Etheostoma cragini (Arkansas darter): 117947092
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Entry
117947092 CDS
T07493
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117947092 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117947092 (lamb2l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
DUF7310
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
117947092
NCBI-ProteinID:
XP_034731574
LinkDB
All DBs
Position
7:complement(24933650..24985372)
Genome browser
AA seq
1953 aa
AA seq
DB search
MGPTCFCFPGTVVYAGDTWGSTSSRRFELSLLYRCRPVTEPIQPVLDGACRGVCVCVCER
GREGERKREGEGLCVTERKGESQKTTEQPERQPDVHASRHHDVHHGSVSEPPHAGASYRR
EMPQALSVFGQELPSSPHGCTDGSCYPATGNLLIGRAVNLSATSTCGLNGPQPYCIVSHL
QESDKCFECNSQHRFDPYRHRNSHRIENVIYLMDGNGDNTWWQSVNGEESVSIRLNLEAE
FHFTHLIIKFKTFRPAAMFIERSADFGRTWRPYRYFASNCTKTFPGIPANGLHHINDIIC
EERYSDIEPSTNGEVIYKVLDPAIHVKDPYSLDIQELLRITNLRINFTKLNTLGDDLLDR
RFDVLQKYYYAIYELVVRGSCFCYGHASECAPVPGVDARENGMIHGRCVCKHNTEGLNCE
RCRHFHNDLPWRPAEAENPHTCRECNCNGHSSHCHFDMAVYLATGNISGGVCDDCQHNTM
GRNCEMCKPFYYQDPNRDVRDPQACVACDCDPVGSMEGGVCDSHTDLDVGMISGQCRCKA
NVKGTRCDDCKESYYGLSQNDPLGCQPCNCDPRGIIMMGAPCDQISGDCSCKRYVTGRYC
NQCLPEYWGLSNDLAGCRPCDCDFGGAYNNRCMMESGQCDCRRHLIGRQCSEVQPGYFCA
PLDYYKYEAEDATGHSPSDSPLPGKVRPQAETDCVQHLSNQLRRHRRHRRITNSQQHRAA
LRRIRQLQQTPDVRTVHREHTPSHMVTWTGPGFARVKDGAGLVFTIDNIPYAMEYDIMIR
YEPESTEDWEAIVSVTSVMLPSSLRCGNLLPTEQLYTVTLPHRNRYIQMPRPFCFEPSNR
YVVSIRFQRHGVTHRHLTAFILIDSLVLIPKYTELPGFQGNEPEAEQRREEMIRYMCLDS
FMITPMPALAEMCSKLICSISSIIHDGALSCQCDPQGSLSGECHKVGGDCHCKPNVMGRR
CDQCTPGTYGYGANGCTVCDCHSEGSLSHQCDPVTGQCQCRHGATGRQCSDCQPGQWGFP
SCSPCQCNSHADICDPRNGECRDCRDYTTGHLCDSCADGFFGNPVLGSGDHCRPCPCPGN
PGSDHFNAHSCHADHTSNQIICNCREGYTGLRCDQCAPGYYGNPEQYGGQCLPCECNGNI
DTKDPGSCDPRTGQCLNCLYHTDGPSCGHCQHGYYGNALAHDCRLCTCVTAGTIHSACSD
GQCHCDRQTGACPCRQNVAGHNCDQCAPNHWNYGQDQGCEHCGCDPQHALGTHCNMFTGQ
CQCRPGFGGKQCTECEQFHWGDPRLQCQECNCHLLGSEMAQCDRSTGACECKEGAAGKHC
DECARGFTGDFPKCVQCHPCFHQWDDVVCQIKRDLEHIQYTAQKILESGVMPGVGDTRIK
ELERKLKGVQDLISMEDSNRIHQLIGQSIDDLRAEIALTDGRLMGVTRELNTTADEEEAL
RHILSVLEKELTHINATVAHKQRLLDNYLTSGFADQFEKVKKFYQESAKAEEKCNASVSG
PLSPVEQSKETRAVTEDLLDASKVKFLRALAAQNKSLSELQQKAHDLDKKVHHLSHKVCG
GHSNASVNGSCPDSQCGGAGCHDDQGNHVCGGHGCNGTVSTSVAALNHARNATDSLNAAK
EELQSVAKKLQDIASLTQDVKNQAMNTLKKAQKKKDHFENNNKKLKDFIKKIRDFLTEEG
ADPESIEKVAQQVLSITLPVNKTALDQMVMQIKDSLSNLTNVEGIVNQTSQHISIAKELL
DKAKDAKSRAEGVKDSANNTKQALDMSEKAIEKARAALKEANNNLNSTRNATVEVDERLT
QLEDKQMDVMMRLNNLSREVEALRNKTEQNRQMAKDAIAQANNATQVASSLEQSLNDTEN
RYQELQMKVDSLGGESGGLNSINQKAQDIKNEAEDLLSKATKGIDQLKKLEKKFKSNEQR
MQKQRMELDELKENATLVRDVIREQVQKYSNCV
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgggacctacctgcttctgttttcccgggacagtagtgtacgctggtgacacttggggc
tccacctcctcgcgccggtttgagctctccctactgtaccgctgcagaccagtgaccgag
cccatacagccggtgctggacggcgcgtgtaggggtgtgtgtgtctgtgtgtgtgagagg
ggaagagagggagagagaaagagagagggagaaggtttgtgtgtgacagagagaaagggg
gagtcgcagaaaactactgagcagccagagagacagcctgatgtccatgcgtccaggcat
