Etheostoma cragini (Arkansas darter): 117947372
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Entry
117947372 CDS
T07493
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117947372 (apex2)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117947372 (apex2)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117947372 (apex2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Amastin
Motif
Other DBs
NCBI-GeneID:
117947372
NCBI-ProteinID:
XP_034732133
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Position
7:complement(7265586..7270335)
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AA seq
578 aa
AA seq
DB search
MKIVTWNINGIRTFRGGIKTALDSLDADIICVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTNHEGAVGCYGDHTEFCSKDLQLLDNEGRAV
ITQHRIMCQDKERTVTVVNVYCPRADPEKPERKQFKLQFYKLLQSRAEAILKEGSRVIVL
GDVNTSHREIDCCDPSDVDDFDENPGRKWLNGFLQSGIREAKEINEQEPGEESEVTSADP
CDSGKFVDTFRYFHPTRTSAFTCWSTLTGARQTNYGTRIDYIFADCQLAKEQFVAADIRP
EVEGSDHCPVWGQLRCSLVSSSKPPLLCTCYLPEFAGKQQKLSRFLVKVDQKSIQPEQRD
ALPGSQEEEERRENLNPSTDGIVFGKKRLLTSDCVVPKGKKTKTVKASSKPQGSLLSFFK
PKLTNVVPSPEISVRQCEKTLSVDKVTSSQSSQKAPTTIEIRSSVPVDTEPGSGSQQQCN
STMEDSDKPRKTTQLTPQPSVGCSGAKKGASLVFWKSVLHGPPPPPLCKVHGEPCVLRTV
KKEGPNMGKQFFVCARPQGLASNPEARCNFFAWVEKGK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgttacttggaacataaatggtataaggactttcagaggcggcattaaaacg
gctcttgattcactggacgcagacattatctgtgttcaagagactaaagtgacaagagac
ttgcttgatgaaagaacagccattgttgatggctacaactcctatttcagcttcagtcga
ggacgcagcggctattcaggggttgccacttactgtaaagacagtgcgactccatttgct
gctgaggagggtctcacgggtctgctgaccaaccatgaaggggctgttgggtgctatggt
gaccacactgagttctgtagcaaggacctgcagctattggacaacgaaggacgagctgtt
attacccagcacagaatcatgtgtcaggacaaagagcgaactgttactgtagtcaatgta
tactgtccacgggctgaccctgaaaagccagagcgaaagcagttcaaactacagttttac
aagttgcttcagagtcgggctgaagctatactgaaagaagggagccgtgtgattgtttta
ggagatgtaaatacatctcaccgggaaatagactgctgtgaccccagtgatgttgatgat
tttgatgaaaaccccggtaggaaatggctgaatggctttttgcaaagtggcatacgagag
gcaaaggaaattaatgagcaggaacctggtgaagaatctgaggtaacctcagcagatccc
tgcgacagtggaaaatttgtggataccttccgctatttccacccaactcgcaccagcgcc
ttcacatgctggtccactctcactggagcgcggcagaccaactatggcacacgcattgac
tatatatttgctgattgccagctagccaaggagcagtttgtggcagcagacatcaggcca
gaggtggaggggtcggaccactgccctgtgtggggccaactgagatgctctctcgtctcc
agctccaagcctcccctcctctgtacgtgctacctgccagagttcgctggcaagcagcag
aaactctcccgcttccttgttaaggtggaccaaaaatcaattcagcctgagcagagggat
gcattaccgggatctcaagaagaggaggaaaggagggagaatttaaacccttccacagat
gggatcgtctttggtaaaaaacggttattaacatcagactgtgttgtcccaaaggggaaa
aagactaagacagtcaaggcctcttcaaagccacagggcagcctcctttcctttttcaaa
cccaaacttacaaatgttgttccctctcctgaaatctctgtcaggcagtgtgaaaaaacc
ctcagcgtggataaagttacctcatcacagagctctcaaaaagcgcccacaactattgag
atcaggagcagcgtacctgtagatactgaacctggctctggttcacaacagcagtgcaac
agcacaatggaggacagtgacaagccgaggaagacaacacaattaaccccacagccctct
gtgggatgctcaggtgccaagaaaggggcatcgttagtgttttggaagtcagtgcttcat
ggacctcccccaccccccctttgtaaggtccatggggaaccatgtgtgcttcgtactgta
aaaaaggagggtccaaacatgggcaaacagttctttgtgtgtgcccgtcctcagggactt
gcttccaaccccgaagctcggtgtaatttctttgcatgggtcgaaaaggggaagtga
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