Etheostoma cragini (Arkansas darter): 117947615
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Entry
117947615 CDS
T07493
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117947615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117947615
03036 Chromosome and associated proteins [BR:
ecra03036
]
117947615
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117947615
Coactivators
SAGA/TFTC/STAGA complex
117947615
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117947615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
117947615
NCBI-ProteinID:
XP_034732596
LinkDB
All DBs
Position
1:29003498..29086856
Genome browser
AA seq
1084 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLADQSNPAGKTDENGGAGSVAPANHHLGK
TLPAPVGTTTLEQQQQGRRYKPEMRQEIKSKDVSLEKSVTSPSLGCTPSFGEPPTTSAAC
VNATSSGSQSHGASITTLTASGVSTLAPTPASISTASSRGSKVSPGTDETSTEANPPRKR
ITTPRRSASARIKSLNGAAVTTRRNSNTAVADNVNVSSVDTTATDVTPNCSSPGTCSINT
STFTLSNANLPVGQSAIALDRGTPTIALHRLPSHIVASIAQNGNGTNVSALVQQVARIGP
ITSSTSQGDHSKTVTETGASKTDDCQSKIVMSSQSGNVNSVISTVPSAPSVVTPTTTTAS
ATTTTTLTQPLSTATAAVSVTGVTASSVCGTGQTTSVTTTISMVRPTAPSPTPAVTTSAQ
SQPRPGLTAPQRIVAPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVPQQALA
QAQAQAQAQAQAQAQNNISPRPATPTTGASFRVTTPQSPVTSQTTRQCALTPAKMIPSPS
PTPSSPALQTSSSSASSSSSSSSCPALRPKAPVAPAVAVTAPQQTPVVMAPQAPAQAASQ
PVQPPQTGITANPGGPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKSLVQDL
LDAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSPTPLPQQGVKPAP
GGPPPAIVAGPAVRIRHPNSVSITTGASALPAGTLGHAAGMGIKTAGAVSGQVRMPVVIT
QSVRAQGTMGKGGIIQAGKSPVGFSVHYSGNQKNKLNDPGGGSFRDDDDINDVASMAGVN
LNEESARILATNSELVGTHIRSCKDEAFLHPGLLHRRILETAKKFGVTEVPMEAVTFISH
ATQSRLRTVVEKVSTIAQHRLDSCKDDECYEQSADVRSQLRFFEQLERMEKQRKDEQERE
ILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKMDSPG
NTPSGTEVSGSTAGSPVSSSTPSTSSRQYTRQRITRVNLRDLIFYMEQERETAHSLLLYR
ALLK
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagaggtggatgaaaaagct
gtgagcgacctagtgggctcgttggagtcacagcttgctgaccaaagcaaccccgcaggt
aaaacagacgaaaacggaggcgctggctcagtggcccccgctaaccatcacttaggaaaa
acgctgccagctccagtgggcaccacaacactagaacaacaacaacaaggacggcgttat
aaacctgaaatgcgccaggagataaagtctaaagacgttagcctggagaaaagtgtcaca
tctccttctctgggctgtaccccttcttttggcgagcctcccaccacttcggctgcttgt
gtgaacgccaccagcagcggttcgcaatcacatggagcatccatcacaacactgactgca
tctggtgtgtcaactttggctccaacgccagccagcatcagcaccgcatccagccggggg
tctaaggttagccccggtacagatgagacgtcgacagaggctaacccaccgagaaaacgc
ataaccacaccaaggaggagcgcttcggctcggataaagagtttgaacggcgcagctgta
acgactagaaggaacagcaacacagcggtggctgacaacgttaacgttagctctgtagat
actactgcaactgacgttacaccaaactgttcttcaccgggcacatgctctattaacact
