Etheostoma cragini (Arkansas darter): 117948125
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Entry
117948125 CDS
T07493
Symbol
nr1h5
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5 isoform X1
KO
K08538
farnesoid X receptor beta
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117948125 (nr1h5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ecra03310
]
117948125 (nr1h5)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117948125 (nr1h5)
Nuclear receptors [BR:
ecra03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
117948125 (nr1h5)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117948125
NCBI-ProteinID:
XP_034733497
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Position
7:21979171..21992702
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AA seq
497 aa
AA seq
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MREWTELEMSFSAGGFLSASDGYCSTEQLQYYDMLADPLGYPLQDPDLQLLPYSQQQYSP
ANLSFSLYASPPSSTSSSSSSSQPCHPQYHYSPHCPEAPCDPGPEPHCGGLAQGLGMVGL
PLGRRTRVGSGGKSRGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYQCKSG
GGCEMDMYMRRKCQDCRLRKCRAVGMLAECLLTEVQCQSKRLRKGGKGRGQEEEEKTESR
RVSSTSKLPGQALSASLTQEQKYIVDRMVEAHRLYRAQDSGHCRLFEFPCTEEVGGLSDV
LSPHLQRLLQFARTVPGFDHLDFSDQSCLLSVSSLEIMFLISAQQFSHNPSSPCPALQIF
RMTTHNWLRNAESKENIYSRTQVNSGGSEDLLGPVLNFFHSMATLRVTDVEYTLLTATAL
LCSALCPCPADRASLQAAGCVEKIQELILDLLSRVCGAQAGAARGGPQRFGRLLGRLTEI
RTLHHNYLVLTRQPQVH
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggactgagttggagatgagcttttcggcaggggggtttctctctgcctcg
gatggttactgctccacagagcagctccagtattatgacatgctggctgaccctctgggc
tacccccttcaggacccagacctccagcttctcccttacagccagcaacagtacagccca
gccaacctgtccttttccctttatgcctctccaccttcctccacctcttcctcctcttcc
tcttcgcagccctgccatccgcagtaccactacagccctcattgcccggaggccccctgt
gatcccggccccgagccccactgcgggggcctggctcaggggctcggaatggtgggactg
cccctggggcggaggacacgggtcgggtcgggagggaagagcagaggccaggaagagctg
tgtgtggtgtgcggagacaaagcgtcagggtatcactacaacgctctcacctgcgaggga
tgcaaaggtttctttaggcgtagtgtgacaaaaaaggctgtgtatcagtgtaagagtggc
ggtggctgtgagatggacatgtacatgagaaggaagtgccaagactgtcggctgaggaag
tgccgcgccgtgggaatgctggctgagtgccttctgacggaggtgcagtgccagtccaaa
cgactgaggaaaggaggtaaaggcagaggacaggaagaagaggagaaaacagagagcagg
agggtcagctctaccagcaagctacctggacaggctctgtctgccagtttaacccaagaa
caaaagtacattgtggacaggatggtggaggcccatcgactgtacagggcacaggacagc
ggccactgcaggttgtttgagtttccctgtacagaagaagtggggggcttgtctgatgtt
ttatcaccccacctgcaaagactgctacagtttgccaggacagtgccaggttttgaccac
ctggatttttctgaccagagttgtctcctgtctgtgtcttcactggagatcatgtttctg
atctcagctcaacagttctcccacaacccatcaagcccctgtccagccctgcaaattttc
agaatgacaacacacaactggctgagaaatgcagagtcaaaggaaaacatctacagtagg
acgcaggtcaactcaggtgggagtgaggatctccttgggccggtgcttaacttcttccac
agcatggcaacgctgcgggtgacagatgttgaatacaccctgctcactgcaacagctctt
ctctgctcagctctgtgtccctgtcccgcagatcgcgcgtccctgcaggctgccggctgc
gttgagaaaatccaggagctgatccttgacctgctgtccagggtgtgtggggcccaggct
ggagctgcgcgagggggacctcagaggtttgggcgcttgctgggcagactgacggagata
cgaaccctccatcacaactaccttgtcctgacgagacagccgcaagtacactga
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