Etheostoma cragini (Arkansas darter): 117947429
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Entry
117947429 CDS
T07493
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ecra01001
]
117947429
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117947429
Enzymes [BR:
ecra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117947429
Protein kinases [BR:
ecra01001
]
Serine/threonine kinases: Other
Other
117947429
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117947429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
LisH
WD40
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
117947429
NCBI-ProteinID:
XP_034732228
LinkDB
All DBs
Position
7:11233068..11248974
Genome browser
AA seq
1555 aa
AA seq
DB search
MASASASVDSKAELTTLLEQWEREQQGSTQELVNIITKISELVEKETEEYHKADPDPFDD
RHPGRADPECVLGHLLKILFKNDDFMNTLVNSYVMTSREFPLNAAACRLLQNIMPGLETA
VVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLHRL
RELQDKDAENKREIKRPSPRKTLSEPLLPLDEETFDGGFEEKPFTPGRNGAEREGTGPGE
GVEIPFSTLEPENELSFRLNSPHKASSRANSAVKTMMKPMSAPGSLTDQGMSDCSSYLKR
KAERESGRTPKQKINFSLPDPDRNFSELSNSSWSEMSPWVIGNNYHLYPLTPEIEQRLIL
QYLTPLGEYQELLAVFMQMGARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAEF
VAHGGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVGYTLWLLEC
SHASGCCHATMFFSISFSFRAVLELFDRQDGLRRLVNLISTLEILNPEDQGALLSDDEIF
SSRQTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKAVSYSREQVVEM
MEFLIEYGPLRLYWEPAEFFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDILSILT
VVPKTQLLLSEAVAVLDEGGSTVSTVGISIVLAVAEGEVFVNDAEIQKSALQVVINCVCA
PDKRMSSIGKFIAGTPRRRLPQQTKASESVLAKMWNVVQSNNGIKVLLSLLTVKMPITDA
DQIRALACKALVGLSRSSSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFCKFAAE
LIERISGKPLMIGTDVSLAWLQRASVVAQSRISFPEKELLLLIRNHLVAKGLHDTAITLT
KEADLPMTCLSLSTHSTSAFPPVAPPPPASPVVTLPRTPRLANGVGSRLGNHPSHSSTPG
SSNLQTRPSTAQPTVSSTAFPSTSVPICSNGSPLIGRIIFSRERLAACATVSCKKPRVLR
QKSDHGAFSQSPAMKKQFDRHLPSPPALDSIITEYLREQHARCKNPVATCPPFSLFTPHQ
CPEPKQRRQAPINFTSRHTRRVIYPKYGGVDGGCFDRHLIFSRFRPISVFREADEDESGF
MCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLLTSASW
SYPLSALWGMKSVFIMKHSFLGDHYVEFSKLSQDRVIGTKEHIARIYDIQTGQVTLTLNN
PDLANNYKRNCATFNPTDDLVLNDGVLWDVRTAQAIHKFDKFNMNISGVFHPNGLEVIVN
TEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADDEDDMMEMQMKSPFGSSFRT
FNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRLAEEEE
EDEDDQQDDDQEEDDDDDEDSDDDVDTDPLIAEPENENGGEDEDDEEEDDGNDEFSPSDE
EVARILEEDVDVGDDDDEDDNDEDDSDNDDVNLDGDNDSSDNSDLEDDIILSLNE
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcatctgccagtgtggactcaaaggcagagctgactactctactggaacag
tgggagagggagcaacaaggcagcacacaggagctagttaacatcatcaccaaaatttcc
gagcttgttgagaaagagacagaggagtaccacaaagcggacccagacccttttgatgac
cgacaccctgggagagctgatccagaatgtgtgttagggcacctgctcaagatcctgttc
aagaatgatgactttatgaacaccctggtgaatagctatgtgatgaccagcagagaattt
cccctcaatgcagcagcttgtcgcctgcttcagaacatcatgcctggattggagacagct
gttgtctttcaggaaaaggagggcatagtcgaaaggctgtttaagtgggctcaggaggcc
gagcagcccctcagaatatatgccacaggcttgttggccggcgctatggagaaccaggac
attgcggccaactacagggaggagaactctgttttggtgcccttgatgctgcatcggttg
cgtgagcttcaggataaggatgctgagaataaaagggaaatcaaacggcccagccccagg
aagactttgagtgagcctttgctacctttagatgaggagacttttgacggaggctttgaa
gagaagccctttacaccagggagaaacggagctgaaagggaggggacagggccaggggag
ggtgttgaaattcccttctcaaccctcgagcctgaaaacgagctttcgttccgtctcaac
tccccccataaggccagcagccgtgccaactcggctgttaaaaccatgatgaagcccatg
tctgccccaggttcactgacagaccaaggcatgtctgattgcagcagttacctaaaaagg
aaggcagagagggagagcggcaggaccccaaaacaaaagataaatttctctttgccagac
ccagacaggaactttagtgagctttccaacagcagctggtctgagatgagcccctgggtg
attggcaacaactatcatctgtaccctttgaccccagaaatcgaacaaaggctcatcctg
cagtatctcacacctctgggagagtatcaggagctgctggcggtgttcatgcagatggga
