Etheostoma cragini (Arkansas darter): 117948416
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Entry
117948416 CDS
T07493
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117948416 (dennd4a)
Membrane trafficking [BR:
ecra04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117948416 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
117948416
NCBI-ProteinID:
XP_034733919
LinkDB
All DBs
Position
8:complement(11727385..11751968)
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AA seq
1731 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDSSKPLEEELHFDDAGPKSVKPKSPITDVTVVIRSLGEEVP
PGFTCIESTPSGLSAELNGASLRGPQIFLCFKRGRDKPPLTDLGILYEWKEKLKPGCHIV
QTTPSGRPANISSSSSQRIYITYRRAPKSQPHTSLAVTDVCIIIPGKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSLAKANTIAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGATV
ECWPAHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPHSEEILSERQRSQLGLQSSGLGP
DRTRSVYSNKSICLLSHWPFFQSFRSFLTFLYRYSISGPHALPIEKHISHFMQNVPFPST
QRPRILVQLSPHDSLILSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALAGVLSAPCPFIVGVDSRYFDLYVPP
ADISCVDLDTNTISQKDDKKALTWKILPRRACKHLLNTLNKLHQQLAEGGQLNREDVQME
HTVTDSELNGGKSLHTLELEIQEAFLRFMAAILRGYRSYLLPITQAPSEKTTDASSLFDI
QGFLKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDECVDKLFTTGGKMDS
ERPEETRLIELDESHRSEHTVYINPPELPPLPQGEEHPLCYSYSGFPVLNAELLEPLEGP
NPPSAALASRHSSPASPSAIFRRSKQEIKSAQRMAKTYSSMPQMWSTCLLRHCYGLWFIC
LPGFVGTCHSKVRALRTAYDVLRKMQDKKLQAPDEVCYRVLLQLCGQYSQPVLAVRVLFE
MKKAGVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVVLGVLQFKQAGRKQQTPH
RDPHLSDCSDLDTVSHGSLDSANDSAERTSIDTDFTKMDSSDDGFSTGGQSDQGYDSLSK
EEERMCSRESDSTLSVEDKGQRQSTPEIEVPICDISPSTRSYKPTDVSAGNGNRLVSRPS
SDTILCGVLPKKERPKSLDLSGGQGSLRLTVPHLGSTNQHYLAADRLREVEEEETETDKQ
KPLVERSVSCSGAGERPGLSLERSASCSDGIVRRTGVESGFDPLSLMATDAVQECDRENS
GTNMARRDLAEDIEMYMNNGNSPLSSRTPSMDLQNPSSPLFGLASSPHTSPQPSTLLRSN
THIPIKSKERLRPSPSLPLGVCTKNRERPSSLVSPSSPSPSSSSFSMDSLFTPTLDIFKS
SVLSAGKGVAEKASRFYSRLSSQTSFTQDANCDQISISSLTSGEADCSSLLDHDSCLDPD
DFTSPQHGSVSRLRRSPVVGHTNLGSPSTPNRVFRHNSFSGGLALPCKTPHTPDSSPDTS
RFQPSPNYTIEVMMSSCSLCKTCDCLVYDEEIMAGWTANDSNLNSTCPFCGTAFLPFLNV
EIKDLRPLSRSSMESNPVTEEVTRGTLNPEADMSAANCAAQSSAATSKRQGSSGSAGPAP
VTVPYLSPLVLWKELESLLVNEGDQAISSPCVVDQHPIVFWNLVWYFRRLELPSNLPALI
LGSQHCSHGDQTPQSVSSEDSKQVLVRIMWDNLKLHKDKVQPCYVLWNTHCANSLIRSGL
CEDGQLFTVELLQGFVRSIKKSDLYQPMSLIIQLLGPELGFKRQRSLYRDVLFLALVALG
KNNININAFDREYKLAYDRLTPNQVKLTHNCDRPPGAGVMECKRTFGKPSL
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaaggtcctcgagtagccgactactttgtggttgccggtctcaccgac
tcgtccaagcctctcgaggaggagctccactttgatgatgccggtcccaagtctgtgaaa
ccgaaatcccctatcaccgacgtaactgtggtgatccgctccctgggcgaagaggtaccc
