Etheostoma cragini (Arkansas darter): 117947239
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Entry
117947239 CDS
T07493
Symbol
krt18a.1
Name
(RefSeq) keratin, type I cytoskeletal 18 isoform X1
KO
K07604
type I keratin, acidic
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117947239 (krt18a.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117947239 (krt18a.1)
04147 Exosome [BR:
ecra04147
]
117947239 (krt18a.1)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
117947239 (krt18a.1)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117947239 (krt18a.1)
Exosomal proteins of other body fluids (saliva and urine)
117947239 (krt18a.1)
Exosomal proteins of colorectal cancer cells
117947239 (krt18a.1)
Exosomal proteins of melanoma cells
117947239 (krt18a.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
Mis12
CCDC39
DUF4407
Nucleoprot-TPR
Rod_CreS
Plectin_PPL
U3_assoc_6
GAS
Motif
Other DBs
NCBI-GeneID:
117947239
NCBI-ProteinID:
XP_034731830
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All DBs
Position
7:24312282..24318531
Genome browser
AA seq
431 aa
AA seq
DB search
MKTSRQSTYSVRSSTSSQAPVYRASTIHGGSGGNRISISSSVRSGLGAGMGAGMGIGSGM
GSGAGGFSSSVQVSGNNSDIMGNEKFAMQNLNDRLANYLETVRNLEQANHKLEIKIKEAL
EKSGPDFRDYSKYQVILDDLRKKVFDATTDNARLILNIDNARLAADDFRVKYESELAIRQ
SVEADIVGLRKLIDDTNMQRMNLESEIESLKEELIHLKKNHGNEVMELRNQISQSGVHVD
VDAPKGQDLAQLMAEIRAKYEKMALKNQEELKAWHESQITEVQTQVSQSTEALKGAQTEV
NDLRRQLQTLEIELESQRSLKASLEGTLRDTEMRYNMEIESLNTILLGLEAELTQLRNNI
QMQTQEYEALLNMKMKLEAEIATYRRLLDGEDFTLQDALEDQKTVKTKVMTVTQTLVDGK
VVSSSTETKNL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctccaggcaaagtacatactctgtgcgctcctccactagtagccaggctcct
gtctacagggcctccaccatccatggtgggtctggtgggaaccgcattagcatctcctcc
agcgtccgcagtgggttgggagccggtatgggagccgggatgggaattggatccggaatg
ggctctggagcagggggcttctccagcagcgtccaggtgagcgggaacaactccgacatc
atgggcaatgagaagtttgccatgcagaacctgaacgaccgcctggccaactacctggaa
acagtaaggaacctggagcaggccaaccacaagctggagattaagatcaaggaggccctg
gagaagagcggacctgacttcagagactacagcaagtaccaggtcatcctggacgacctg
agaaagaaggtatttgatgccaccactgacaatgcccgcctgattctcaacatcgacaac
gctcgcttggcggccgatgacttcagagtgaaatacgagtctgagctggccatccgccag
tctgtggaggccgacatcgtgggtctgaggaagctcatcgacgacaccaacatgcagcgc
atgaacctggaaagtgagattgaatccctgaaagaggaactcatccacctcaagaagaac
catggaaatgaagttatggagctccgtaaccagatttcccagtcaggagtccacgtggat
gtcgacgctcctaaaggacaagacctggctcagctcatggcagaaataagggctaagtac
gagaagatggcactaaagaaccaggaagaactcaaagcatggcacgaatctcagataaca
gaagtgcagacccaggtcagccagagcacagaagccctaaagggtgcccagacggaggtg
aatgacctgcgcagacagttgcaaaccctagagattgaactggagtcacagaggagcctg
aaagcgtctctggagggaacattgagggacacagaaatgcgttacaacatggagatcgag
tctctcaacaccatcctactgggcttggaggccgagctcacacagctgcgtaacaacatc
cagatgcagacgcaggagtacgaggccctgctcaacatgaagatgaagctggaggccgag
atcgccacatacagacgcctgctggatggagaagacttcacgctccaggacgctctggaa
gaccagaaaacagtgaagaccaaagtgatgactgtcactcagaccctggtggatggcaag
gtggtttcctccagcacagaaaccaagaacctttga
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