catgatgtccatcatggctcagtatctgagcctcctcatgctggtgcttcatacaggagg
gagatgccccaggctctcagtgtgtttggacaggagctcccatcaagccctcatggttgc
acagatggcagctgctacccagcgacaggaaaccttctgattggacgggctgtcaatcta
tccgccacgtctacttgcggcctgaacgggccgcagccctactgcattgtcagccatctg
caggagtctgacaagtgctttgagtgtaactcccagcatcgctttgacccgtaccgccac
agaaacagccaccgcatcgaaaacgtgatctacctcatggacggcaacggagacaacaca
tggtggcaatctgtcaatggagaggagagtgtcagcatcagactgaacctggaggctgaa
ttccacttcacacatcttatcataaagtttaagactttccggcctgcagccatgttcatt
gagcgttcggctgattttggccgcacttggcgcccctaccgctacttcgcttcaaactgt
accaagaccttccctggcatccccgccaacggcctgcaccacatcaacgacatcatctgc
gaggagcgctactccgacatcgaaccctccactaatggagaggtcatttataaggttttg
gatcccgccattcatgtgaaagacccatacagcttggacattcaagaacttctgcgtatt
accaacctgcgtatcaactttactaagcttaacactctgggagacgacctgctggaccga
cgcttcgatgtcctgcagaaatattactacgccatctatgagctggtggtcagagggagc
tgcttctgttacggacatgcttcagagtgcgccccagtgccaggggtggacgcccgggag
aacggcatgatccacggtcgctgtgtatgcaaacataatacagagggcctgaactgcgag
cgctgccgacatttccacaatgacctgccctggagaccagcggaggcagagaacccacac
acctgcagagagtgcaactgtaatggccactcaagccattgtcactttgacatggcggtg
tatttggccacgggcaacatcagcggaggagtgtgtgacgactgtcagcacaacaccatg
ggacgcaactgtgagatgtgcaaacctttctactaccaagaccctaatagggatgtcagg
gacccacaagcctgtgttgcctgtgactgtgacccagtcggatcgatggagggaggagtg
tgtgacagtcacaccgacctggacgtgggcatgatctcaggacagtgtcgctgcaaagcc
aacgtcaaaggcactcgctgcgacgactgcaaggagagttattacggactcagccagaat
gacccgctgggttgtcagccttgcaactgtgaccctcgtggcatcatcatgatgggagct
ccttgtgaccagatcagtggggactgctcctgcaaaagatatgtcactggtcgctactgc
aaccagtgtctgcctgaatactgggggctcagcaacgacttggccggctgcagaccatgc
gactgtgactttggtggagcctacaacaacaggtgcatgatggagagcggccagtgtgac
tgcaggaggcatctgattggtcgacagtgttcagaggttcagcctgggtatttctgtgct
ccgctggactactacaaatacgaggccgaagacgccactggacactcccccagtgactct
ccactgccgggcaaagttcgacctcaggcagagaccgactgtgttcagcacctcagcaat
cagctgaggaggcaccggcgtcaccgtcgtatcaccaactcgcagcaacatcgggcagcg
ctgagacgtatccgccagcttcaacaaacaccagatgtgaggaccgttcatagagagcac
actcccagtcacatggtgacgtggacaggaccaggttttgcccgtgtgaaagatggtgcc
ggcctggtgtttacgattgacaacattccctacgccatggagtacgacatcatgatccgc
tacgaacctgagtcaacagaggactgggaggctatagttagtgtaacatctgtaatgctg
ccgtccagtctccggtgtggaaacctcctaccaactgaacaactctatacagtgactctg
ccgcatcgcaacagatacatccagatgcccaggccattctgtttcgagccaagtaatcgt
tatgtggtttcaatcaggttccaacgccacggggtcacacaccgacatctcactgctttc
attcttattgactcgctggtcctgatccccaaatatactgagcttcctggtttccaaggt
aatgagccagaagcagagcagcggcgggaggagatgattcgctacatgtgtctggattcc
tttatgatcacaccgatgcccgccctggctgagatgtgctccaaactcatctgtagtatt
tcatccatcattcacgatggtgctttgtcctgtcagtgtgaccctcagggctccctcagt
ggtgagtgtcacaaggtgggaggtgattgtcattgtaaacccaacgtgatgggtcgacgc
tgtgaccagtgtaccccgggaacctacggctatggagccaatggctgcactgtgtgtgac
tgccactcagagggttcattgagccaccaatgtgacccggttacaggccagtgccagtgc
aggcatggagccactgggcgtcagtgctcagactgccaaccaggccagtggggcttcccc
agctgcagcccctgtcagtgtaacagccacgcagacatctgtgacccccgcaacggggag
