Etheostoma cragini (Arkansas darter): 117947369
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Entry
117947369 CDS
T07493
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04137
Mitophagy - animal
ecra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117947369 (usp8)
04137 Mitophagy - animal
117947369 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117947369 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117947369 (usp8)
04121 Ubiquitin system [BR:
ecra04121
]
117947369 (usp8)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117947369 (usp8)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117947369 (usp8)
Membrane trafficking [BR:
ecra04131
]
Endosome - Lysosome transport
Others
Others
117947369 (usp8)
Ubiquitin system [BR:
ecra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117947369 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
LpxI_N
Motif
Other DBs
NCBI-GeneID:
117947369
NCBI-ProteinID:
XP_034732113
LinkDB
All DBs
Position
1:complement(12579247..12606178)
Genome browser
AA seq
1087 aa
AA seq
DB search
MPAVSTGAKELYLSTSLGELNKKAEIKPDKTSTRSYVQSAGKIFKAAEECRLERDEEKAY
VLYMKYLTVYDIIKKRPDFKQQPEYHMTMLGQNSFKKAIEEAEKLSESLKLRYEEVEVRK
KLEEMERQEEKKRREEITEKDGHPKVSAANKKDSKKVKGEQNELKNELKKATSKAAVLAG
GISAEKLYHMMKDQTITMIVMDARSIRDFEESRIKVQGQTCVSVPEEAISPGITVNQIEA
KLPEESKEQWRRRGFVDYLVLLDWFSSVTDLKLGTTLQSLKDALYKWDSITILRSEPLVL
EGGYENWLLFYPMYTTNAKVRPPRQNIISSLPQLNFSYPSLEEPKPPTPPLPEPEVTPEP
HEPSAPVLVNGVAPAEPPTSKTSMVIDRLPDAVNSTVTGSTNSEQDLSKKGPVAGISSHA
PPTAKAFPQFDRTKKPSIHVSDEPKSSHNGSAKDSPQNGPCVPDRSVKPPLIPSTSLSKE
EQSQIHSDVVAGMEKARQEQEKRIQERRVDEERREKEQKERLEREQSEKKKEEQENGLQE
KKKLERQKAEEEGDKKNKLWNEKERRGKEQSSDTPSKSMSLDSPAPNHLVSEIKREPLTR
ARSEEMGRSVPGLPDGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTVKQ
KTPRPAEPDTNCEEEREQSKLKRSYSSPDISQDLREEAQKKASAPATAAAIPTFNRENKP
SSTKVYSKVEIVRPSAAKIRNLNPTFGGNGPSLTGLRNMGNTCYMNSILQCLCNTPAMAE
YFNNNFYLEDINRQNILGHKGEVAEEFGVIMKALWAGLYKCISPRDFKITIGKINDQFAG
SDQQDSQELLLFLMDGLHEDLNKRADNRKRYKEEENDHLDDQTAADLAWSKHKLLNESII
VALFQGQFKSTVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNK
VFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTSVDFSLDALDLAQYVI
GPKQSLKRYSLFGVSNHYGGLDGGHYTAYCKNAPKQRWYKFDDHEVTEISTSSVKSSAAY
ILFYSNL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtttccaccggggccaaagagctatatctgtccacatctctgggtgaactc
aataaaaaggctgaaattaagccggacaagacaagtaccagaagctatgttcagagtgcc
ggcaaaatattcaaggcagcagaggagtgtcgtctggaaagagatgaggagaaagcttat
gtgctgtacatgaagtatttaacagtatatgacatcatcaagaaaagaccagacttcaaa
cagcaaccggagtatcacatgaccatgcttgggcaaaacagctttaagaaagccattgaa
gaagccgagaagctctctgaaagccttaaactcaggtatgaggaggttgaggttcgaaaa
aaacttgaggagatggagagacaagaggagaagaaaaggagggaggaaataacagaaaaa
gatggtcatcctaaagtgtcagctgcaaacaagaaggacagcaaaaaggtaaaaggagaa
cagaatgaactgaagaatgaattgaagaaagcaacctcaaaagctgcggtgttagctggt
