Etheostoma cragini (Arkansas darter): 117948335
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Entry
117948335 CDS
T07493
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117948335 (lingo1b)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117948335 (lingo1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_9
Ig_2
LRR_Zer-1
LRR_R13L1-DRL21
Ig_C17orf99
LRRNT
V-set
Ig_PDGFR_d4
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
117948335
NCBI-ProteinID:
XP_034733822
LinkDB
All DBs
Position
1:complement(8886503..8908166)
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AA seq
623 aa
AA seq
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MTVLVSSRMVSGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSRCDCNGQERSVVCHR
RRLAALPEGIPTETRMLDLSKNRLKTLGNEEFINYPQLEELQLNENTISSIEPGAFTNLM
NLRTLGLRNNQLKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGYNLASVPTDALSHLHNLLSLRLSYLNVTAMKDYSFKRLY
RLRVLEISQMPALDTMTAKCLFGLNLTSLSITNCNLTVIPYQAISHLRHLRFLNLSFNPI
HTVEGNKLFNLQKLQAFYLAGGRLTTIEPYSFRGLNHLRVLNVSINRLNTLEESVFHSVG
NLETLALYDNPLACDCRLLWVFRRRWRLNFNRQQPMCASPEIVQGQEFKDFPDILPSDYF
ICQKSKIMDYKVQESHVDEGTTVHFDCQAEGDPVPVIMWLSPKKEYITTKTVGSRLSVSN
EGTLEVRYAQIQDNGTYLCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRATVTFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKDNTKSSIEVEYV
PRKEEPEEASPTEEPIQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaagcagtaggatggtgtctggggaggcaggagggcacagctacttg
gtggcatgctggcagcccatcctgatcctcatgctcggcaccgtcctttctggctccacc
accggttgcccctcccgatgtgactgcaacggtcaggagcgttcagtcgtgtgccatcga
cggagactggcagctcttcctgagggcatacccacagaaacaaggatgctggacctcagc
aagaaccgtctcaaaactctggggaacgaggagttcattaattacccccagctggaggag
ctgcaacttaacgaaaacacaatttcatccattgagcctggagcttttaccaatcttatg
aaccttcgaactctaggtctgcgcaacaaccagctgaagctcattcagctgggggtgttc
acaggcctgaccaaccttacccagctggacattagtgagaacaagattgtcattctgctc
gactatatgttccaggagctgtacaacctgagagctctggaggttggtgacaatgaccta
gtattcatctcaccgcgatcgtttcatggcctcagcaaccttgaaagcctcaacatcgag
ggatacaatcttgcctcagtgcccactgatgcccttagccatttgcataacctgttgtca
ctacgattaagctatctcaacgtcactgccatgaaggattactcctttaagaggctgtat
cggctcagagtgttggagatatctcaaatgcctgccctggataccatgaccgcaaaatgc
ttgtttggactcaacctcacatcattgtccatcacaaattgtaatcttactgtcataccc
taccaagccatcagtcacctgagacatctgcggtttttgaatctgtctttcaatcccatt
catactgtggaagggaacaaactgttcaatctgcagaagctgcaggctttttatttggct
ggtgggagattaactaccattgagccctactctttccgaggactcaaccacctccgtgta
ctcaatgtatccatcaacagattgaacaccctagaggagtctgttttccactcagtggga
aacctggagactctggctttgtatgacaacccgttggcctgcgactgtcgcttgctctgg
gtcttccgccggcggtggaggctcaactttaacagacagcagcccatgtgtgcttcacct
gagattgttcaaggacaagagttcaaggacttcccagacattctcccgtctgactatttt
atctgccagaaatcaaagatcatggattacaaggttcaagaaagccatgtagatgaagga
actacagttcattttgactgccaggctgagggtgacccagtccctgtgataatgtggcta
tcccctaagaaagagtacatcactactaaaactgtggggtcaaggctttctgtgtctaat
gaaggcactttggaggtgcgttacgcccaaatccaagacaacggcacctacttgtgcatt
gcaagcaatgcagcaggcaatgacaccaaagctgctcacctttttgtgcatagctattcc
cccaattggccccaccagccaaacaagacatttgccttcatttcaaaccagcccagcgat
gaaggtgctaatgtaacccgggccacagttacatttccatttgatgtaaagacactcatc
attgcaaccactatgggatttatctctttcctcggagttgtccttttctgtcttgtaata
ttatttctctggagtcggggaaaagacaatactaagtcaagtatagaggttgaatatgtg
ccacgtaaagaggaaccagaggaggccagtccaaccgaggaacccatacaattcaacatg
aaaatcatgtga
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