Etheostoma cragini (Arkansas darter): 117947848
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Entry
117947848 CDS
T07493
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117947848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117947848
03036 Chromosome and associated proteins [BR:
ecra03036
]
117947848
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117947848
Coactivators
SAGA/TFTC/STAGA complex
117947848
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117947848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
117947848
NCBI-ProteinID:
XP_034733061
LinkDB
All DBs
Position
7:complement(9808762..9823819)
Genome browser
AA seq
971 aa
AA seq
DB search
MRLTSERSLAKMAAGSDLLDDVFFNTDVDEKVVSDLVGSLESELTGAERVNTTSRVQSVA
NHAANSTVGNGSNSNVQGLGGSKMGLSQQELAKAGTGVQGGVINSTGSHGSSMDGAAGTT
SSMPAAQSQSKPGTASGVVTVVSDTASGVGKPGTTGVQTLNGSNVVMNCHITGGTSGTNS
QPAGTLVNNGPVSVSKGSATVLSATPSTIIRNSSTSAQNAVISSQSSVKSLPTVTLVRPP
MQTNTSQSGGNQTTVLTSPAVTVTSTAGSLVNKFDSTKAVMQTGAYVVASGVAAGTIATV
RSPTVLQNVRTSVPSTIAATPGGIRAIAPQALAPRLTQPQQNAPNIQNIQLPPGMVLVRS
ESGQLLVIHQQTLAQMQAQSQSQSAMTPRPAAPTSTPPVQITSLQAPGASLLARPVTPTA
IIKQGSTVQTTVTTSTTLQRPPVQQNTIMLGGTAPTPGQPLGTATTVQSGSVATAVTQRT
TATPTAVTAETLEIVKKCRNFLSTLIKLASTGKQSSETTANVKELVKNLLEAKIEPEDFT
SRLYRELNSSPQPYLVPFLKRSLPALRQMTPDPEAFIQQSLLPLPSTHPAAAVSTALTAV
MLRPPLSTTTSTAATKTTVISLPQTPHSKPGLIVPQQQGTMVRPQVTLAQSPMVTLRGQS
HSRIIVGQPQVVKQLQTAGKQTLAPGAKGVHVVSQAPLTAAQKNKLREAGGGTFRDDDDI
NDVASMAGVNLSEESARILATNSELVGIVTRSCKDETFLSTSLLTRRALEIGKRFGVGEL
GADVINYISLATQQRLQNLLEKVSQVAQQKNTTFKEDERYELVSDVRTQLKFFEQLDQME
KQRKEEQEREILLKAAKSRSRQEDPEQLRLKQKAKEMQQQELAQIRQREANLTALAAIGP
RKKRKTDSPVRGASAEGSGSGPSQPGGSSGAGSRQFMRQRITRVNLRDLLFCLENERGTS
HSHLLYKGFLK
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcacgagcgaacgtagcttggcaaagatggcggcgggctccgatttgctggat
gatgttttcttcaacacagatgtggacgaaaaagtagttagtgatctagtcggatctctg
gagtctgaactaacgggagcagagcgtgttaacacaacgagcagggttcagtctgtagca
aatcacgctgccaactcgactgtaggtaacggtagtaattccaatgtccagggtcttgga
ggcagcaaaatgggactttcacaacaagagcttgctaaagcagggacgggagtgcaagga
ggtgtcatcaacagtacgggttcccacggttcaagcatggatggagcagccgggaccaca
tcgagcatgccagccgctcagagtcagtctaagcctgggacagctagcggagtcgtaacg
gtcgtatcagatacagcatctggtgttgggaaacctggaacgactggtgttcaaacttta
aatggaagtaacgttgtgatgaactgtcatatcaccggaggcaccagcggcaccaactca
cagcccgctggcacgcttgtcaacaacggacctgtgtcagtgagcaagggaagcgcaaca
gttttgtctgcaacaccaagtactattattcgaaattcttcgacgagtgcgcagaatgct
gtgatttcctctcagtcctctgtgaaaagcttacccactgtcacgcttgtgaggccacct
atgcaaactaacacctcacaaagcggagggaaccaaaccacagttttgacatcacccgct
gtaactgttaccagcacggctggctcgctcgtcaacaaattcgactccacaaaagctgta
atgcagaccggtgcgtacgtcgtggcgtctggtgttgcggcagggacaatagcgaccgtg
aggagcccgactgttttgcaaaacgtgaggacttcagttccgtcaacaatcgctgctact
cctggtgggatacgagccattgctccacaggcgttggcccctcggctcactcagcctcaa
caaaatgccccaaatatccaaaacatccagctccctccaggcatggtcttggttcgcagt
gagagtgggcagctgcttgtgattcaccagcagaccttggctcagatgcaagctcagtcg
cagtcccaaagcgccatgacgccacgacctgcggcccccaccagcactccacctgtccag
atcacttcgctacaggctccgggcgcgtcactactggctcgtccggttacccccaccgcc
attattaaacaaggttccacagtccagaccactgtgacaacctctaccacactgcagagg
ccgcctgtacagcagaacaccatcatgctgggaggaactgcccccaccccgggacagccg
cttggaacagccaccacagtgcagtctggttctgtagcaacagcagttacacagaggacc
actgccactccaacagctgtcacagctgagacacttgagatcgtaaaaaagtgtagaaac
tttctgtccacgttgatcaagttggcatccactgggaaacagtcctctgagactacggcc
aatgtcaaggagctggtcaagaaccttctggaagcgaagatagagcctgaagatttcacc
agtaggttataccgggagctcaactcctcaccacagccctaccttgtgcctttcctgaag
agaagtctcccagcactgcgtcagatgaccccagacccagaggccttcatccagcagagc
ctgctgcctctgcccagcactcaccccgctgcagcagtctccacggccctcaccgcggtg
atgctgcgacctcctctctccacgaccaccagcactgcagcgaccaaaaccacagttatc
agcctccctcagacacctcacagtaaacctggactgatagtgccccagcaacaggggaca
atggtgaggccacaggtgacgctggctcagtctcccatggtaacactcagaggacaatct
catagccgtatcattgtgggccagccgcaagtggtcaaacagctacagacagcagggaag
cagacattggctccgggggccaaaggagtgcatgtagtcagtcaggcccctctcacagct
gctcagaagaacaagctgagggaagcaggagggggaaccttcagagatgatgatgacatc
aatgatgtggcctccatggcaggggtcaacttgtcagaggagagtgcccgtatcttagca
accaattctgagcttgttggcatagtgactcgttcttgtaaggatgagaccttcctctcc
acctctttacttacacggagagctctggagattggtaagcggtttggtgtcggcgagttg
ggcgcagatgtgatcaactacatttccctcgctacacagcagcgactacaaaacctgctg
gaaaaggtgtcacaagtggcacagcagaaaaacacaactttcaaggaggatgagcggtat
gagctggtaagcgatgtgcgaacccagcttaaattcttcgagcagcttgatcagatggag
aagcaaaggaaggaagagcaggagagagagattctcctcaaggctgccaagtctcgttca
cggcaagaggaccctgagcagctcagactaaaacagaaggccaaagagatgcagcagcag
gagctggctcagatcagacagagagaagccaacctaacggcgctggcagcaatcggtccg
aggaaaaaacggaaaactgactctcctgtaaggggcgccagtgcagagggctcagggtca
ggcccctctcagcctggaggctccagtggagcaggctccagacagtttatgcgacagcgc
atcaccagagtcaacctcagggacctgctcttctgcctggagaatgaaagagggaccagt
cactcacacctgctctataaaggcttcctcaaatag
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