ccgggtttcacctgtattgaaagcaccccctcgggcctctctgcagaactcaatggagcc
agcctcaggggcccgcagatattcttgtgcttcaagcgaggcagagataagcctccgctg
acagatctcgggattctgtatgagtggaaagagaaactaaaacctggatgtcacatcgtc
cagaccacaccctcaggtcgccctgccaacattagcagctcgtcgtcccaacgcatctac
atcacttaccgccgcgcaccaaagagccagccccatacttcactggctgtcactgatgtc
tgcatcatcatccccggtaaaggggagacgccccctcacaccttctgcaaggtggacaag
aacctcaacagcagcatgtggggatcttcagtctacctgtgttataagaagtctctggct
aaagcaaacacaatagcttacaaagcaggtctgctgtgtaggtaccctgaagaggactac
gaatccttcccactgcctgagtccgtgcctatgttctgcctgcccatgggtgcaacggtc
gagtgctggccagcacacaccaaacactccctgcctgtgttttccacatttgttctgacg
ggtgcctccggagaaaaggtgtacggagcagccatccagttctacgagcctcactcagag
gagatactgtctgagcgtcagcgctcacagctcggcctgcaaagctctggtctcggacct
gataggaccaggagtgtgtacagcaacaagagcatctgtctgctctcccactggccgttt
ttccagtccttcaggagctttctcacttttctctaccgatactccatctctggaccacat
gccctgccaattgaaaagcacatctctcacttcatgcaaaatgtgccattcccctccact
cagagaccacgcatcctagtgcaactgtctccacatgacagcctgatactgagtcaacct
gtgtcctctccactgcctctcagtggtggaagcctctccacattactactgaatctgggc
ccaaagaacgcagccactctgctggtgctggctgtcacagagcacaagatcctggttcat
tccctgcgtccagctgtgctcacaagtgttacagaggcccttgtgtctatgatcttcccc
ttccactggccatgcccctacatccctctgtgcccgctggcactggccggtgtgctcagc
gcaccgtgccctttcatcgtgggtgtagactcccgatactttgacctttacgtgccccca
gctgacattagctgcgtggatctggacaccaacacaatctcccaaaaagacgacaagaag
gctttgacgtggaagatcttgcccaggagagcttgtaaacatcttttgaataccctgaat
aagctccatcagcagctcgctgagggtggccagttgaaccgggaagatgtgcagatggag
cacacagtaactgacagtgagctcaacggtgggaagagcctccacactctggagttggag
atccaggaggccttcctgcgcttcatggcggccatcttgcgaggctatcgctcttatctg
ctccccatcacccaagccccctctgagaagaccaccgacgccagctccctcttcgacatc
caaggcttcctgaagagcagagaccgctcccaccagaggttttactccctcatgaccaag
actcaaatgttcagccgtttcatagaggagtgctcctttgtcagtgataaagatgccagc
ctggctttctttgatgagtgtgttgataagctatttacaactggaggcaagatggacagt
gagcgaccagaggaaaccagattaatcgaactggatgaatctcaccgcagtgagcacacg
gtctatatcaaccctccagagctgcctccactaccacagggagaagagcatcctctgtgt
tatagctactctgggttccctgtgctgaatgctgagcttctggagccgctggagggacca
aatcctccatcagcagccctggcctcacgccacagtagcccagccagcccttcggccatc
tttaggcgctctaaacaggagatcaaatccgctcaaaggatggccaaaacctattcatct
atgcctcagatgtggtctacatgtctgctgcgccactgctatggtctttggttcatctgc
cttccagggtttgttggcacctgccattcaaaggtgcgggctctgcgtacagcttatgat
gtgctgaggaagatgcaggacaagaagttgcaggctccagatgaggtgtgctaccgtgtg
ttgctgcagctgtgtgggcagtacagccagccagtccttgctgtcagggtgttgtttgag
atgaagaaagctggagttcaacccaacgccattacctatgggtactacaacaaggcggtg
ttggagagcacctggccctccaccaccagaggaggctactttttgtggggaaagctgaga
aacgtggtcctaggtgtgctccagttcaagcaagcagggagaaaacaacagacgccgcac