gctcgtgagctgcttatgcattacatggatctaaagcagaccaatgacgtgcagctcacc
tttgaagctctcaagtacctggcttctctgctgctgcacaagaagtttgctgcagagttt
gtggctcatggaggagttcagaaattactggaaatccccaggccatctatggctgccact
ggagtttctctgtgcctctactaccttgcctataaccaggacgccatggaaagggtgtgc
atgttgccccactccatcctgtcagatgtggttggttacacactgtggctgctggaatgc
tcacatgcatccggctgctgccacgccaccatgttcttctccatctccttctccttccgc
gccgtcctggagctcttcgacaggcaggacgggctccgacgcctcgtcaatctgattagc
acactggagatcctgaaccctgaggaccagggagcactgctgagtgatgatgagattttt
tccagcaggcagacggccaagcacacctgcatggccctgcgccggtactttgaggcccac
ctggcgatcaaggtagagcaggtgaagcaatccctgcagcgcacagaggggggtgccccc
attcactcccagccatactataaggcagtcagctatagccgtgagcaggtggtggaaatg
atggagtttctgatagaatatggtccactcagactatactgggaaccagcagagttcttt
cacaagttgtcatgtgttcagctcctcctgcagctcatttcaattgcctgtgactggagg
acctactatggcaggagcgatacagtgcgttatgctctcgacatcctgagcatcctcaca
gtagtcccaaagacccagctgctgttgtctgaggctgttgctgtgcttgatgagggaggt
tccactgtttcgactgttggaattagcatagtcctggcagtggcagaaggagaggtcttt
gtaaatgatgccgagattcagaagtcagctctccaggttgtcatcaactgcgtctgtgct
ccagacaaacgcatgtccagcattggcaagttcattgcaggcaccccccgtcgccggctg
cctcagcagaccaaagccagcgagagtgtgctcgctaagatgtggaatgtggtgcagtcc
aacaatggcatcaaggtgctgttgtccctgctgacagtaaagatgcccattacagatgca
gatcagatccgagctctggcctgtaaggctctggtgggtctgtctcgctccagctctgtc
agacagattatcagcaagctgcctttgttcagcagcggacacatccagcagctcatgaag
gagcctgtgctccaggacaagcgcagcgaacatgtcaagttctgtaagtttgcagctgag
ctgatagaaaggatatctgggaaacccttgatgatcggtacggacgtgtctctggcgtgg
ctacaaagggccagtgtggtagctcagtccaggatctcctttcctgagaaagagctactg
ttgctaatcaggaaccaccttgtggccaaaggccttcatgacactgccatcacactcacc
aaggaggcagatctcccaatgacatgtctgtctctttctacacattcaacttctgctttc
cctcctgttgctccacccccacctgcctcccctgttgttactctaccccgcaccccacgg
ctggccaacggtgttgggtcaagactcggaaatcatccctctcattcatccaccccagga
tctagcaatttacaaacacgtccctctacagcacaacccactgtgtcttctactgctttc
ccgtcaacgtctgtccctatctgtagcaatggctcaccactaattggacgaatcattttc
tctcgagaacggctagcagcgtgtgctacggttagttgcaagaaacctcgggtgctgagg
caaaagtctgaccatggggcttttagccagagtccagccatgaagaagcagtttgacagg
caccttccctccccccctgcattagacagcatcatcacagagtacctgagggaacagcat
gcacgctgtaagaaccctgtggcaacatgcccacctttctctctcttcaccccccatcaa
tgccctgagcccaaacagaggcgccaagcacctatcaactttacatcccgacacacacgg
agggttatatatcctaaatatggaggagtggatggaggctgctttgacagacatctcatc
ttcagtaggttccgtcccatctccgtgttcagggaggcagacgaagatgagagtgggttc
atgtgttgtgccttctcagctcgcgagcggttcctgatgctcgggacgtgcacagggcag
ctcaaactctacaatgtgtttacaggccaggaggaagccagctacagctgtcacagttca
gccatcactcacctggagccctcacgggatggctctctgctcttaacatcagcctcttgg
agttaccctctgtctgcactgtggggcatgaagtcagtcttcatcatgaagcattctttt
ctgggcgaccattatgtggaattcagtaagctttcacaagatcgtgtcattgggactaag
gaacatatagcaaggatttatgacatccagacaggtcaggtaacgctgactctaaacaac
ccagacctggctaataactacaagaggaactgcgccaccttcaacccaacagatgacctt
gtgctcaatgatggtgtgttgtgggatgtgcgcacggctcaggccatccacaagtttgac
aagttcaatatgaacatcagtggtgtgttccatcccaatggcctggaggtcattgtaaac
acagaaatttgggatctgcgtaccttccacctcctccacaccgttcccgctctggaccag
tgcagaatagtcttcaacaacaatggcactgtcatctatggagcaatgttgcaggctgac
gatgaagatgacatgatggagatgcagatgaaaagtccatttggttcatcattcaggacc
tttaatgccacggactacaaaccaattgccactattgatgtcaagaggaatatttttgac
ctttgcactgataccaaagactgctacctagctgtgattgagaaccaagactctgtaaac
actgacacagtgtgcagactatatgaagttggcaggcagagacttgcagaggaagaggag
gaggacgaggatgatcagcaggatgacgatcaggaagaagatgatgacgatgatgaagat
tcagacgacgacgttgatacagatccccttatcgctgagccagagaatgagaacggcgga
gaggatgaggatgatgaagaggaggacgatggaaatgatgaattctctccctctgatgaa
gaggtggcacgcattctcgaagaagatgtagacgttggggacgacgatgatgaggatgac
aatgatgaggatgactctgataatgacgacgtcaatctggatggcgacaatgacagttcc
gacaactctgacctggaggatgacatcatcttatccctgaatgagtga
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integrated database retrieval system
