Etheostoma cragini (Arkansas darter): 117947528
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Entry
117947528 CDS
T07493
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ecra01001
]
117947528 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117947528 (trim33)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117947528 (trim33)
Protein kinases [BR:
ecra01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
117947528 (trim33)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117947528 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
UvrA_inter
Motif
Other DBs
NCBI-GeneID:
117947528
NCBI-ProteinID:
XP_034732424
LinkDB
All DBs
Position
7:21943462..21969987
Genome browser
AA seq
1208 aa
AA seq
DB search
MADNKGEEDMEPSANSDSVPLTQDNEQPETKVENAVIVIEANSNGDEETESHDNVNEAPT
PTSDGGDVVSGGVVGAGGEANGSASSAVSPAGTSSSSAEPTATVTLTTGDVPVGGLTTEM
SPPPTAPAATPVPTPINFLDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPQPDRQISVQ
VAGPHGQTDTHIVNVMRCSVCHQDYKQSDIIDNYFVKDTTEATSASDEKAAQVCTSCEDN
AGTIGFCVECGEWLCKTCVEAHQRVKITKDHKIHTKEDADAASESVGTPGQRPVFCPVHK
QEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGLIETSVAKLQEKKNYVHYS
VSQVQSRLKELNETHKKVEHEIKIAVFTLINEINKKGKSLLQQLETVTKERSMRLVSQHK
DTTLLAQQIHHVLNFCQWAITTGSSTALLYSKRLILFQLRQLFKARLEPAPQANGVVRFF
CDPTFWAKNVVNLGNLVIEKPPQPVQPPGVMVGGPPISPGQGHHGKHPGQINLAQLRMQH
MQQAAYAQQKQQHQHQQQQQQQHQQQIQQQMRIASQMSQQHVRQAGPPMGQQQPPRLISM
QQMPRGPGGMNGGPGPPLYPSSHHMRLPGPPQSRMPTAQPRHNGQQYPAMMQPQLQRQMS
IESEMSHQRFRFLLQSGHSNPGHAGPFPVASLHNANPTSPTSASMAGAHAHRGPASPIIG
PIELIPSVTNPENLPCLPEIPPIQLEDAGSSNLGHLLSRYITASTQHHLGSVDMNPSPGL
STHSPGSSGLSNAHTPARPSSTSSTGSRGSCSSAGKAGPGGGGSVEQVRVKKEPGTDDSY
GCPASSLKTERGKDAGRSACMMSSPEDSPLPVLGVVTAGQDALKALGEHIKTEPQSETPC
SGLNGSNAATSCSFTTTMTTTTSLSSENSSSTAGTLLTNGNSDKGTETKGDGASAGTGNS
GGKEDDPNEDWCAVCINGGDLLCCDRCPKVFHMKCHVPTIKIFPTGDFLCTFCRSLTIPE
IEYCDDSNKIKREQGLSPENQRKCERLLLHIFCHELSVGFREPVPSSVPNYYKIIKHPMD
LKKVKKRLQLRSSQYYKSIQEFVSDMRLVFTNCANYNEMSRIIQVYDEEKQINTQVGSEM
AISGKAVSLYFEEKLQEMFPGQSFPETPESEAPDTKEKEEEDTDDSEGDFIQPRRKRLKT
DEKVVHIK
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcggataacaaaggcgaggaggatatggaaccgtctgctaattcggactcagtgcct
ttaacgcaagataacgagcagccagagacgaaagtagaaaatgcagtaatagtcatagaa
gcgaattcaaacggcgatgaagaaacagagtcccatgataacgttaacgaggcacctaca
cccactagcgacgggggagacgtcgtcagcggtggggttgttggtgcgggcggggaagcc
aatggtagcgctagcagcgccgtcagcccggctgggactagcagcagcagtgcagaacca
acagcaactgtaaccctgactaccggggatgttccagttggcggactcacaactgaaatg
tccccccctcctacggctccggcagccacgccggtaccaactcccattaattttttggat
acctgcgcggtgtgtaaacaaagtcttcagacccgagactgtgaaccgaaacttctacct
tgtctgcactctttttgtcttaaatgtatcccgcaaccagataggcagataagtgtgcag
gtggctggaccacacggacaaactgacacacacatagtaaatgttatgcggtgttcagtg
tgccaccaggactacaaacagagtgacattattgacaactactttgtcaaagataccaca
gaggccaccagcgcgtctgatgaaaaggctgcacaggtgtgcacaagctgcgaggacaac
gcaggaaccataggcttttgtgtggagtgcggagaatggctgtgtaagacctgtgtggag
gcccaccaaagggtcaaaattaccaaggaccacaagatccacacaaaggaggatgctgac
