Etheostoma cragini (Arkansas darter): 117948389
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Entry
117948389 CDS
T07493
Symbol
nfascb
Name
(RefSeq) LOW QUALITY PROTEIN: neurofascin
KO
K06757
neurofascin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117948389 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117948389 (nfascb)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
L1 family
117948389 (nfascb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
BiPBP_C
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
117948389
NCBI-ProteinID:
XP_034733907
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Position
7:complement(7844133..7859580)
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AA seq
1200 aa
AA seq
DB search
MRENGRVGKEKSSLVPCTVKMGPLLEPALLLLLLWPSVGAFDIPLEIRQPPTIIKQSMKE
HIVDPKDTMVIECEAKGNPHPIFSWRRNGKYFNVARDTQASMRRRSGTLDIYAWNNPEQY
EAEYQCIASNEYGSAYSHKIRLRLYRAPVWPREVLEPVVVSAGLPLVLSCDPPPGPPKPE
IYWMSSCSYARPFNWPIQTAFPTMQPVRQDRRISMGVNGDLYFSNVLFNDSAADYCCNAR
FPYKNVIQQKMPVVVKVLTTRTVSEAAPTWLSPTGSSSSILVLQGEELLLECIAAGMPTP
RITWTKDGDDLVVTSRMKVKNFSKMIQISKASFDDVGEYSCTATNKIGYIEHTITVRVKA
APFWLEKPTNLVLAPEENGRLVCRSDGAPRPTISWFINGEPIETATPQPNRQVAGDTLTL
RSVTAENTAVYQCNASNQYGYLMANAFVNVLHATPRIFGPRNELIKVIEGSRCFLDCRYF
GSPVPELRWSKYGQGNLEGNRFKTHSNGTLEIKHIRIDDQGIYLCVVSNIAGREESQVRV
EVKEPTLIVTRPQSMKVIRGSDVRFECGVKADVTTPVTTSWMKDKKYLTLGWRLSLDESN
LVITNVNRGDEGNYTCVIKSELDQKSASARLMVMDHPDPPTKLELSDPYERTVRLSWVPG
DSNHNPITEYIVQYDDDDWLPGKWRNLSSYPGDLNSVILHLTPFTYYEFRVIAVNAIGMS
RPSRPSTRFQSSGAPPDVIPKNVKGVGTWRNNMEISWEPLTYREWNGPHLKYLVWWRRRE
SREEWKNATTKWARYYIYDADTFTPYDIKVQAVNDFGLGPESPVIIGYSGEDRPLTAPLN
LRVSDIESTQVTLHWDSVTRGSMMGSLKEYKAYYWRDSSQLRWLRVNRGMKSKSFPDNDP
EPSGVLTGLIPYSNYKLYIVVANNRYEGPPSNTIHFSTPEGVPSAPTSFRIQQRHLDSIY
VDWDLPAEPNGIITGYSLKYQTVNATRGEELRVEELTPNITSFSLRRYDRYTRYRFHVAA
RTRIGIGEWHTEESPHYTTETYAQDQVDISTQGWFIGIMCAVALLVLILLIVCFIKRSRG
GKYPVREKKDISLEPVDDKDQDGTFDYRSLERIARVSTLPYPRRDEERGLQRGQSSMEAM
IKRSDSDDSLVDYGEGGEIPFNEDGSFIGQYTGTRRDVRELDFGGSLELHSPMNTIYSLA
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaacggaagagttggtaaagaaaagagtagcttggttccatgcactgtaaag
atgggaccactgctggaaccagcgctgctgctgctgcttttatggccgagtgttggggct
ttcgacatccctctggaaatcaggcagcccccaaccatcataaagcagtcaatgaaggag
catattgttgaccccaaagacaccatggtcatcgaatgtgaagccaagggaaaccctcat
cccattttctcatggaggcgtaatgggaagtatttcaacgtggcacgtgacactcaagct
tcaatgcgcagacgctcagggacgctggacatctatgcctggaacaatccagaacaatat
gaggcagagtatcagtgcattgcatccaatgagtatggatctgcatactcccacaagatc
agactacgactatacagagctcctgtgtggccaagggaggttctggagcccgtggtggtc
agcgctggcttgcctctggtcttgtcctgtgacccgccaccaggcccgccaaaacctgaa
atctactggatgtccagctgctcgtatgcgagacctttcaactggcccattcagacagcg
ttccccaccatgcagcctgtgcggcaggaccgcaggatatccatgggagtaaacggagat
ctgtacttctctaacgtcctgttcaacgattctgctgctgattactgctgtaatgcccgc
ttcccctacaagaatgtcatccaacagaagatgcccgtggttgttaaagtgcttacaact
cgtacagtgtccgaggctgcccccacctggctgtctcccacaggctcgtccagctccatt
