Etheostoma cragini (Arkansas darter): 117947751
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Entry
117947751 CDS
T07493
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecule (CAM) interaction
ecra04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117947751 (l1cama)
04517 IgSF CAM signaling
117947751 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117947751 (l1cama)
04090 CD molecules [BR:
ecra04090
]
117947751 (l1cama)
04091 Lectins [BR:
ecra04091
]
117947751 (l1cama)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
L1 family
117947751 (l1cama)
CD molecules [BR:
ecra04090
]
Proteins
117947751 (l1cama)
Lectins [BR:
ecra04091
]
I-type lectins (Siglecs)
117947751 (l1cama)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
Bravo_FIGEY
C2-set_2
Pur_ac_phosph_N
C2-set_3
Ig_5
Fn3_ROS1
Ig_PDGFR_d4
VEGFR1-3_N_Ig-like
Ig_C17orf99
Fn3_VIN3
Ig_J
Motif
Other DBs
NCBI-GeneID:
117947751
NCBI-ProteinID:
XP_034732878
LinkDB
All DBs
Position
7:complement(15227868..15267178)
Genome browser
AA seq
1277 aa
AA seq
DB search
MPHTQRQQVCSRGQCSSLLLRLLLLLSLAAQPSQAAIHIPSNYHISDLKRPPMIITHPES
VTVFSVEDLVMSCEASGNPLPIFRWTKDGEEFDPGSDPELKVSERPGSFAFYTLSNTMDN
LKQYQAKYVCYASNELGTAVSNEATLTTDVPPSQQKEKKVNVKSEEGNSIVLKCNPPPSS
MEPIIHWMDWRLHHIQLSERVVVGKDGNLYFAHLTTEDNRNDYTCNVQYLATRTILAKEP
ITLTVNPSNSVLRNRRPHMMRPTGSHSTYHALRGQTVELECIAQGLPTPQVSWLRKDGEM
SESRTIKEMFNRRLRISNISESDGGEYQCIAENSQGKATHTYTVAVEAAPYWIKEPLSQL
YAPGETVRLDCLADGIPSPTISWTINGIPLSETDKDSRRSLTASGSLILKDVNFGDTAIY
QCQASNKHGTILINTNVYVIELPPQILTEDGNTYIVPEGKKALLECETFGSPKPKVIWES
SSTSSLLADPRMNPLTNGVLEIFNVTHDDSGFYTCSVQNTNLSVTVELEVLNRTVILSPP
QDLKVQRGNTTIFTCLALVDPKLGSPQIQWRKNDKKIFDSHSNEKYTVDGPELKITNVEE
DDEAVYTCQVITKLDMAEASGTLTIWDSPDPPVHLQITNPKHRSVTLSWTPGDDHNSPVL
EYVVEFEDQGSKERGWEELKRVTGKKERVSLSLWPYMSYRFRVIAINYVGKSNPSRPSEI
HNTPAEAPDNNPEDVRSVSEDPDTLVITWEEMDKRNFNGPDFKYRVFWRRVVGSGPNWHT
NYTTTSPFTVNDIGNFSAFEIKVQAVNGKGDGPEPDPVIGYSGENVPLEAPMNVVVELLN
STTIRVNWEAVDKETVRGHLLGYKVYLTRSSSMGHHRGWGPREPESTVVVETGPTEDKKV
ISDLRPYSHYALAVTVFNSKGEGPPSETDSFRTPEGVPGPPMSLMLDSPSETEMTLHWTP
PGQPNGVLIGYLLQYQQIVESDDNPMQVLKIDDPTASHLTLEGLDHHSHYRFFLRGYTAA
GDGEPIMREAATTLDGVPPADIHLSVGENFVNLSWVAKKRHRNVSFQVHYLNKNDGSKWK
KTEKVNTSQSFYQLQGLTPGSHYRLLFTYSNTTFLETEIKTEGTGVTEVQPSFATQGWFI
GVVSAIVLLLLILLILCFIKRSKGGKYSVKDKEEGPMDSEARPMKDETFGEYRSLESDLE
EKRTASLPSLGEESKLCSEDNLDFNGSSAITTELNMDESLVSQFSRPSAGPEALQGLPDN
SLLNPTNGMPNSVTILD
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacacgcagcgacagcaggtttgcagtagggggcagtgctcctctctcctactc
cgcctcctcctcctcctctcccttgctgcccagcccagccaagcagccatacacataccc
tccaactaccacataagtgatctcaagaggcctccaatgatcatcacacatccggagtct
gtcaccgtcttcagtgttgaagacctcgtcatgagctgtgaagcctccggcaaccctcta
cccattttccgatggacaaaggatggagaggagtttgacccaggcagtgacccagagctg
aaggtttctgagcgccctggttcatttgcattctacacactcagtaatactatggacaac
ctgaagcagtaccaagccaaatatgtctgctatgcatccaatgagctggggacagccgtc
tctaacgaagccacactcacgactgatgttcccccatcccagcagaaagaaaaaaaggtg
aatgtgaagtctgaagagggaaacagtatcgttctgaagtgtaaccccccaccgagctct
atggagcctatcattcactggatggactggaggcttcaccatatccagctgagtgaacgg
gtggtggtggggaaggatggcaacctatactttgcccatctgacaactgaagataacagg
aatgactacacctgcaatgtccagtacctggcgacacgcaccattctggcaaaggaaccc
atcactctgactgtaaacccctccaactctgtgctgcggaacaggaggccccacatgatg
