Etheostoma cragini (Arkansas darter): 117947830
Help
Entry
117947830 CDS
T07493
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117947830
Spliceosome [BR:
ecra03041
]
Common components
Common spliceosomal components
General mRNP proteins
117947830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
117947830
NCBI-ProteinID:
XP_034733025
LinkDB
All DBs
Position
7:11074754..11082222
Genome browser
AA seq
536 aa
AA seq
DB search
MADDFDVEAMLEAPFRKTSLMISHLYSHEFIFDSTVNCEKKDEIKSSHANGHDDQNKKKK
RSRSKSRSPGSRRRRSRSKDKKKGKKRSKSRERKRSRSRERHRSSSRSKERSGRYRARKS
PLRKRSKSRSPVKKEKSPIRNFEDAIGPYNKIREQPIDNLTPEERDARTVFCMQLAARIR
ARDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVESSSVPLAIGLTGQRLLGVPIIV
QASQAEKNRAAAAANNLQKGSSGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDS
ETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELE
RTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQMTGSIPFGNISAQTSVPTPTPSQAL
NLPSQPLATHCLQLSNLFNPQSENDPSWAVEIQDDVIEECNKHGGIVHIYVDKNSAQGNV
YVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTAKQLLMPARR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgttgaggccatgctggaggctccattcagaaagacttcccta
atgatatctcacctctactcccatgaattcatctttgattccactgtgaactgtgaaaaa
aaggatgagatcaagtcctctcatgcaaatggacatgacgaccaaaacaaaaagaaaaag
aggagccgaagcaagagccgaagcccgggctctaggaggagaagaagcagaagcaaagac
aaaaagaagggtaagaagaggagcaagagcagagaaagaaaacgaagccgcagcagagag
cgtcatcgcagcagctcccgaagcaaggagcgttctggccggtacagagcacgcaagagc
ccacttcggaaacgttccaaaagtcggagccctgtaaaaaaagagaagagtcccatcaga
aattttgaggatgctatcgggccgtataacaaaatcagggagcaaccaattgataattta
acacccgaggagagggatgcccgcacagttttctgtatgcagctcgctgcaagaatcaga
gctcgagacctggaagatttcttctcagctgttggaaaagtaagagatgtgagaatgatc
tcagacagaaactccaggagatcaaagggcatcgcttacatagagtttgtggagtcctct
tctgtaccactggccattggattgactggccagaggcttttaggagtgcccatcatcgtc
caggcatctcaggcagagaaaaatagagctgcagctgctgccaacaatctacagaagggc
agctccggtccaatgaggctgtacgtgggctccctgcacttcaacattactgaagaaatg
cttcgagggatctttgagccttttggaaagattgagggaatccagctaatgatggacagt
gaaactggacgatccaaaggatatggcttcatatcgtttgcagatgcagaatgtgcaaaa
aaggccttggagcaactcaatggctttgagctggccggacgtccgatgaaggtggggcat
gttacagagcgctcagactcatcgacggccagctcattcctggacaacgacgaacttgag
aggactggcatcgacctgggaaccacagggcgtctacagctaatggctcgactagcagaa
ggaactggtctgaaaatccctcccgctgctcagcaggctctacagatgactgggtccata
ccctttggaaacatttctgctcaaacctctgttccaactccaactccaagccaagccttg
aacctcccttcacagccgttggcaacacactgccttcagctgtccaacctgttcaaccca
caatctgaaaatgatcccagctgggcggttgagatccaagatgatgttattgaagagtgc
aacaaacatggaggaattgttcacatctatgttgataaaaactctgctcaaggtaatgtg
tatgtgaagtgtccctcaataccagcagcaatggccactgtgaatgcacttcatggacgc
tggtttgcaggcaaaatgataacggctgcctacgttcccttaccaacctaccacaacctt
ttccctgattctgtaacggcgaagcagctcctaatgccggcacgccgatag
DBGET
integrated database retrieval system