tcgactttcaccctatcaaacgctaacctccccgtagggcagtcggctattgctctggac
cgggggactcctaccattgctttgcatagacttccgagtcatattgtagcgagtatagcc
caaaacggaaacgggactaatgtttcggccttggtccagcaggttgctcgcatcggaccc
atcacctcctcaacttcccagggggaccacagcaaaacagtcacagaaactggggcttcc
aaaacagatgattgtcagtccaaaattgtaatgtcaagccagtctggtaatgtcaactct
gtaataagcactgttccctctgcgccttctgttgtcacaccaacaacaaccacagcatca
gctacaaccaccacaacactaacccagcctttgagcactgctacagctgctgttagtgtt
acaggggtgacagcaagttctgtatgtggaactggtcaaactacatcagtgactaccact
attagcatggtcaggcccacagccccctccccaacacccgctgtgaccacctccgcacag
tctcagccccgtcctggacttacagcacctcaaaggattgtagccccccagctgattgtc
agaccacctcagcagcagacgaccatacagctgccccctgggtttaccatccccccgggg
atggtgttggtacgcacggagttgggtcagctagtgatggttcctcagcaggctttggct
caggctcaggctcaagctcaggctcaggctcaggctcaggcccagaacaacatctctcca
cgaccagccacccccacaacaggagcatctttcagagtaacaactccgcagtctcctgtg
acctctcagaccacaaggcagtgtgctttgaccccggccaagatgataccgtctccctct
cctactccttccagccctgcccttcagacttcttcctcttctgcttcctcctcctcctcc
tcttcctcttgtcctgcactccgcccaaaggcccccgtggcaccggccgtggctgtgacg
gctccgcagcagacccctgtggttatggccccccaggccccggcccaggctgcctcccag
ccagtgcagcctccgcagacgggcatcaccgcgaaccccggaggtcctgtcgtgtcccag
gaaatgcaagagaatgtcaagaagtgtaagaatttcctggccacgcttatcaagctggcg
tctcacaactctccgtcacctgagacttccaagaacgtcaaatctctggttcaggacctg
ctggatgcaaagattgaaccggaggagttcaccagccggctgcagaccgagctcaaatcg
tctccacagccttacctggtgccttttctcaagaagagcctcccggccctgaggctatct
ttgctgaatagtcagcagtccccaaccccgctcccgcagcagggagtcaaaccagcaccc
ggcggcccccctcctgccattgtggctgggccagctgtccgcatacgccaccctaacagt
gtcagcatcactacgggtgctagtgctctgcccgctgggactctcggacatgcagctggc
atgggtatcaagacagcaggcgctgtcagtggccaggtccggatgcccgtggtgatcaca
cagtctgtcagagcgcaaggcacaatggggaagggaggcatcatccaagcaggcaaaagt
cccgtgggcttttctgttcactactctgggaatcagaaaaacaagctcaacgaccccgga
ggaggttctttcagggatgatgatgacatcaatgacgtagcctccatggccggggtgaac
ctgaatgaggagagcgcaagaatactcgccaccaactctgaactagtgggaacgcacatc
cgctcatgtaaagacgaggcctttctccatccgggacttctccatcgacgaattctggaa
acagctaagaagtttggcgtcacagaggtccctatggaggcggttacattcatctcacat
gccacacagtcacgacttcgaactgttgtagaaaaggtttctaccatcgcacagcaccga
ctggactcttgtaaggatgacgagtgctacgagcagtcggcagacgtccgctctcagctt
cgattttttgagcagctggagagaatggagaagcagaggaaggacgagcaggagagagag
atcctgttgaaagccgctaaaagtcgctccaggcaagaggacccagagcaagctcgactg
aaacagaaagctaaggagatgcaacaacaggaactggcacagatgaggcagcgagatgcc
aaccttacagcacttgccgccatcggaccccgcaaaaaacgtaaaatggattcaccaggg
aacaccccatcagggaccgaggtttctggcagtacggcgggctccccggtcagctcctcc
accccgtccacctcatcacgccagtacacacggcaacgcatcactcgcgtcaacctcagg
gacttaattttctacatggagcaggagagagagaccgcccactccctcctcctttaccgc
gccctgctcaagtag
DBGET
integrated database retrieval system
