Etheostoma cragini (Arkansas darter): 117948140
Help
Entry
117948140 CDS
T07493
Symbol
asxl1
Name
(RefSeq) polycomb group protein ASXL1 isoform X1
KO
K11471
additional sex combs-like protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117948140 (asxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117948140 (asxl1)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
117948140 (asxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
TT_ORF1
Motif
Other DBs
NCBI-GeneID:
117948140
NCBI-ProteinID:
XP_034733528
LinkDB
All DBs
Position
7:4315289..4335273
Genome browser
AA seq
1557 aa
AA seq
DB search
MKDKQKRKKERTWAEAARMVLENFSDAPMTPKQILHVIQTKGLKEMRSGTAPLACLVTML
HSQVRGDRVKNSIFFKLPGRMSLFTLKKNALQWTKTTSESETSTELASSTAPPASSSSTP
AASTTVASVGPTEATEQESCDSTETTAAASGDNDASVDESSSSASCSTEVPAPSSQPQTR
LSRAAGQQGRIEAQQSQHAPHTQTRLSRSRQSGRQRKKAVMMPRVVLTPLKVNGEHVPQG
PIRRSRGGVDVDFETPGSILVNTNIRALINVRTFSAFPTHSQQQLLQLLPEVDRQIGPDG
MARLSSSALNNEFFTHASQSWKERLAEGEFTHEMQVRFRQEMEKEKKVEAWKEKFFEEYH
GQKSGLTQEESLKLTMSEASEVAASVLDSDVAVVATGAPKRRSVGRRRRDGRMRRRTRAD
LRRRARRTLCKATPPAMQPAEIAEARAALEIPAVSMGSPMSDNTIVQDEVVLQSECGVEL
PAESAAIEPKPSPTPEPVTLPASTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPSPS
PSPSPASTSANEEPEAVARLLPEEAAPVLASTSSPSSSSSSSSSSSSSSSSASSPVSSPS
SPSDRQGAFAAGLDSSSSSSASSSAAVVADPLDDTASVVTSITGGTATSSRESSPSASPT
TTPAPSAQPKEQKRRPEETQAFSSFPEKRPRLDDRQSFRTTIDGVRSEKPQPTTEEPKVP
PIRIQLSRIKPPWVKGHPTYQICPRIVPPGEGSRRSGTGGARTLADIKARAQQARAQREA
AAAVAATGEGTGPDGVRLRPAAGLPDSSNGRRAREHPGPIEPGGGGGGGGRRGGGMEEQG
SSSGTNSSGTQLQLLNVEPTPQPSPSLSTTSTSMSFEPPQTPSPPREEAAGEPEVEEEVE
ATSASVQSSLNGLTDSAANSPSPKPESTPALSEMTDQGCEKPSLAPTSIPDSVPRFGAQG
VDVIQTLASSCQPKEQVQGKDAGLGGVIQHGSHHMEPQEVLSVSVAERRKTGASCLQQVD
SSGEEKYDEAGTHSDSTETASDCENDTQEDEQQQPDRDWCPQLSIQRNGHLVICSPPIQN
QQPVIQAHVSSRQGHTVIQPCFPNGMLHPQHHEDSQPLPIAHPQGLRDTNVVVKMEPGDG
CRVSRQISPEEESCGGLNPSVTPPTAAAASKRLASSARPVSSVEANNPLVTQLLQGSLPL
EKVLPPHSANRLEISRFPGPHPRPPVARISGSCTRPEASAQTPSPELIHNKPPTGCPVSC
LMEAPAASQYQCQQAPGAVPVITSLPPSSSSSLSSRSKLDLSPQTTGECAVPKDSHGPQP
SQIVTPDRPQPAHRTMPNGPSPTNADPCPTEALPMSNINWRPPSHQLQLSPAPTVKNEAG
VRAPCQALAKSSPIKPMSVTKKEPASCVDSYLSGGAMEGLLNMEMTFARMAKKEQGKASY
SAGSPSPSASALPFQLYGKLPKHGSVGGVSYTANVSVLDNGGFSRSMADSVLQLRPRLAS
SQTTLSIQAFADSTAEEVALKCSCRLKAMIMCQGCGAFCHDDCIGPSKLCVSCLVVR
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaacaaaagagaaagaaggagcggacctgggctgaggcagctcgcatggtt
ttggaaaacttctctgatgcaccaatgactcccaaacaaatcctccatgttatccagacc
