Etheostoma cragini (Arkansas darter): 117947147
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Entry
117947147 CDS
T07493
Symbol
cntn3a.2
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117947147 (cntn3a.2)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ecra00537
]
117947147 (cntn3a.2)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
Contactins
117947147 (cntn3a.2)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ecra00537
]
Others
117947147 (cntn3a.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_4
V-set_CD47
C2-set_3
Pur_ac_phosph_N
Interfer-bind
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
117947147
NCBI-ProteinID:
XP_034731651
LinkDB
All DBs
Position
7:complement(17544608..17577000)
Genome browser
AA seq
1025 aa
AA seq
DB search
MMLPWKHILLLSIINCLAECMDSGSYHGPKWRMEPGDLFIPIDSIDEEATLTCDAKGMPP
PQYRWSLNGSLINLSLDRRRRLSGGNLIISSLDRYQDVGMYQCMAFNTVGAILSRRASLQ
FAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSSGDLTYAWVFNEYPYFVQQDNRRFVSQQ
TGNLYIAKVEPSDVGNYTCVVMNSITKGKVQSSPTSLILRTDGVMGEYEPKIEVNFPDNV
PAAKGSTVTLECFALGNPVPEITWKRANGVPFPSKVKMKYSNAVLEIPSFQQDDTGGYEC
VAENKMGKNTATGRLAFYAKPQWMQAMKDMAQAIEERLYWECRANGKPKPSYTWLKNGQQ
LLSEDRIHVEDGVLSVSELTLSDAGMYQCVAENKHGAIYFAAELLVLASPPDFTGNVLRA
LLKAKAGTTVTLECKPQAYPIASILWKKGNLPIHTNDRITLSPDGTLRLANVSKSDAGSY
TCFARNRFGMSSTTGRLLVTDPTRITQGPVDMEIIVGESIVLPCQVASDPVLDLSFSWAF
NGQLIAKGDGHFELVGGRTAGDLMIRNIQLYHAGKYICVVDTDVESLSAVAVLIVKGPPS
PPDAVTVEEVTDSTAQLAWSPGRDNGSPITNYLIQNRTPFTVGWQRVNTVPEIIDGNTLT
ATVVDLNAWVEYEFRVLAKNSVGVGEPSPVSVKTRTEDAVPDAAPGDVGGGGGSRSELVI
TWEPVPEELQNGESFGYIIAFRAFGEVSWTHVATSVPGASRYVYRNDSIAPFSPFHVKVG
TYNSKGQGPFSPVITIYSAEIEPSGMPAGVWARSVSASEIEVNWQALSFTPERVLGYEVV
YWEDDTKPETMGKVRVPWNQTLVTMSGLAGNTQYFLTVSAFNTAGTGPFLPAINVTTKKP
PPAQPPLNVEWTLIGSQLSLYWEPVVAMESESEVTGYQLSYRRQRHKEVNTLTTTNSTAE
LTLLEEDDDYFIHIQTMSEGGLGPASDPIQIHQLSMSARGSRAWSSDISSLSLLLAIAIS
TFRFT
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgccatggaaacatattttactgttatcaatcatcaactgtctagcagagtgt
atggacagtgggtcataccatggtccaaaatggaggatggagccaggtgacttgttcatt
cctatcgactccatagacgaagaagctactctgacctgtgatgcaaagggaatgccacct
cctcagtacagatggtcattgaatgggagtctcataaatctgagcctggatcgccggcgg
cgtctgtctgggggcaacctcattataagcagtctggaccgctaccaggatgtagggatg
taccagtgcatggcgttcaacactgtaggagctatactcagcaggagagcaagtctgcag
tttgcctacctggatcatttcaaagtccacaccagaagcgcagtgtctgtccgtgagggg
caaggagtggtgttgctttgtggaacgcccacttcctcaggagatcttacatatgcatgg
gtcttcaatgagtacccgtactttgttcaacaagacaatcggcgatttgtctcccagcag
acaggaaacctttacattgccaaggtggagccctctgatgtgggtaactacacttgtgtc
gtgatgaacagcatcacaaagggcaaagttcagagctcacccacgtctctgatcctcagg