tgtagagactgcagggactacacaaccggacacctctgtgatagttgtgcggatgggttc
tttggaaacccggtgcttggttcaggggatcactgtcggccctgcccctgcccaggtaac
cctggctcagatcactttaatgcacactcctgtcatgctgaccacacctctaaccagatc
atctgtaactgcagggaaggctatactgggctccgctgtgaccagtgtgcccctggttac
tatggcaacccagagcaatacggtgggcagtgcctcccgtgcgagtgcaacggcaacatc
gacaccaaggaccctggctcatgtgaccccaggactggccaatgtctcaactgtctgtat
cacactgacggtccgtcctgtggccactgtcaacacggttactatggcaatgctctggcc
cacgactgcagactttgtacctgtgtgactgctggcaccatccactctgcttgcagcgat
ggacaatgtcactgtgaccggcagacgggagcctgcccttgcaggcagaacgtggccggc
cataactgtgaccagtgtgctcctaaccactggaactacggtcaggaccaaggctgtgag
cactgtggctgcgacccacaacacgcacttggaactcactgcaacatgttcacaggccag
tgccagtgtcgtccaggctttggaggtaaacagtgcactgagtgtgagcagttccactgg
ggagacccacggctgcaatgtcaagagtgtaactgccatttgctgggctcagagatggcc
cagtgcgaccgatcaacgggggcatgcgagtgcaaggagggagcagcggggaagcactgt
gacgaatgcgctcgcggcttcaccggtgactttcccaagtgtgtccagtgtcacccgtgc
ttccatcagtgggacgatgtggtgtgccagatcaaaagggacctggaacacatccagtac
accgcacagaagatcctggagagcggggtcatgccgggagttggggacacacgcatcaaa
gagctggagaggaagttgaaaggagtgcaggatctaatcagtatggaggacagcaacagg
atccaccagctgattggacagagcattgatgacctcagggctgagatcgccctgaccgac
ggacgtttgatgggtgtcacccgagagctaaatacaacagcagacgaagaagaggcactg
agacacatattgagtgtccttgagaaagagctgacccacatcaacgccactgtggctcac
aaacagcgcctgctagataactacctcacctccggatttgcagatcagtttgagaaagtg
aagaagttctatcaggaatctgcgaaggctgaggagaaatgcaacgcttcagtgtccggt
cctctcagtcctgtggaacagtccaaagaaacccgcgctgtcactgaagacttgctggac
gccagcaaagtcaagttcctccgtgctctggctgctcagaacaaatcactaagcgagctg
cagcagaaagcccacgacctggacaagaaagtccatcacctcagtcacaaggtatgtggg
ggtcatagcaatgccagtgtgaacggtagttgcccagacagccaatgcggcggtgctggt
tgccacgacgatcagggcaatcatgtatgtggaggacatggatgcaatgggacagtgagc
acgtctgtagcagcactgaatcatgcgaggaacgccactgacagtctgaacgctgccaaa
gaagagctgcagagtgtggcgaaaaagctccaggatatagcatctctgacacaggatgtg
aagaaccaggcaatgaacacgctgaagaaagcccagaagaagaaggaccactttgaaaac
aacaacaagaagctcaaagatttcattaagaagatcagagacttcctcactgaggaggga
gcagacccagagagcatagagaaggtggctcagcaggtgttgtcgatcaccctgccggtc
aacaagaccgccctcgaccaaatggtcatgcagataaaggacagcctttccaacctcacc
aacgtcgaggggattgtcaaccaaacctcgcagcacatcagcatagccaaggagctgctt
gacaaagctaaagatgccaagagccgagcagagggagtgaaggattcagccaataataca
aagcaggccttggatatgtctgagaaggccatagagaaagccagagcagctctgaaggaa
gccaacaacaacctgaacagcacaaggaatgctacggttgaggtggatgagaggctaacg
cagctggaggataagcagatggatgtcatgatgcgtttaaataacctttccagagaggtg
gaagctctgaggaacaagacggagcagaacagacaaatggcaaaggacgccatagcacag
gctaacaacgccacacaagtcgcatcctcacttgagcagagtctcaacgacacggagaat
cggtaccaggagctgcagatgaaggtggactctctcggcggggagtctggaggtctgaat
agcatcaaccagaaggctcaggacatcaagaatgaggcagaagacctcttaagcaaagcc
accaaggggatagaccaactcaagaaactggagaaaaagttcaagagcaacgagcagcga
atgcagaagcagcgcatggagctggacgagctgaaggaaaacgcaaccttggtgcgggac
gtcatccgggaacaagtgcagaagtacagcaactgtgtgtga
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integrated database retrieval system
