Etheostoma cragini (Arkansas darter): 117947335
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Entry
117947335 CDS
T07493
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117947335 (ybx1)
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117947335 (ybx1)
03041 Spliceosome [BR:
ecra03041
]
117947335 (ybx1)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
117947335 (ybx1)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117947335 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
117947335 (ybx1)
Spliceosome [BR:
ecra03041
]
Common components
Common spliceosomal components
General mRNP proteins
117947335 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
117947335
NCBI-ProteinID:
XP_034732053
LinkDB
All DBs
Position
7:complement(18988640..18993648)
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AA seq
328 aa
AA seq
DB search
MSSEAETQQPPQPADDVESPSSPAAASSAGDKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGIAVQGSKYAA
DRNRYRRYPRRRGPPRGGEYPENYQSDGEGEPSSGGSGGRDKSSRDGGESAPEGDAPQQQ
RRPTYPGRRRYPPYFVRRRYGRRPPYTNAPRGEMTEGGEGDESQGGPEQGNKPARQSYYR
GFRPRFNPRGPPRPRPVRDGEEDKENQGGEGGQNQQPRQRRYRRNFNYRRRRPQTGGKPG
QETKEAKTGGDPSAEKTSAPEAQQGGAE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaacaaccgccgcagcctgctgacgatgtggagagccca
tccagcccggcagccgcatcttccgcgggggataagaaggtcatcgcaacaaaagtcttg
ggtactgtcaaatggttcaacgtcaggaatggatatggttttatcaataggaatgatacg
aaagaggacgtttttgtacaccagacagccatcaaaaagaacaacccgaggaaatacctt
cgcagtgttggagatggagaaactgtggagtttgatgtagttgagggagagaagggagca
gaggcggcaaatgtcactggccctggaggcattgcagtccaaggaagtaagtatgcagct
gacaggaaccgctacaggcgctatcccagaagaaggggccctccccgtggtggagaatat
ccagagaactaccagagcgatggagagggcgagccaagcagtggaggcagcggaggtcgt
gacaaaagcagccgagatgggggagaaagtgcccctgaaggagatgcgccacaacagcag
cgaagacccacttaccctggaagacgacgctacccaccatactttgtacgtagacgctac
ggccgccggcccccgtataccaacgcaccacgtggagagatgactgagggaggcgagggt
gacgagagccaaggaggtcctgaacagggcaacaaaccagcgagacagagctactacaga
ggcttccgaccaaggttcaatccaaggggtccaccccgtcccagaccggtgcgggacggc
gaggaggacaaggagaatcagggtggcgaaggtggtcagaaccaacagccccgtcagcgg
cgttaccgccgtaacttcaactaccgtcgcagacgcccacagactggaggcaaacctggc
caggaaaccaaggaggccaagacaggaggtgacccatctgcagagaaaacgtccgctccc
gaggctcagcaaggtggggctgagtag
DBGET
integrated database retrieval system