gggatctcagctgagaagctttaccacatgatgaaggaccagacgattacaatgatagtc
atggatgcccgcagcatcagggacttcgaggagtctcgcattaaggtccaaggccagacc
tgcgtcagcgtgcctgaagaggccattagcccgggaatcactgtgaatcagattgaggcg
aagctgccagaggagtcgaaagagcagtggaggcggcgggggtttgtggattatttagtc
ctgctggactggttcagttctgtcactgaccttaaactgggcaccaccttgcagagcctc
aaagatgccctctataagtgggacagcatcaccatcctgcgtagtgagcccctggtgctg
gagggaggctacgagaactggctgttgttttaccccatgtacacaaccaacgctaaagtc
cgcccccccaggcagaatatcatcagctccctccctcagctgaattttagctacccatcc
ctggaggagccaaagcctccgaccccacctctaccagagccagaggttacacctgaaccc
catgaaccctccgctcctgtgctggtgaatggggttgcaccagcggaaccccccacatct
aaaacttccatggtgattgataggctgccagatgctgtcaattccactgtcacaggctct
acaaattctgagcaagaccttagtaagaagggtcctgtggcaggcatatccagccacgca
cctccaacagccaaagccttcccacagtttgaccgtaccaagaaaccctctatccatgtg
tcagacgagcccaagtccagccacaacgggtcagcgaaggactcgccgcagaacggccca
tgtgtccctgaccgctcagtcaaaccgccgctcatccccagcacttctctgtctaaagaa
gaacaaagccagatacactcagacgtggtggcagggatggaaaaggcgaggcaagagcag
gaaaaacgcatccaggagcgtcgtgtagatgaggagagacgggagaaggaacagaaggaa
aggctagaaagggaacaaagtgagaagaagaaggaagagcaggagaatggacttcaggag
aaaaagaaactggaaagacagaaggcagaagaagagggagataaaaagaacaagttgtgg
aacgagaaagagaggaggggaaaggagcagagctctgacactccttcaaagagtatgtct
ctggactcgcctgctcccaaccatctggttagtgaaattaagagggagcccctgaccaga
gcaaggagtgaggagatgggtaggagtgtgcctggccttccagacggttggatgaagttc
cttgacacagtgacggggacctaccggtactaccattccccaaccaatcgtgtccaccta
taccctcctgaggtcactgttccccagactccaccctccacgccaccaacagttaaacag
aaaaccccacgaccagctgagccagacaccaactgtgaagaagagcgggaacagtctaaa
ttgaaacgctcctactcctcccctgatatcagccaggacctgagggaggaggcccagaag
aaggccagcgctccggccactgcagctgctatacccaccttcaacagagagaacaaacct
tccagtactaaagtctattccaaagtcgagattgtgcggccgtcagctgccaaaattcgc
aacctgaatcctacatttggaggtaatgggccatccctgactggccttcgtaacatgggc
aacacatgctacatgaactccatcttacagtgtctgtgtaacactcctgccatggctgag
tacttcaacaataatttctacctggaggacatcaacagacaaaacatccttggtcataaa
ggggaggtggcggaagagtttggtgtgatcatgaaggccctgtgggctggactgtacaag
tgcatcagcccacgggacttcaagatcaccataggcaagatcaatgaccagtttgctggc
tctgaccagcaagactcccaggagctgctgctgttcctcatggatgggctccacgaggac
ctcaacaagagagcggacaacaggaagcggtacaaggaggaggaaaacgaccatctggat
gatcagacggcagccgacttggcttggagcaaacacaagctgctgaacgagtccatcatc
gtagcactgtttcagggccagttcaagtccacggtgcagtgtctgacctgccatcgcaag
tcacggacatttgagaccttcatgtacttgtcgctgcccctggcctccaccagcaagtgc
tccctgcaggattgtctgaggctgttctccaaggaagagaagctgacggacaacaacaag
gtgttctgcagacactgcaaagcccacagagattccaccaagaaactggagatctggaag
gtcccccccattctcctggtgcacttaaaacgattctcctatgagggtagatggaagcag
aagttgcagacgtctgtagacttttctctagacgctctggacctagcccagtatgtcatt
ggacccaaacagagcctgaagagatacagcctgtttggagtttctaaccactacgggggt
ttagatggcggccattacacagcctactgtaagaacgcccccaaacagcgctggtacaag
tttgatgaccacgaggtgaccgagatctccacctcctccgtcaagtcctcggcagcctac
atcctgttttactccaacctgtga
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