Etheostoma cragini (Arkansas darter): 117947447
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Entry
117947447 CDS
T07493
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117947447 (irx5a)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117947447 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
117947447
NCBI-ProteinID:
XP_034732281
LinkDB
All DBs
Position
1:complement(27655541..27659235)
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AA seq
458 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSAADAAAAATFTSYVVSKLKSSPYDHTTGMAGSIGYHPYAAPLGTYPYGDPAY
RKNATRDATATLKAWLGEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
MTWTPRNRSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEADHKLLNPGDIGCDRFKEE
SHGKDTDPLLSDSELKDQEERTTELLPDSAKPTTSSPSAVPRGNQTLAEQDKPSDLSHAP
GTVTSNVTSVIHSPPSAPKPKLWSLAEIATSSDRCKSSGETPQACPGLGQSAVMSTNASP
SRSSPQCPLPNSTVLSRPLYYTSPFYPGYTNYGGSFGHLHSNHGSVTTGSTAHFNGLNQT
VLNRAEALVRESQRVRGQTQVDLCKDSPYELKKGMSNI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcaaggctacttgtaccagccgtccgcttctctagccctgtattcgtgc
cctgcgtacagcaccagtgtgatttcgggacccagaaccgaggaacttgggagatcctct
tcaggatctgcttttgcaccatatgccggatctaccgcgttcaccagcgcctcgccaggc
tacaactcccacttaccctacagtgctgcagacgcggcagcagctgctacattcacctcg
tacgtggtgagtaaactaaagagctctccctatgaccacactacgggtatggccggctca
ataggataccacccttacgcagcacccttgggcacctacccttatggtgacccggcatac
cgtaaaaacgcaacccgggacgccactgccaccctgaaggcctggctcggcgagcaccgc
aaaaatccttatccaaccaagggagaaaagatcatgctggccatcatcaccaaaatgacc
ctcacccaggtgtccacctggttcgccaacgccaggaggagactaaagaaggagaacaag
atgacctggaccccccggaaccggagcgaggacgaggaggaggacgagaatattgatttg
gagaaaaacgacgacgacgagccaaacaagcccaccgacaagggagactccacagacaca
gaagcagatcataaactgctgaacccaggggatataggctgtgacagatttaaagaggag
agccatggcaaagacacggatccccttctgagcgactcggagttaaaagaccaggaggag
cggactactgagttgctgccggattccgcaaaaccaaccacttcgtctccctcggcggtg
cctcgggggaaccagaccttagcggaacaagacaagccgtcagatttgagccatgcaccg
ggtacggtgaccagcaacgtgacctctgttatccactcgcccccttcggcccctaaaccc
aaactctggtcccttgcggagatcgccacgtcctcagacaggtgtaaaagcagcggcgag
acgccacaggcctgccctggtttgggtcagagcgcagtaatgagcaccaacgcgtctccg
tcccggtcctccccgcagtgcccgctccccaacagcacggtgctatccaggcccctgtac
tacacttcccctttctaccccggctacacgaactatggtggcagttttggacatcttcac
agtaaccacggctcggtaaccacgggctccacggcacatttcaatggattaaaccagact
gtgttaaatagggcagaggctttggtaagagagagccaaagagtcagaggccaaacgcag
gtagatctttgtaaagactccccttatgaactaaagaaaggtatgtcaaacatttaa
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