Etheostoma cragini (Arkansas darter): 117948380
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Entry
117948380 CDS
T07493
Symbol
sort1b
Name
(RefSeq) sortilin 1b
KO
K12388
sortilin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117948380 (sort1b)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
DUF6242_C
Motif
Other DBs
NCBI-GeneID:
117948380
NCBI-ProteinID:
XP_034733891
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Position
7:complement(16309808..16323412)
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AA seq
821 aa
AA seq
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MGLLLHCVLLLFVSTFTASLDVQQGSEPFGHSVFLKRSNTGNRAANIVKRSLPAWLAASP
GHNIKRRSTEQGDSCKALQGSDTKLAGNTHSYTFNDLSGSVSLAWVGDGTGVILALTTFQ
VPFFMIKLGQSKLYRSENYGKTFQDVTNLINNTFIRSEFGIAIGKSGKVILTGEVSGGPG
SRIFVSDDFGETFTPRDLPFNPLMQITYNPDNSNVLLVLSNSYELWLSEDFGSNWKKIHD
TVCLVKWGRKNTIFFTANQNGSCTDRGMLELKRSTDYGKTIKTVANKIYSFGLGGRFLFA
SVMTGKGTLRMIYVSVDQGETWNMAQLPPVGHEQFYSILGANDDMVFMHVDEPGDTGFGT
IYVSDDRGTVYSKSLERHLYTTTNGDTDFTNVTSLRGVFITSVLAEDNSVQSVVSFDQGG
EWVPLRKPDNTKCDATAKDPDKCSLHIHAAYSIAMKLNVPMLPLTEPNAVGLILAHGSVG
DAISVMKPDVYVSDDGGYTWMKALDGPHYYAILDSGGLLVAVEKNPTQPINKIKFSTDEG
QCWGTYTFTKEPIYFTGLASEPGARSMNVSVWGYRDSLLSQYWISITIDFRDLLTRDCDH
KDYVQWLAHSDDLSDPNDGCMLGYKEKFLRLRKDAVCWNGRDYQVNTQPTPCLCTLDDFL
CDFGYYRQENSSECVEQPDLKGKVLEFCLHGNEEQLQTSGYRKIPGDKCEGGKMPERKEI
DLSKRCVSDLVGPELLIDSRSSKSVPIVIMVIFVMLLIIAAGVVFIKKYVCGGRFLVHRY
SVLQQHVEDNAVDGMDDPLETNHTQNGKIEFHDDSDEDLLE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggacttttgctgcattgtgtcctgctgttatttgtttccactttcacggccagttta
gatgttcagcagggatccgaacccttcggacactcggtttttttgaagcgttcaaacact
ggcaacagagctgcgaacatcgtaaagaggtctctgcctgcctggctggctgcatcaccg
ggtcacaatataaaacgaagaagcaccgagcagggcgactcctgcaaagctcttcaagga
tctgacaccaagttagcaggcaacacccacagttataccttcaatgacctgagtggatca
gtgtcgctggcctgggttggagatggaacaggggtcatcctggctttgacaacttttcag
gtgcccttcttcatgataaaactggggcagtccaaactctatcgaagtgaaaactacggg
aagacattccaggatgtgaccaacctaatcaacaacaccttcatcagatcagagtttggc
attgccatcggcaaatctgggaaagtgatcctgactggagaagtgtctggaggtcctggg
tctcggatatttgtctcggacgactttggagagacattcaccccacgggacctgcccttt
aaccccctgatgcagatcacatacaaccctgacaattccaatgtgctgctggtcctcagc
aacagctatgaactgtggctgtctgaagattttggcagcaactggaaaaagatccacgac
acggtgtgtcttgtgaaatgggggaggaaaaataccatcttctttacagccaaccagaat
ggatcctgcactgatcgcggaatgctggaactgaagaggtcgacggactatggtaaaacc
attaagactgtcgccaataagatctactcatttggcctgggtggacgcttcctctttgcc
tctgtaatgacaggcaagggcactttgaggatgatctatgtgtcagtggaccagggtgag
acatggaacatggcccagctgccccctgttggtcacgagcagttctactccatcctggga
gcgaacgatgacatggtcttcatgcatgtcgacgagccaggagataccggatttggcacc
atttatgtgtcggatgacaggggcactgtgtactccaaatcattggagcgccacctttac
accaccacgaatggcgatacagacttcactaatgtcacctccctgcgaggagtttttatc
accagtgtcctggcagaagataattcggtgcagtctgtggtgtcctttgatcagggaggg
gaatgggttcccctgcggaaacctgacaacaccaaatgtgatgccacagccaaagaccca
gacaagtgcagtctccacatccacgcagcctacagtattgctatgaaactgaacgtcccc
atgctgcctctgactgaaccaaacgctgtgggtctcatcttggctcatgggagtgttggt
gatgccatctcagtgatgaagcctgatgtgtatgtgtctgatgatgggggttacacctgg
atgaaggcccttgacgggccccattactacgccattctggactctggagggctgctggtt
gctgtggagaaaaaccccacccaacctatcaacaagatcaaattttctactgatgaagga
cagtgctggggtacttacaccttcaccaaagagcccatctactttactgggctggcatca
gagccgggagctcgatccatgaatgtcagtgtgtggggctacagagactccctgctcagc
cagtactggatctccatcaccattgacttcagggatcttctcaccagagactgtgatcac
aaggactacgtgcagtggttggcccactctgatgacctcagtgaccccaatgatggttgc
atgctgggctacaaagagaagtttctgcgtctcaggaaagacgctgtttgctggaacgga
cgagattatcaggtcaacacccagccaaccccgtgtctgtgcaccctggatgacttcctg
tgtgattttggatactaccgtcaagaaaacagctcggagtgtgtggagcagccggacctg
aaaggcaaagtgcttgagttctgtctgcacggcaatgaggaacaactgcagaccagtggc
tataggaaaatccctggagataaatgtgagggaggaaagatgcccgagcgtaaagagata
gacctcagtaagaggtgtgtgagtgacctggtgggccctgaacttctgatagacagtcgc
tcctccaagtctgtacccattgtgataatggtcatctttgtcatgctgctgatcattgca
gccggagttgtcttcatcaagaaatatgtctgtggtggcaggttcttggttcacaggtac
tcggtgctgcagcagcatgttgaggacaatgctgttgacgggatggacgaccctttggag
accaaccacacgcaaaatggcaagatagagtttcacgacgactcagatgaggacctgctc
gaatag
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