Etheostoma cragini (Arkansas darter): 117947677
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Entry
117947677 CDS
T07493
Symbol
zgc:193690
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
ecra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117947677 (zgc:193690)
03015 mRNA surveillance pathway
117947677 (zgc:193690)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117947677 (zgc:193690)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117947677 (zgc:193690)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117947677 (zgc:193690)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117947677
NCBI-ProteinID:
XP_034732713
LinkDB
All DBs
Position
7:5989248..5995592
Genome browser
AA seq
487 aa
AA seq
DB search
MSEDSWAVAVDFQEATNPSTQFDFSKKVERVLGPRNIRRDINGNLLPEKTENGGSKKDTE
KVDLAEQSLLNKMIRRSLVRNRNQVEVLQRDPTSPLYSVKTFEELRLKPELLNGVYNLGF
NRPSRIQENALPMMLAQPPQNLIAQSQSGTGKTAAFSLAMLSHVNPDNKWTQCLCIAPTY
ELALQIGQVIEQMGAFCPDVKLAYGIRGNRPERGVKLQEQIVIGTPGTVLDWCTKYKLVD
PKKITMFVLDEADVMIATQGHRDQSIRIHRQLTKDCQMLLFSATFEDSVWRFAEQVVPDP
NIIRLKREEETLDTIKQFYVLCREKEDKFTALCNLYGSLTIAQAMIFCHTRKMAAWLTAN
LTNEGHQVALLSGELTVEQRAAVIDRFRNGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPV
DMDGNADNETYLHRIGRTGRFGKRGFAVNMVDSKHSMDVINQIEMHFNRRITKLDTSNLE
EMESLIS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagactcgtgggcggttgctgtcgactttcaagaagccacaaatccatcaaca
cagtttgacttctcaaagaaagttgagcgagtgcttggccctcgtaacataagaagagac
ataaatggcaacttattgccagagaagactgaaaatggaggttcgaaaaaagacacagag
aaagtggacctggcggaacaatccctgttaaataagatgatccggcgctctctggtgcgg
aacagaaaccaggtggaagtcctgcagcgggaccccacctctcctctttactccgtcaag
acattcgaagagctgagactgaaacctgagctgctgaatggtgtgtacaacctggggttc
aacagaccatccaggatccaggagaacgccttgcccatgatgttggcacagccacctcag
aatctgatcgcccagtcccagtctggcacgggtaaaaccgctgctttttctcttgccatg
ctcagccatgtaaacccggacaataagtggacccagtgcctttgcatcgcaccaacatat
gagctcgctctgcagatcggccaagtaatcgagcagatgggggcattctgccccgatgtg
aaactggcttacggcattcggggcaacagaccggagcgaggcgtcaagttgcaggagcag
attgtcatcggaacaccaggcacagtcctcgactggtgcaccaagtacaagctcgttgac
cccaagaagattacgatgtttgtgctcgacgaggctgatgtgatgatcgccacgcaaggc
catcgggaccagagcattcggatccacagacagctgaccaaggactgccagatgctcctt
ttctctgcaacctttgaggactctgtgtggaggtttgcagagcaggtggttcccgatccc
aacatcatcaggctgaagcgtgaagaggagacactggacacaatcaagcagttctatgtg
ctctgtagggagaaggaggacaagttcacagcactctgtaatctctatggaagccttacc
attgcacaggccatgatcttctgccatactcgcaagatggctgcttggctgactgcaaac
ctgaccaacgagggccaccaggtggccttgctgagcggggaattgaccgtggagcagagg
gctgccgtcatcgatcgcttcaggaacggcaaggagaaggtcctggtgaccacaaacgtg
tgctccaggggtattgatgtggaacaagtgtctctcgtggtcaactttgacctccctgtg
gacatggatgggaacgccgacaacgagacctaccttcaccggattggccgcacaggacgc
tttggcaaaagaggatttgctgtcaatatggttgacagtaaacacagcatggatgtcatc
aaccaaattgagatgcatttcaaccggagaatcacgaaacttgacaccagcaatctcgaa
gaaatggaaagcctgatcagctga
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