ctcgtcctgcaaggggaagaactgctcctggagtgtatcgctgcagggatgccaactcct
cgcataacgtggaccaaggatggtgacgacctggtggtgacgtcgcgcatgaaagtaaag
aacttcagcaagatgattcaaatctcaaaggcatcttttgatgatgtgggtgaatacagt
tgcactgctaccaataagattggatacattgagcacacgataaccgtcagggtcaaagcg
gctcctttttggctggagaaacccactaatctggtcttggccccggaggaaaatggccgc
ctggtgtgtcgttctgatggggctcctcgtcccactatcagctggttcatcaacggggaa
ccaattgaaactgcaacaccgcagcctaacagacaggtggcaggagacacactgactcta
cgcagtgtgactgctgaaaacactgctgtctaccagtgcaatgcttcaaatcaatatggc
tacttaatggccaatgcttttgtcaacgtgctacatgcaacgccacgtatctttgggccc
agaaatgaactcatcaaggtgatagagggcagtcgttgcttcttagactgtcgctacttt
ggttcaccagtgcctgaattgcgatggtccaaatatggacaggggaatctggaaggaaat
cgttttaagacccacagtaacgggaccctggagatcaaacacatccggatagatgaccag
ggaatctacctttgtgttgtcagcaacatcgcgggaagagaagaaagtcaagtccgagta
gaagtaaaagagcccactttaattgtcacaagaccacagagtatgaaagtcatccgtgga
agtgatgtgcgctttgagtgtggtgtaaaagcagatgtcactactcctgtcacaacatcc
tggatgaaagacaaaaaatatctcactttgggctggagactctctctggatgaatcaaat
ctggttatcactaatgtaaacagaggcgatgaggggaattatacctgtgtcatcaagagt
gaactggaccagaaatctgcctcagcacgcctaatggtgatggaccacccagatcctccc
actaagttggagttgtcagatccatatgaacgcactgtaagactcagttgggtccctgga
gacagcaaccataatcctataacagagtacatagtgcagtatgatgatgatgactggttg
cctgggaagtggcgaaacctctcaagctacccaggggacctcaactctgtcattctgcac
cttacacccttcacctactatgagtttcgtgttatcgctgtcaatgcaatcggaatgagt
cgccctagtcgcccatctacgcgcttccagagcagcggtgcacctccagatgtcatcccg
aagaacgtaaagggtgtgggtacgtggaggaataacatggaaatcagctgggagcctctg
acctacagagagtggaatgggccccacctgaagtatctggtgtggtggagaaggagagaa
tccagagaggagtggaagaatgcaaccactaaatgggcaagatactacatctatgatgca
gataccttcactccatatgacatcaaagtccaggctgtcaacgactttgggctgggtcca
gagtctcctgttatcattggttactctggggaagaccgtcccttaactgcacccctgaac
ctgagagtgtccgatatcgagagcacccaggtgactttgcactgggactctgttacacgt
ggctctatgatgggatcactgaaagaatacaaggcctactactggagggacagtagccag
ctcaggtggctgagggtcaacagagggatgaagtcaaaatccttcccggacaatgatcca
gagccctctggggtcctcactgggctcatcccctatagcaactacaagctgtatatagtg
gtggcaaacaatcgatatgaagggccgccaagtaatacaatacacttctcaacgcctgaa
ggagtaccatctgctccaacatccttcaggatccaacagagacatctggacagcatttat
gtcgactgggacctgccagcagaacccaacggtatcattactggatattccctcaagtac
cagacagtgaatgccaccaggggtgaggagctgcgggtagaagagttaactccaaatata
acaagtttctcactccggcgatacgaccgctacactcgatacagattccacgtggcggcg
agaactcggatcgggataggggaatggcacacggaggagtcaccccactacaccactgaa
acgtatgctcaggaccaggtggacatctccactcagggctggttcatcgggattatgtgt
gctgtggctctccttgtgctcatcctactcatagtctgcttcatcaaaaggagccgaggg
gggaaatacccagttcgggaaaaaaaagacatttcattggagccagtggatgacaaagat
caggatggaacatttgactacaggtctcttgaaaggatagcacgtgtctccactctgcct
tacccccgacgagacgaggaaagagggcttcaaagaggccagtcatctatggaggcaatg
ataaagcgatcagacagtgacgacagtctggtggactatggggaaggaggcgagataccg
ttcaacgaggacggctcgttcatcggccagtacacaggaaccaggagagatgtcagggag
ttggactttggtggaagtctggagctgcactctcccatgaataccatctactccctggcg
taa
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integrated database retrieval system