aaggggctgaaggaaatgcggagtggtacagcccctttggcctgcctggtcaccatgctg
cactcccaggtgaggggagacagagtcaagaacagcatcttcttcaagcttcctggaagg
atgagcctgttcactctcaagaagaacgccctccagtggacaaagacaacatcagagtca
gagacatcaacagagctggccagcagcacggcccccccagcctccagcagcagcacccct
gcagcaagcacaactgtggcctcagttggccccactgaggccacggagcaggaaagctgt
gactcaactgaaaccactgctgctgccagcggagacaatgatgcatcggtggatgagagc
tcgtccagtgcctcgtgctccacagaagtgccggcccccagcagccagccccagacccgc
ctcagcagggccgcaggacaacaaggacgaatagaagcacagcagagccaacatgctcca
cacacccagaccagactaagccgctccagacagtcagggaggcagagaaagaaagcagtc
atgatgcctcgtgttgtcctcacccctcttaaagtgaatggagagcacgttccccaaggg
cccataagaaggagtcggggaggggtggatgtggactttgaaaccccaggctccatcctg
gtcaacaccaacatcagggccctcattaacgtgcggaccttctcagcctttcccacacac
tcgcagcaacagctgctgcagctgctgccagaggtggaccgacagattggaccagatggt
atggccagactgagtagctctgctctgaacaatgagttcttcacccatgcctcccagagc
tggaaagagaggctggcggagggtgagttcacccacgagatgcaggtgcgtttccggcag
gaaatggagaaagagaagaaggtagaggcgtggaaggaaaagttttttgaagaataccat
gggcaaaagtctggcctgacacaagaggagtctctaaagcttaccatgtctgaagccagt
gaagttgcagccagtgtgcttgacagtgatgtggctgtggtggcaactggtgcccccaag
agacgcagtgttggccgacggaggagagacggcaggatgagaagacgcacaagggctgac
ctgcgtaggagggcccgccggaccctctgcaaggccactcctcctgccatgcagcctgcg
gaaatagctgaggcaagagctgcactggaaatcccagcagtttcaatgggctctcccatg
tctgacaacacaattgttcaagatgaggtggtgctgcagtctgagtgtggcgtggagctc
ccagctgagagtgccgccattgagccaaagccctctcccactccagagccagtcacattg
ccagcttccactcccactcctacccccactcctacccccactcctacccccactcctacc
cccactcctacgcccactcctacgcccactcctactcctactcctactcctagtcccagt
cctagccctagcccagcctccaccagtgctaatgaagagcctgaagctgtggcccgcctg
ctcccagaggaggctgcacctgtactggcttccacctcctcaccttcctcttcctcctcc
tcctcctcctcctcctcctcctcttcttcctctgcctcctcaccggtctcctcaccctcc
tcaccttctgataggcagggagcgtttgccgcaggcctggattcttcttcatcctcctca
gcgtcctccagtgccgcagtcgttgccgatcccttggatgacactgcatctgtggtcacc
tccatcacagggggtactgccaccagcagccgtgagagtagcccctcagccagcccaacc
accacccctgcacccagtgctcagcccaaggagcagaagcgaaggcccgaggagactcag
gccttctccagtttccccgaaaagaggccgcggcttgacgaccgtcagtcctttcgtacc
acaattgacggtgtccgttcggagaagccgcagccgacaaccgaggagcccaaggtgccg
cctatcaggattcaactgtccagaatcaaacccccctgggtcaaaggccaccccacctac
cagatctgcccccgcatcgtgccccccggcgagggctcgcggcggtcggggacggggggc
gcgcgcaccctggcggacatcaaagcccgtgcccagcaagcccgggcccaacgcgaggcc
gctgctgctgttgcagccactggcgaggggacagggccggacggggtcaggctgcggcct
