Etheostoma cragini (Arkansas darter): 117947313
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Entry
117947313 CDS
T07493
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00310
Lysine degradation
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117947313 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117947313 (prdm2a)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117947313 (prdm2a)
Enzymes [BR:
ecra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
117947313 (prdm2a)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117947313 (prdm2a)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117947313 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_11
zf-C2HE
zf-C2H2_6
Upf2
zf-C2H2_8
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
117947313
NCBI-ProteinID:
XP_034731997
LinkDB
All DBs
Position
7:18237920..18248042
Genome browser
AA seq
1392 aa
AA seq
DB search
MEDSPHLYISEFGDIENIEEEKEEDYIYQEETNMESDMFKSLYPDLHKHPNQDTERDWNC
FPCQHCERHFTSQQGLERHMHIHALANNETHAYKTNKSNTSFGSNLGQLQHENMMPLDSV
GSVRQLHTSSPTSSNTCILSAGDHTAQPDELGVLEGHHAASCCEKIFTTHTNKQRHEHRN
HEQHPQVTDLEKPQLPQEENLKGMLVEKSPQETELGDNKTPPAVVENIVKHAEQYMLDVS
SNISENLSFYIDGKIVSTSTVSSCEAAEINSGSGSVGLDALILDPTQISQVLNTDSVTGK
EILGQTLAKRRTATPPLLPQIKTELESEVVVSSSSSSLVSSLIENLHPQNTECTVVQKER
TVFLSPKLKQLLEKQDGLKPTLALIADGQKPCSPVSLTPLPAGSGRFKRRTGSPPSSPQQ
NPTSKEETPDTGCCDAASTGQMDTQRSSPLHQIANVKDDTTPPGEPAPTPILTESWPPAT
GGNSCNQQPLDLSNTVNSSVDVAVADAVLDLSLQKKTLGDSEPTLHLVSQAILKEGKSCM
AETALMNIEEQNVSLRNIETPLVTDFTIFTGSDMMTQLEPMAEGLVYGLALPSDPLTQSP
ASQAPVALQPATPCTIAFASPVSSTTLPTAPSLITVLAPPHISNPSSQPIQVLAPNISSE
PLVICTENALHFSECDLTSAFATTSSANPVTFSQSFDPNLNLPSHVFLSDPLALHPPIVE
STAMSEVPFTPTVTLTDSLINSYNIASNTVLIECTIALEAPGSLVPAAVTLQENTAEPPA
PTQMVVNHIEQQQIVSVPNPQTVDPTILMSSISESVTLSTTASVISDCPTVAESSPDPET
AVNTDSPTIKEEDPADSSVSIPEISSKTSPSSEKAVEDESFNNLPSDAQQQTFTKNFICN
VCDNLFHSMKELGYHVGDHADEWPYKCEFCVLLFNKPSALLDHRLNLHGVGKTYVCSACT
KEFVYLCNLKQHQEELHPGQQCTYTEDEKGKLRPQNYNNSPKVNTQPSVPDAAEEPKIVG
GEVDVAADELFTTIKMMTSDGAKVKGPDVRLGINQHYPSFKPPPFPYHNRSPAGSVASAT
NFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKRNPIPLRHFAK
IQNGVLSTTNSTHGLNASNRPSQSNRSKPNQESQVNVKFKVLSKKKKKLVQRVMPQRNKP
VPSSNKMSHAQVAVQQEIFVCPHCNREFTMRRSRTKHMAVCPKKPKEVKKRKEGGISVTK
ENNRHLHRGVEEKQQASPKHKTRLQTSGPGKRSAILPVQTVFSNKRSKIIIKESTQPKQE
TPTLNELPIVRTFNPSMRQYSRVQHNVKGIPIKITIVKPQQAAPQKDELPPTQSREEATG
AVTNSNEQSPTA
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcgcctcacttgtacatctctgaatttggagacattgagaacattgaggag
gagaaggaggaggactacatttatcaagaggaaactaacatggaatcagacatgtttaag
tcactgtatccagatctccataaacatccaaaccaggatactgagagagactggaactgt
tttccctgccagcactgtgagagacattttaccagccaacaaggcttagaacgacacatg
cacatccacgctttggcgaacaatgaaacacacgcatacaaaaccaataagagcaacaca
tcttttggttcaaatctgggtcagctgcagcatgagaatatgatgcctctggattcagtg
ggatcagtcaggcagcttcatacttcatcccccactagctctaatacttgcattttgtcg
gctggtgaccacactgctcagccagacgaactgggagtattagagggacatcatgctgca
tcatgctgtgaaaaaatattcactacacataccaacaagcaacgacatgagcacaggaac
cacgagcagcacccgcaagtcactgatttggaaaaaccccagcttccccaagaggaaaat
ctcaaggggatgctcgttgaaaaatctccacaagaaacagagcttggtgacaataaaaca
cctccagctgttgtggagaatatagtgaaacatgcagagcaatacatgctagatgtctcc
agcaatatttcagagaatctgagtttttatattgatggaaagatagtgtcaacaagtaca
gtcagtagctgtgaagcagctgagattaattctgggtctggatctgttggactggatgcc
ctgattttagaccccactcaaatcagccaggttttaaatactgattcagtaaccggcaaa
gagatacttggtcaaacactggccaagagaagaactgcaacaccacctcttttaccacaa