agagaccctcatctttcagactgcagtgatcttgacacagtcagtcatggcagtttggac
agtgctaatgactctgctgagcgcacttccatcgacactgacttcactaaaatggactcc
agtgatgatggatttagtacaggtggacagtcagaccagggctatgattcactatccaaa
gaggaggaaaggatgtgcagcagagagagtgacagcacactatcggtggaagacaaaggc
cagaggcagtccacacctgagatagaggttccaatctgcgacatctccccttctactaga
agttataaaccaacagacgtcagtgcaggcaatggcaacaggctggtttccagaccatct
agtgacaccattctgtgtggagtcctgccaaagaaagagcggccaaaatctcttgacttg
tctggtggacaaggaagcctaagactcaccgtccctcaccttggctcaacaaaccagcat
tacctagctgctgacagactgcgcgaggtagaagaagaggagacagagactgataaacag
aaacctttggtggagagaagtgtcagctgcagcggtgcaggtgagaggccaggtctgtct
ttagagaggagtgccagctgcagtgatgggattgtgaggagaaccggggttgagagcggg
tttgatcccctgtcactgatggcgacagatgcggtacaagagtgtgaccgggagaacagt
ggcacaaacatggcccgccgcgacctcgctgaagacattgagatgtacatgaacaatgga
aacagccctctgagcagccgtacacccagtatggatctgcagaacccatcgagcccttta
tttggtttggcctcgtctcctcacacctcgccacagccctctaccctgctccgctccaac
acacacatccctataaaatccaaggagaggttgcggccatcaccgtctcttcctctgggt
gtctgtaccaaaaacagggagaggccttcctccttggtgtcaccctcctcaccttctccc
tcttcctcatcattctccatggactcactgttcacgccaaccctggacatcttcaagagc
agcgtcctatcagcagggaagggtgtggctgaaaaggctagccgcttctactctcgtctg
tcctctcagacttcattcacacaggatgcaaactgtgaccagatcagtatatcctcactg
acctcaggagaggcagattgctcctcactgcttgatcatgactcctgtctggacccagat
gactttacctcccctcagcacggcagtgtttcccgactcaggaggagcccagttgtgggt
cataccaacttgggcagccccagcacccccaatagagtgttcagacacaactccttctct
ggtggactggcacttccttgtaaaacccctcacactccagattcctcccccgacacaagt
cgattccaaccctctcctaattacaccatagaggtgatgatgtccagctgttccctttgt
aagacctgtgactgtctggtgtatgacgaggagatcatggctggctggacagcaaacgac
tccaacctcaacagcacttgtcccttctgcggcacagccttcctgcctttcctcaatgtg
gaaatcaaagacctgagaccactcagcaggtcttctatggaaagtaatcctgtcactgag
gaggtcacacggggaactctcaatccagaggccgacatgtctgccgcaaactgtgcagct
cagtcatctgcggctacctccaagaggcaggggagcagcggcagtgctgggccagctccg
gtgacagtgccctacctgagccctctggttctgtggaaggaactggagagcctgcttgta
aatgagggcgaccaggccatctcctccccgtgtgttgtcgaccaacaccccatcgtcttc
tggaacctcgtgtggtacttcagaaggcttgagctgccgagtaacctgccggctcttatc
ctgggctcccagcactgtagccatggagaccagactcctcagagcgtttcatccgaggac
agtaagcaggtgcttgtgaggattatgtgggacaacctgaagttacacaaagacaaagtt
caaccctgctatgtcctgtggaacacgcattgtgcaaactccctgattcgctctgggctg
tgtgaagacggccagcttttcactgtggagttactgcagggttttgtgaggagcattaag
aagagtgacctctatcagcccatgagcctgatcatccagctgttggggccagagctgggt
tttaaaagacagaggagtctataccgagatgtattgttcttggctcttgtggctttggga
aagaacaacattaatatcaatgcttttgaccgggagtacaagttggcatatgatcgcctc
acccccaaccaggttaaactgacacataactgtgaccgaccccccggagcaggggtcatg
gagtgcaagaggacttttgggaaacccagtctgtaa
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integrated database retrieval system
