KEGG   Etheostoma cragini (Arkansas darter): 117948025
Entry
117948025         CDS       T07493                                 
Name
(RefSeq) charged multivesicular body protein 4b-like
  KO
K12194  charged multivesicular body protein 4A/B
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03250  Viral life cycle - HIV-1
ecra03272  Virion - Hepatitis viruses
ecra04144  Endocytosis
ecra04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117948025
   03272 Virion - Hepatitis viruses
    117948025
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117948025
  09143 Cell growth and death
   04217 Necroptosis
    117948025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecra04131]
    117948025
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecra04147]
    117948025
Membrane trafficking [BR:ecra04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    117948025
Exosome [BR:ecra04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117948025
  Exosomal proteins of other body fluids (saliva and urine)
   117948025
  Exosomal proteins of colorectal cancer cells
   117948025
SSDB
Motif
Pfam: Snf7 SYF2 Decapeptide TPR_Epg5_C DUF6437 DUF6689
Other DBs
NCBI-GeneID: 117948025
NCBI-ProteinID: XP_034733349
LinkDB
Position
7:19398794..19404288
AA seq 222 aa
MSLLAKIFGGGGKGGKGPSPQEAIQKLRETEEMLTKKQEFLEKKIDQELQIAKKNGTKNK
RAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKSAHEN
MDIDKVDDLMQDITEQQELAQEISDAISKPVGFGEEFDEDELLAELDELEQEELDKNLLE
IGGPENAPLPNVPSTSLPSRPAKKEEDEDDMEDLQRWAMEAM
NT seq 669 nt   +upstreamnt  +downstreamnt
atgtcgttgttggctaagatatttggaggaggaggaaaaggaggaaagggaccgagccca
caggaggcgatccagaaactccgagagacggaggaaatgctaacgaagaaacaggaattt
ctagagaaaaagatcgatcaggaactacaaattgccaagaaaaacggcacgaaaaacaaa
agagcggctctgcaagctttgaaaagaaagaagcggtatgagaagcagctcgctcagatc
gacggcacgctgtcaaccatcgagttccagagagaggctctggagaatgccaacaccaac
actgaagtgctcaaaaacatgggctttgctgccaaggccatgaagtctgcccatgaaaac
atggacattgacaaggtggacgacctgatgcaagacattaccgagcagcaggagctggcc
caggaaatctctgacgccatctctaaacctgtcggctttggagaggagtttgatgaggat
gagctgctggccgagttggatgagctggaacaggaggagctggacaaaaacctgctggag
atcgggggaccagagaacgcccccctccccaacgtgccttctacttcattaccttccaga
cctgccaagaaagaggaggacgaggacgatatggaggacctgcagcgctgggcaatggaa
gccatgtaa

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