acagatggagtgatgggtgaatacgagccgaaaatagaagttaatttcccagacaatgta
cccgctgcaaaaggatcaacagttacgctggagtgtttcgcccttgggaaccctgtacct
gaaatcacctggaagagggctaacggcgttcccttccccagcaaagtcaaaatgaagtac
tcaaatgctgtgctggagatccccagctttcagcaggatgatacaggaggatacgagtgt
gtggcggagaacaagatgggcaagaacacagccactggtcgactcgccttttatgccaag
cctcagtggatgcaggccatgaaggacatggcccaggccatagaggagagactatactgg
gaatgcagagccaatggcaagcccaaaccctcctacacatggctgaagaacggccaacag
ctgctctcagaggacagaatccatgtggaggatggagtactgtcagtgtcggagctgaca
ctatctgacgccggcatgtaccagtgtgtggcagagaacaaacacggcgcaatatatttt
gctgctgaactactggttttagcctctcctccagacttcacagggaacgtcctcagagct
ttgctcaaagccaaggcaggaaccacagtgactttagagtgtaaaccccaggcctatccc
atcgccagcattttatggaagaaaggaaacctgcctatccacaccaatgacagaatcacg
ctttccccagacggaactttgaggcttgccaacgtgagcaagtctgatgcaggcagctat
acgtgctttgccaggaatagatttggcatgtcaagcacaactggacggctcctcgtgaca
gatccaaccagaatcacccaggggccagtggacatggagatcattgttggcgaaagcatc
gtgttaccctgtcaggtcgccagtgaccccgtcctagacctttctttctcctgggccttc
aatggacagctcatcgccaagggagacggtcactttgagctagtgggtgggagaacagca
ggagatctgatgatcaggaacattcagctttaccatgccggaaaatatatctgtgtggtg
gacacggatgtggagagcctgtcagccgtggctgtattgattgtcaaaggcccccccagt
cctccagacgctgtgacggtggaggaggtgacagacagtacagcccagctggcctggagt
cccggcagagacaacggcagccccatcaccaattaccttatccagaacaggactcctttc
actgtgggctggcagagggttaacacagtccctgagattatcgatggcaacacactgaca
gccactgtagtggatctcaatgcctgggtagagtatgagtttcgggttttagccaaaaac
agtgttggggttggagagcctagccctgtgtcagtcaagaccagaacggaggacgcagtt
cctgatgcagcgccaggtgacgtgggtggaggaggtggaagcagatcagaactggtcatc
acatgggagcctgtccctgaagaactacaaaatggtgagagctttggttacatcattgct
ttccgcgcatttggagaagttagctggactcacgtggccacctctgtccccggtgcatcg
cgctacgtgtaccgcaacgacagcatcgcgcccttttctccatttcatgtcaaggttggc
acttacaacagcaaaggacagggtcccttcagccccgtgatcaccatctactctgcagaa
atagaaccaagcgggatgccagcgggagtttgggccagaagtgtctcagcctctgagatt
gaggtgaattggcaggctctttccttcacccctgaaagggttctgggctatgaggtggta
tactgggaagatgacactaaaccagagaccatgggaaaggttagggtgccttggaaccaa
accttggtcacaatgagcggcttggcaggaaacacgcagtatttcttaacagtcagcgcg
ttcaacacagcgggtactggccccttccttcctgcaatcaatgttactacgaaaaagcca
ccaccagcccaaccaccactgaatgtcgaatggaccctaattggctctcagctgtctctt
tactgggaacctgtggtggcaatggaatcagagtcagaagttacaggctaccaactgtca
tacaggaggcagaggcacaaagaggttaacacactcacaacaaccaattctacagcagag
ctgaccctcctcgaggaggatgatgactacttcatccacattcagacgatgagtgaagga
gggctgggcccggcctcagatcccatacaaatccaccaactaagtatgagtgcccgcggc
tcgagagcctggagttcggacatctcctccctctccctgctgcttgccattgcaatatca
acattcaggtttacgtga
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