcagcctgagagacgaccacatggttcacgtccacttcaaagag
gagatcggcatcgctgagctcatccccctcgtcaccacatacatcatcctttttgcctac
atctacttctccacacgaaagattgacatggtgaagtctaagtggggtctggctctggct
gctgtggtcacagtcctcagctctctgctcatgtctgtgggactgtgtacgctgtttgga
ctgacacccacgctcaatggaggggagatctttccttatctggtagtggtgatcggcctg
gagaatgtcttagtcctcaccaagtccgtggtgtccacccccgtggacctcgaggtcaaa
cttcgcatcgctcagggtctcagtaatgagagctggtctatcatgaagaacatggccact
gaactgtgcatcatcctcattggatatttcactctggtgccagctattcaggagttctgt
ctgtttgctgtggtgggcctggtgtctgacttcttcctgcagatgttcttcttcaccaca
gtactatctatagacatccgacgcatggagctggctgatttgaaccgccgcctgccagcc
gaagcaggactcccgccccccaagcctggcccgttgcggacacgcgaggccccgccgccc
ccgcggcactccccccacacaattacactgcagaccccggctttcaggaatctaaggctt
cccaagaggttgcgtgtggtgtacttcctggcccgcacgcgcctggctcagcgcatcatc
atggctggcacggtgatctggatcggcatcctcgtctacaccgacccagctggcatacgc
acctacctggctgcacaggtgtctgagcaaagccctctgggagatcccggaggaggtggt
ctgccccctcacctcggggtggcccccgtctttcgtggaggcgatcctaccagtaccctc
ggcatcaaccccgcaccagctccaactcccatacctgataaccagtcacagggccaccac
ggctcctccagagtggggcccttcccacaggtcccgcctcccgccgtgccccagatcacc
tggggagcggatgacgaggagggctggaggaggctctccttcaggcactggccatcgctt
ttcagctactacaacatcactttagctaagaggtacatcagcatcctgcccgtcattccc
gtcaccgttcacctgagcccccaggaggccattgagacgcgtcacccgcaggacacaaga
caccccccaccatctattcccaaggttgctgcagatatacagacggacctcactctctac
aaggtggcagctctgggcctggcggcgggcgtcctgctggttcttcttctcttctgtcta
taccgggttctctgcccgcgtaattacggccagaacggcgtcactcatgggcgcaggcgc
cgaggggacctgccctgcgacgattacggctactcaccacccgtcagcgagatctcacca
ctgctgctgaggggccacagtatggacattgagtgtttagccagtgacgggatgctgctg
gccagctgttgcctggcaggacagatccgggtctgggacgcccagactggcgactgtttg
accgtcattccaaaccacaggctcagacggagcagcagcagtggctgctgggagcagcgg
gacggctgggacagcctgagtggagccggcgagacggagtgtttaggctctgaagcttac
ggctcctccatcagtggtgacggcctatcggagggagagggctacccgctgagacgccgc
actgctcccagccgcccggctctattcaccgaccagcccgatctcaccccgctcattgac
accaacttcgcctcccagcccccctcccacctctgcaccccgcccagggaaggctttgac
tttggaggactggtggagcgcgcctacatggagcacgagcctccctcgccttccgcctac
ccctctccttcctcagcctcatcctcgccgccgtcaggagctcagctccagagaagaccc
agtttaggggattcagccgccttcttaaaccaagacagagcctccacagcggggacacag
gcgacggcagactgggaaagctctgtctgggccatggagctgagagggaatctaatagct
gctgggaggagcagcggtaaactggagttgtgggatgcagtggaggggtcgttgcgctgc
attaatgaagacggagtctctggaatcacagccctagccttcctcaacaacagaatcgta
gcggctcggctcaacgggtctctggatttcttcactgttgagataaacaaacctctgggt
cttctgcagtacagaggagcccctgggcgaggcagcttgcctccctctacctgttacagc
agcgaggatgtaatcagctgccagctcacacgctcagtacagtgcgctcaccagaagcca
atcacggtgctgcgagccgccgccgggagggttgtcgccggcagccaggaccacactgtc
cgggtttatcgtctagaggactcgtgttgcctcttcaccctgcagggtcactctggaggg
attacagccatctacatagaccagacgatggttctggcaagcggtgggcaggatggcgcc
atctgcctgtgggacgtcctgacagggagtcgtgtcagccatgtttacggtcatcgtggg
gatgtcacctcgctggtctgcaccacctcttgtgtcattagctcgggactggatgacctc
atctgtatctgggaccgcagcaccgggatcaaactctactcaattcagcaggaggtgggc
tgtggggccagtctgggagtgatctccgagtctctcctggtaacggggggccagggctgc
gtctcgttttgggacctgaacttcggtgacctgctgcagacggtctacctgggccagagc
agtgacggacagggcgtccggcagctgctggtgctcgacaacgccgccatcatctgcgac
ttcggaagcgaactcagcctggtgtacgtgccatctgtgctcgagaaactagactaa
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