Etheostoma cragini (Arkansas darter): 117947530
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Entry
117947530 CDS
T07493
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117947530 (irx6a)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117947530 (irx6a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
117947530
NCBI-ProteinID:
XP_034732433
LinkDB
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Position
1:complement(27517147..27522945)
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AA seq
511 aa
AA seq
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MVTKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVSDGTAGTQTAAAAAAAAAT
FCCPSYENRLLASSRTELNAALGMYSSPYAAAAAASQNYANYFPYSTDPSAIYSTLNPQY
DIKDSTGTLHSGITQTAAYYPYDHSLGQYQYDRYGTVDFNGTARRKNATRETTSTLKTWL
YEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKATDDRKDD
FNKSEQDCVTKDSSDCKEEKDLHLSDLDDMDDDDCDKLDSDCEKVAADEHDLQRVMAVSG
APQKRDCSSELHLSLTNNFHAFPCAIKSATTLPPLPSDFLDPVLSKAPSLTGPAGTVSLS
HFEASDKPRIWSLARTAASGVILSPQQHGSEQRTGNTTGDCQLQSARLTGALTGHCGAMR
GLHESGSATNTESPFSDGSSLHSKVYGTGSYSHKDIQLHCSSYAALPDTCQYSTIEGFSG
GKAETQSTDLSEACGTVQDDKVTAFRPVMKR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaagaagcagcaatgtctttctctcaatttggatacccctacaatgcaact
tcccagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtctctgacgggacagccggcacccagaccgccgctgccgccgccgccgccgctgccacc
ttctgctgcccgtcctatgagaaccggctcctggcgagcagccggacggagctgaacgca
gcgctggggatgtacagctcaccgtacgccgcagcggctgccgccagccagaattacgcc
aactacttcccctacagcaccgacccatccgctatctactccactctgaatccacagtat
gacattaaggacagcacaggcactttacactctggcatcactcaaaccgctgcatactat
ccatatgaccattcacttggacagtatcaatatgacagatacgggacagtggactttaat
ggcacagccagaagaaagaacgcaactcgtgaaaccaccagcactctgaaaacatggttg
tatgagcatcgcaagaacccctacccaaccaagggagagaagatcatgctggccatcatc
accaaaatgaccctcacccaggtgtccacttggttcgccaacgccaggaggagactaaag
aaggagaacaagatgacctggtcaccaaagaataaggccaccgatgacaggaaggatgac
tttaacaagagcgagcaagattgtgtcaccaaagattctagtgattgcaaggaggagaag
gatctgcatctgagtgatctagatgacatggatgatgacgactgtgacaagctggacagt
gactgtgaaaaggtggctgccgatgagcacgacctccagagggtcatggcggtatctgga
gcccctcaaaagagagactgcagctccgagttgcacctgagtttaactaacaacttccac
gcattcccctgcgccatcaaaagtgccaccaccctccctcctcttccgtctgacttcctg
gatcctgtgttgtctaaggcaccctccttgaccggccccgcaggaacagtgtccctgtct
cactttgaagcatctgataagcctcggatttggtctctggcacgtacggcggcttccggg
gtcatactgagccctcagcagcatggctcggagcagaggacaggcaacaccacaggggac
tgccagctccagagcgccaggcttacgggggctcttactggacattgtggggccatgaga
ggcctccatgaatctggcagtgccaccaatactgagagcccgttctctgatggctcatcc
ttgcactcaaaagtttatggcactggcagctacagtcacaaggacatccaactgcactgt
tcatcctatgctgcactcccagacacatgtcagtactccactattgaaggattctctggt
ggcaaagcagagacacagtcaactgacctgagtgaagcatgcgggaccgtgcaggatgac
aaggtcactgcgtttagaccggtgatgaagaggtga
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