KEGG   Etheostoma cragini (Arkansas darter): 117947557
Entry
117947557         CDS       T07493                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117947557 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecra03041]
    117947557 (bcas2)
   03400 DNA repair and recombination proteins [BR:ecra03400]
    117947557 (bcas2)
Spliceosome [BR:ecra03041]
 Complex B
  Other components
   Prp19 complex
    117947557 (bcas2)
 Complex C
   Prp19-CDC5 complex
    117947557 (bcas2)
DNA repair and recombination proteins [BR:ecra03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    117947557 (bcas2)
SSDB
Motif
Pfam: BCAS2 RRP36 CALCOCO1 Cep57_CLD BRISC_FAM175B_helical THOC7
Other DBs
NCBI-GeneID: 117947557
NCBI-ProteinID: XP_034732492
LinkDB
Position
7:complement(21938050..21941810)
AA seq 225 aa
MAGTASVAGEVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYLTTPDFTT
FETEIMRNEFERLAARQPMDLLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IDNLELMLQYGTNAWKVYNNNLAFMIETAQKELQKFRKQIQDLNWQRKNDQLAGGAKLRE
LESNWVSLVSKNFEIERAIVQLENEVTQLRQQQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggccggaacggcttcagtagctggtgaagtgttcgtcgatgctttgccttattttgac
caaggttacgatgcagcaggtgtcagagaagcggctgcagcgttggtggaggaggagacc
agaagatacagacctaccaaaaactacctgagctacttgaccacacctgacttcactact
tttgagacagaaattatgaggaatgaatttgagcgtctggcggctcgacagcccatggat
ctcctgagcatgaagagatatgagctacctgcaccctcatcaggacagaagaatgacatc
acagcgtggcaggagtgtgtgaacaactcaatggcccagctagagcaccaggctgtccgc
attgacaacctggagctcatgttgcagtatggaaccaacgcatggaaggtctacaacaat
aacttggccttcatgattgagaccgctcaaaaggaacttcagaaattcaggaagcagatt
caagatttaaactggcagcgtaagaatgatcagttagccggaggagccaaactgcgagaa
ctggagtcaaactgggtgtctctggtcagtaagaactttgagatcgagagggccatcgtc
cagctggagaatgaagtaactcagctgagacaacagcagggcgacgagaacaaggagaac
atcagacaggacttctag

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