attaaaactgaactggagtctgaggtggttgtgtcatcttcctcttcttcactcgtatct
tctttgatagagaatctacatcctcagaatacagagtgtacagttgtgcagaaggagaga
actgtgtttctgtctccaaagctgaagcagctcctggaaaagcaggatggtcttaaacct
acacttgccctcattgcagatggccagaagccttgttcacctgtctctctcactcccctg
cctgctggatcaggaaggtttaaaagaaggaccggatctccaccaagctctccccagcaa
aacccaacatctaaagaagaaacaccagacactggatgttgtgatgctgcaagtacaggg
cagatggacacccaacgtagttcacctttgcaccaaatagccaatgtgaaagatgataca
actccacctggggagccagcaccgacacctatcttgacagagagctggcctcctgcgacc
ggcggtaactcctgtaaccagcagccactggatctctctaatacagtcaacagcagtgtg
gatgtagctgtagctgatgctgtgctagatttgagcttgcaaaaaaagacccttggtgat
tctgaaccaacattacatttagtttcacaggcaattttgaaagaaggaaaatcatgcatg
gcggagacagccttgatgaatattgaagagcaaaatgtaagcctaaggaatattgagacc
cctttagtcacagacttcaccatatttacaggttcagatatgatgacccaattggagccg
atggcagaaggacttgtttatggacttgcacttccctctgatcctctgactcaatcacct
gcctcccaagcccctgttgctttgcagccagctacaccttgcactatagcatttgcttcc
ccagtgtcaagcacaacactcccaactgctccttcattaatcacagttttggcaccacca
catatttctaatccttcaagccaaccaatccaggtattggccccaaatatatcttcggag
cccctggtaatttgcaccgaaaatgctttacatttttcagagtgtgatttaacttctgca
tttgccaccacgagttctgccaaccctgttactttctcccagtcctttgatccaaatcta
aatctacctagccatgtgtttctctcggatccactagcgcttcatccgcctatagttgag
tccactgctatgtcagaagtgccattcacacccactgtaactttaactgattcactcatc
aactcttacaacattgccagcaacacagtgttgatagagtgcacaatagctcttgaagcc
ccagggagtttagtccctgctgcagttaccttacaagaaaacactgctgagcctccagca
cctacacagatggttgttaatcacatagaacagcaacagattgtatcagtgcccaatcct
caaactgtggaccccactattcttatgtcctccatctcagagtcagtaactctatccacc
accgcctcagtaatatctgattgtcctactgtggctgaatcaagtcctgacccagagact
gctgttaatacagattcaccaaccataaaagaggaggaccctgctgatagtagtgtttcc
atacccgaaatttcatctaagacctcaccttcttctgagaaagctgtagaggatgaatca
ttcaacaacttaccaagtgatgcacaacagcagactttcaccaagaattttatctgcaat
gtgtgtgataatcttttccattcaatgaaagaactgggctatcatgtaggtgaccatgct
gatgaatggccctacaaatgtgagttctgcgtgctgctcttcaacaaaccctctgctttg
cttgatcatcgattaaacctccacggcgtcggcaagacttacgtttgcagcgcatgtaca
aaagaatttgtctacctttgtaatctgaaacagcatcaagaagaattgcatcctggccag
cagtgtacgtacacagaagatgaaaagggaaaactaagacctcagaactacaataactca
ccgaaagtcaacacgcagccctcggtgcccgatgccgcagaggaacccaagatagtggga
ggtgaagtagatgtggcagctgacgaactgtttacaacaataaaaatgatgacctcagac
ggagccaaagtcaaagggcctgatgttcgtcttggcattaaccaacattatcccagcttt
aagccccctccatttccttaccataacagatcaccagctggctcagtggcttcagccaca
aacttcaccacccacaacatcccacaaacctttagtacggctattcggtgtaccaagtgt
ggaaagagctttgataacatgccagagttacacaagcatatcctagcttgtgcaaatgcc
agtgataaaaggcgatacacgcccaaaaggaatcctatcccactacggcactttgcaaaa
attcaaaatggagttctgtctaccaccaattctactcacggactaaatgcttcgaatagg
cccagccagtcaaacaggtccaaacctaaccaagaatcgcaggttaatgtgaagttcaag
gtgttgagcaaaaaaaagaaaaagttggtccaaagagtcatgccacagaggaacaagcca
gtcccttcatcaaataaaatgtcacatgcacaggtggctgtgcagcaggagatctttgtc
tgcccacactgtaacagggagttcacaatgcgccgcagcagaaccaaacacatggcggtc
tgccccaagaaaccgaaagaggtgaagaaaaggaaagaaggaggaatctctgttacaaag
gaaaataacagacacctccatagaggggttgaagagaaacaacaagcctcgcctaagcat
aaaacaagactccagacttctggccctggtaaaaggtccgccatcctaccggtgcaaacg
gtcttttcaaacaaaagaagtaaaataattataaaagaaagcacgcagccaaaacaagag
acacccactctgaatgaacttcccattgttcgcactttcaacccctctatgcgccagtac
agcagagtgcagcataacgtcaaaggaatccccattaaaatcaccatagtgaaaccacaa
caggctgcaccacagaaggatgagctacctcctacccagagccgagaggaggcaaccgga
gccgtcaccaacagcaatgagcagagtcctacagcctga
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integrated database retrieval system