gctgctgggctaccggatagcagcaatggacgacgagcgcgagagcacccaggacccatc
gagcccggaggaggaggcggaggaggaggaaggagaggtggagggatggaggagcaggga
tcgtcttcaggcactaattcgtctggaacacaactacagcttctcaatgtagaacccacg
ccccaaccctctccttccctgtccaccacctcaacctccatgtcctttgaacctccacag
accccaagccctcctcgagaagaggcagccggggagccagaggttgaagaagaagtagaa
gcaacatcagctagtgtccagagctccttgaatgggcttacagacagtgcagcaaactca
ccctctccaaagcctgagtctactcctgccctttcagagatgactgaccagggttgtgaa
aagccctcacttgccccaacctcaatcccggattcggttcccaggttcggcgctcagggt
gtggatgttattcagacgttggccagctcttgtcagcccaaggagcaggtacaaggcaag
gatgctggactaggtggtgtaatccagcatggctcccaccacatggaaccccaggaggta
ttatctgtctcagtggcagagagacggaaaacgggtgcatcctgtcttcaacaagtggac
tcctccggtgaagagaaatatgacgaggctgggacacatagcgactccacggaaacagct
tcagactgtgagaatgacacacaagaggatgagcaacaacagcctgaccgcgactggtgt
ccccaactgagcatccagagaaacggccatctggtcatctgtagcccccctattcagaac
cagcagccagtcatccaggcccacgtgtcaagccgccagggtcacactgtcattcagcct
tgctttcccaacggcatgctccaccctcagcaccacgaggacagccagcctctccccata
gcccatccacaggggctcagggatactaatgtggtggtcaaaatggagcctggggatggt
tgtagagtctccagacaaatctctcctgaagaggagtcttgtggagggttaaatccctct
gtcactccccccactgctgcagctgcctccaaaagactggccagctcagccagaccagtg
tccagtgtggaggccaacaaccctttggtcactcagctactgcagggcagcctgcccctg
gagaaggttctacccccccattcagctaacaggctggagatcagccgatttccaggaccc
caccccagaccaccggtggcaaggatctcagggtcttgcaccaggcctgaggcctcagcc
cagacgcccagcccagaactgatccacaacaagcctccaacaggctgccccgtctcgtgt
ctgatggaggccccggctgcatcacagtatcagtgtcagcaggctcccggggctgtcccg
gtcattacttctctgccgccctcctcttccagttccttgtcctccagaagtaagttagac
cttagcccccagaccactggggagtgtgcagttccaaaagactctcatggtcctcagcca
tcacagattgtcactccagacaggccccagccagcccaccggaccatgcctaatggtccc
tctcccaccaatgcagacccctgtcccacagaggccttgcctatgagtaacatcaactgg
cggcccccctctcaccaactgcagctgtctcctgcgcccactgtaaagaatgaagcaggt
gtgcgggccccttgccaggctcttgccaaatcatcccccattaaacccatgagcgttacc
aaaaaggagcctgcgagctgtgtggatagctacctgagcggaggggctatggagggactc
ctcaacatggagatgacttttgccaggatggcaaagaaggagcagggcaaagctagctac
tcggctggctcgccctccccctctgcctcggctcttcccttccagctgtatgggaagctc
cccaagcatggttctgttggaggagtaagctacacagccaatgtgtcagtgctggacaac
ggcggtttctcccggagcatggcagacagtgtgcttcagctgcgcccccgcttggcctcc
agccagaccaccctcagcatccaggcttttgctgacagtacggccgaggaggtggcgctc
aagtgctcgtgccgcctcaaagccatgatcatgtgccaaggctgtggtgccttctgccat
gacgattgcattgggccctccaaactctgtgtgtcctgtctggtggtcagatag
DBGET
integrated database retrieval system
