Etheostoma cragini (Arkansas darter): 117948000
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Entry
117948000 CDS
T07493
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117948000 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117948000 (exosc10)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
117948000 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
117948000
NCBI-ProteinID:
XP_034733317
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All DBs
Position
7:complement(17528128..17540194)
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AA seq
906 aa
AA seq
DB search
MHVHSSSKLSMDTSKNKYSTNSGIQETNSDTNDEEKNDLCPGFKDADAFVKYGLGAVLSA
TKASTSLPQTGDEYDFYRSFPGFQEFCESQGDKLLHCMSQIMQHHGCRSRMRDRNKLTGL
EERFDLVVDSNDVILERVGILLDEADGVNRNQQPVMPAEFQPPKIVVSSWNRMGSSSGSR
SETFRLLQAKNIARPQMKFKEKVDNSNTPFIPKIFIKPNAVKPLPSYFTNKQIRKERPED
LDVPAALADFIHQQRTQEHVEDMFAHPYQYELDHLKIPESVLSKPEPQMYKPLTETKCSF
IDTLEDLVALNEKLCKLSEFAVDLEHHSYRSFLGLTCLIQISSREEDFIIDAIELRSELY
ILNEAFTDPAIVKVFHGADSDIEWLQRDFGLYVVNLFDTHQASRALNLARHSLDHLLKHF
CSVNSEKRYQLADWRIRPLPDEMVQYARMDTHYLLYIYDCVRVQLLDFNHGQPGLLQSVW
NKSKDISLKKYTKPIFTEESYLELQSKQKKSFNTQQLTAFRLLFAWRDKLARQEDESTGF
TLPTHMMNKISEELPKEPQGIIACCNPVPPLVRQQVNELHLLVQQAREMPLLKAEIAAEK
KKGLTPIKKPEVTMFGPHDTSRVSEINPQHCSSDDVPVKQGVLFTEDEPKMDVDVQKTSS
LMAAAKITQFEELETQNDHKFLSVTQMKARRIIECFENPFRMYLPSSDVHISKNAKFDPS
SKIFEISKRWKLLSIEQQQKELEAKKEANRKAKEEAKEHTKKVAEERNQAKQSYQESLQD
VATVRQQAAESAKGAGKKRERVASEVGESTPKPRKKQMKSAEKPQTTEPPPQDSFKPFDY
NQSDLKVFAGTKSKDNTQFDPNRQAHGFKKKKTPRGQKSNSGAGSRSMSYMAGKSERGFR
HNWPKR
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtacacagcagctccaaactgagtatggatacttcaaagaataaatactccaca
aacagtggcattcaagaaaccaattcagataccaacgacgaggaaaaaaacgacttgtgt
cccggttttaaagacgcggatgcttttgttaaatatggattgggtgctgttttatccgca
actaaagcatccacaagcttgcctcaaactggagatgaatatgatttctatcggagcttc
ccgggcttccaggagttctgtgaaagtcaaggagataagctcttgcactgcatgagtcag
ataatgcagcaccatggctgcagatcgcgcatgagagaccggaataagctgacggggctg
gaggagaggtttgacttggttgtggactcgaacgacgtcatcctcgaaagagtggggatt
cttctcgatgaagctgatggggtgaacaggaaccagcagcctgtcatgcctgcagagttt
cagcctcccaagatagttgtttccagctggaatcgcatgggttcaagctctggcagtcgt
tctgagaccttccgactgctccaagccaagaatattgctaggcctcagatgaaattcaag
gaaaaagttgacaacagcaacacaccatttattccgaagatcttcatcaagcccaatgca
gtaaagcctcttccttcgtatttcaccaacaaacaaatccgtaaagagagacccgaggac
cttgatgtcccggctgctctggctgacttcattcaccagcagagaactcaagaacacgtt
gaagacatgtttgcacacccataccaatatgaactggatcatcttaaaataccagaaagt
gttctatccaagccagaaccgcagatgtacaaaccgttgactgagaccaaatgctccttc
attgacacactggaggatctggtagcgctgaatgagaagctttgcaagttgtctgaattt
gcagtggaccttgagcaccactcctacaggagtttcctcggcctcacctgtctgatacag
atctccagcagagaggaggacttcattattgacgccattgagctccgcagcgagttgtac
atcctcaacgaggcattcactgacccggctattgtcaaggtatttcacggcgctgactct
gacattgagtggctccagagggactttggcttgtatgtcgtcaacctgtttgacacgcat
caggcgagccgagctctgaacctggccagacattccctcgaccacctgctcaaacacttc
tgcagtgtgaactcagagaaacgctaccagctggccgactggaggattcgccccttgcca
gatgagatggtgcagtatgcccggatggacacccactacctcctttacatctatgactgt
gtgagggtgcagctgctggactttaaccacgggcagcctggcctgctgcagagtgtctgg
aacaagagcaaagacatttctctgaagaaatacacaaagcctatattcacagaggagtca
tatttggagctgcagagtaagcagaaaaagtcttttaacacccagcagctcactgccttc
agactgctgtttgcctggagggacaagctggccaggcaggaagatgaaagcacgggattc
accttgcccactcacatgatgaacaagatatctgaggagctgcccaaagagcctcagggc
atcattgcctgctgtaaccctgtacccccgctggtcaggcagcaggtcaatgagctccat
ttgttagtgcagcaagccagagaaatgcctctccttaaggctgagattgcagctgaaaag
aagaaaggactcacgcccataaaaaagccagaggtcacaatgtttggtcctcatgataca
tccagggtctctgagattaatccccagcactgttcttctgatgatgtgcctgtcaaacaa
ggggtgctcttcacagaggatgagcccaagatggatgttgatgtgcagaaaacaagtagt
ctaatggcagcagctaaaatcacacagtttgaggagctggaaacacagaatgaccacaag
ttcctctctgtgactcagatgaaagccagacgtatcattgagtgttttgaaaatcctttc
agaatgtacttaccctccagtgatgtgcacatcagcaagaatgccaagtttgacccttct
tcaaaaatatttgagattagtaaaagatggaaactcctgagtattgaacagcaacagaag
gagttggaggccaagaaggaggccaataggaaagccaaggaagaagcaaaggaacacaca
aagaaagtggcagaggaaagaaaccaggccaaacagagctaccaggagtctctccaggac
gttgccactgttcgccagcaggcagcggaatctgcaaaaggtgctggaaagaaaagagag
cgggtcgccagtgaggttggagagtcgactcccaaaccacgtaagaagcagatgaaatct
gcagagaagccccaaacgacagaaccgccgccccaagacagcttcaagccttttgactac
aatcagtcagacctcaaagtcttcgctggtacaaaatccaaagacaacacccagtttgat
ccaaaccgacaagcccatggttttaagaaaaagaaaactcccaggggacaaaaatccaat
agtggagctggaagccgaagtatgtcgtacatggctggaaaatctgagagaggattccgg
cacaactggcccaaaagataa
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