agacctactggaagccacagcacttaccatgctctcaggggccagactgtggagcttgag
tgcattgcccaaggccttccaactccccaagtttcgtggctgaggaaggacggcgagatg
tctgaatctcggaccattaaagaaatgtttaaccgccgcctgcgaatcagtaatatctca
gagagtgacgggggcgagtaccagtgtatagctgagaactcccaagggaaggccacacac
acttacactgtggctgtggaagcggctccatactggatcaaggagccactcagtcagtta
tatgccccaggtgagactgtcaggctagactgcctggcagacggcatcccctctcctacc
atcagctggacgatcaatgggatccccctctcagaaaccgacaaggactccagacgttcg
ctaacagcaagtggatctctaatcctaaaggatgtcaactttggagacactgccatctac
cagtgccaggcctccaacaagcatggaaccattctcatcaacaccaatgtctacgtcatt
gagctgcctccccagatccttactgaggatgggaatacatacatagttccagagggcaag
aaggctttactggagtgtgaaacctttggctctcctaaacccaaagtcatatgggagagc
agcagcacctcctcccttctggcagatcccagaatgaacccgctcaccaacggagtgctt
gagatctttaatgtcacccacgatgattcgggcttctacacctgctctgtacagaacacc
aacttgtctgtcactgttgaactggaagtgctcaacagaacagtgatcctgtcacctcca
caggatctgaaggtgcagcgtggaaacacaacaatcttcacttgcctggccctcgttgac
cctaaactcggctctccacaaattcagtggagaaaaaacgataaaaagatatttgactcc
cacagtaatgaaaaatacacagttgatggaccagagctgaaaataactaatgtggaagaa
gatgatgaggctgtgtacacatgtcaggtcatcactaagcttgacatggctgaagccagt
ggcactctcaccatatgggatagtccagaccctcctgtccacctccagatcactaaccct
aagcatcgttcagtcaccctcagctggactcctggagatgaccacaacagccctgtgcta
gagtatgtggttgagtttgaggaccaaggttcgaaggagagaggttgggaagagctgaag
agagtaacgggaaagaaggagcgtgttagcctatctctgtggccctatatgtcctaccgt
ttccgggtcattgccatcaattatgtgggaaagagcaaccctagcaggccatctgaaatc
cacaacacacctgctgaagctccagacaataacccagaagatgttaggagtgtgtccgaa
gacccagacactctggtcatcacctgggaggaaatggacaaacgtaacttcaatgggcct
gacttcaagtatcgggtgttctggaggcgagtggtgggcagtgggcccaactggcacacc
aactacacaaccacatctccattcacagtcaatgacattggcaacttttctgcattcgag
atcaaagttcaggctgtcaatggaaaaggggacggacctgagccagacccagtcattggc
tactcaggagaaaatgttcctttggaggccccaatgaatgtcgttgttgaactactgaac
agcactaccatcagagtgaactgggaagcagtagacaaagagacggtcagaggacacctg
ctgggatacaaggtgtacttgaccagaagcagctccatgggccaccaccgaggctggggg
cccagggagccggagagcactgtggtggtggagactgggcccaccgaggacaagaaagtg
atcagtgatctcagaccatactcccactacgccctggctgtaactgtattcaacagcaag
ggagagggacccccctctgagactgattccttcaggactcctgagggagttcctggtcct
cccatgtccctgatgctggacagcccatcagagacagaaatgaccctccactggacacct
cctggccaacccaatggagtccttattggatatctactgcagtaccaacagattgtggag
agtgatgacaaccccatgcaggttttgaaaatagacgaccccacagccagccaccttacc
ctggaaggcctggaccaccacagccactatcgcttcttcctgaggggatacactgctgca
ggggacggagagcccatcatgagggaggctgccaccacactggatggagtgcctcctgcc
gacatccacctgtctgttggggaaaactttgtcaacctcagctgggtggccaagaaaaga
cacaggaatgttagcttccaggtccactacctcaacaaaaatgatggcagtaaatggaag
aaaacagagaaagtgaacacctctcagtctttctaccagctccagggcctgactcccgga
tctcattatcgtctactcttcacctacagcaacaccactttcttggagactgaaatcaag
acagaaggaacaggagtgacggaggtgcagccaagctttgcaacgcagggctggttcatt
ggtgttgtgagtgccattgtgctgctgctactgattctgctcatcctctgtttcatcaaa
aggagtaaaggggggaagtattcagtgaaagataaagaagagggtccaatggactcagaa
gcacggcccatgaaggatgagacttttggagagtacagatccctagaaagtgacctcgag
gagaagcgcacggccagcctgccgtcgctgggcgaggagagcaagctgtgcagcgaggac
aacctggacttcaacggcagtagtgccataaccactgagctcaacatggatgagtctctg
gtcagccagttcagtcggcccagcgcaggtcctgaggcactgcagggcctgccagacaac
tccctgctcaaccccaccaatggcatgcccaactcagtcaccatcctcgattaa
DBGET
integrated database retrieval system