gctgcctctgagtctgttggtacgcctggacagaggcctgttttctgtcccgtccacaag
caggagccactgaagcttttctgtgagacctgtgacactttgacctgtagggactgtcag
ctgctggagcacaaggagcacaggtaccagttcctggaggaggctttccagaaccagaaa
ggcctaattgagaccagcgtggccaaactacaggaaaagaaaaactacgtccattactct
gtttctcaagtgcaaagcaggttaaaagagctgaatgagacacacaagaaggtggagcac
gagatcaaaatcgcagtatttacgcttattaatgagatcaacaagaaggggaaatccttg
ctgcagcagttggagactgtgaccaaggaacgcagtatgaggcttgtgtctcaacataaa
gataccaccctgctggctcaacagatccatcatgtgctcaacttctgtcaatgggccatc
actactggcagcagcacagcgctgctctacagcaagaggctgatcctgttccaacttcgc
cagctcttcaaggctagactggagccagccccccaggccaatggagttgtgcgcttcttc
tgtgaccccaccttctgggccaaaaacgtggtgaatctaggtaatttggtaatcgagaag
ccaccccaacctgtgcaaccgcccggtgtgatggtaggaggaccccctatttctccaggc
caaggtcaccatggcaaacacccaggacagatcaacctggcccagctccggatgcagcac
atgcagcaggcggcctatgcacagcaaaagcaacagcatcagcatcagcaacaacaacaa
caacagcaccagcagcagatccagcaacagatgcgcattgcctcccaaatgtcccagcag
cacgtcagacaggccggtccaccaatgggtcagcagcagcctccaaggctcatcagtatg
cagcagatgccaagagggcctggcggtatgaatggtgggccaggtccccccttgtatcct
tcctcccatcatatgcgtctcccaggtccaccgcagagccgaatgcccacggctcagccg
agacataatggacagcagtatcctgccatgatgcaacctcagctacagagacagatgtct
atagaatctgagatgagccaccaaaggtttcgtttcttactacaatcagggcattccaac
ccaggacatgccggccctttcccggtggcttccctccataatgccaaccccacgagtccc
accagtgccagtatggcaggtgcccatgctcaccgtggccctgccagccccatcataggt
cctatcgagctcatcccctccgtcaccaaccctgagaacctgccctgcctacctgagatc
ccacccattcagctagaggatgcaggttcaagcaatcttggacacctcctgtctcgctac
atcacagccagcacgcagcatcacctcggctcagtggacatgaatccctcacctggactg
tccacacactctcctggatcttcaggtctgtcgaatgcccacacaccagcacgaccttct
agcacgtccagcacaggcagcagaggcagctgtagctctgcggggaaggcagggccagga
ggtggaggatcggtggagcaggtgagggtgaagaaggagcctggtacagacgacagctat
ggctgtccagcttcttctctgaagacggagaggggcaaagatgccggaaggagtgcttgc
atgatgagcagtccggaggacagtccccttcctgtcttgggagttgtaactgctggtcaa
gatgctctcaaggctttaggggagcacatcaaaacagaaccccaatctgagaccccttgt
tctggacttaatggctccaatgctgccacctcctgttctttcactaccactatgaccacc
actacctcgttatcctccgagaacagcagcagcacggcggggactctacttactaatgga
aactccgacaaggggacagagaccaaaggggacggggcgtctgctggaacaggcaattct
ggtgggaaagaggacgaccccaatgaagactggtgtgctgtttgcatcaacggtggtgat
ctgctgtgctgtgaccgctgccccaaagtgttccacatgaaatgccatgtacccaccata
aaaatcttcccaacgggtgactttctctgcacattttgccggagtctaaccatcccagag
atagaatactgtgatgacagcaacaaaatcaaaagagaacagggcctgagtcctgagaac
caacggaaatgtgaacgcctcttgctgcacatcttctgtcatgagctcagtgtgggcttc
agggagcctgttccaagctctgtgccaaactactacaagattatcaagcaccccatggat
ctgaagaaggtgaagaagaggttgcagttacggagctcccagtactacaaatccatccag
gagtttgtgtctgatatgcgcctggtcttcacaaactgtgcaaattacaatgagatgtct
cgaataatccaggtttatgatgaggagaaacagattaatacgcaggtgggatcagagatg
gcgatatccggcaaggcagtaagcctgtactttgaggagaagctgcaggagatgttccca
gggcagagcttccctgaaacacctgaaagcgaggccccggacacaaaggaaaaggaggag
gaagacacagacgactctgagggggatttcatacagccaagacgtaaacgattaaaaaca
gatgagaaagtggtccacatcaagtga
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