Etheostoma cragini (Arkansas darter): 117948077
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Entry
117948077 CDS
T07493
Symbol
pym1
Name
(RefSeq) partner of Y14 and mago
KO
K14294
partner of Y14 and mago
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
ecra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117948077 (pym1)
03015 mRNA surveillance pathway
117948077 (pym1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117948077 (pym1)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117948077 (pym1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
Caudo_TAP
MMPL
FAM176
Motif
Other DBs
NCBI-GeneID:
117948077
NCBI-ProteinID:
XP_034733418
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Position
7:complement(2428677..2434702)
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AA seq
228 aa
AA seq
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MSNVTHQPSEGSGATRNTKMATPYVTDESGKYIAATQRPDGTWRKPRRVKDGYTPQEEVP
VYENKFVKFFKSKPDLPPGMNPSEGAPTKQLQKIPGCGDSETAGLSKSAKRNMKRKEKRK
HQQHQDGDADVDVDSVSDAVENVSISDCAASSNKTKAPASVPSPDDSSAEAAEKAKKIKG
LRKKLRQVEELQLKVDSGEITEPTKDQLEKLGRVKILQDELQQLERDS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgttacccaccaaccgagtgaggggagcggggcaacacgtaacaccaaaatg
gcaaccccctatgtcacagatgaatctgggaaatacatagctgccactcagcgacctgat
ggaacatggaggaagccgaggcgggtgaaggatggttataccccccaggaagaagtgcca
gtctacgaaaacaagtttgtgaagtttttcaagagcaaaccggaccttccacccgggatg
aacccgtcggagggcgctccgacaaagcagctgcaaaagatccccggctgcggggacagt
gagaccgccggtctgtcaaagtctgccaaacgcaacatgaaacgcaaagaaaaacggaaa
caccagcagcaccaggacggcgacgcggacgtggacgtggactcggtgagcgacgccgtc
gagaacgtgtccatttcagactgcgcggcgtcttcgaacaagacgaaggcgccggcttct
gtcccgtcgcccgacgattcgtcggcagaagcagccgaaaaggccaagaagatcaaaggc
ctgagaaagaagctgcggcaagttgaggaattgcagctgaaggtggactcgggggaaata
acagagccaacaaaggatcagttggaaaagctgggccgggttaagatcttacaagatgag
ttacagcagctcgagcgtgactcttga
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