Etheostoma cragini (Arkansas darter): 117948431
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Entry
117948431 CDS
T07493
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117948431 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117948431 (sf3b3)
03041 Spliceosome [BR:
ecra03041
]
117948431 (sf3b3)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117948431 (sf3b3)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
117948431 (sf3b3)
Spliceosome [BR:
ecra03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
117948431 (sf3b3)
Complex B
117948431 (sf3b3)
Complex C
U2 SnRNP specific factors
117948431 (sf3b3)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
117948431 (sf3b3)
TFTC complex
117948431 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
117948431
NCBI-ProteinID:
XP_034733937
LinkDB
All DBs
Position
8:complement(17205347..17237066)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGISHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GADGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFPNTG
DDWYVLVGVARDMILNPRSVSGGFIYTYRLISGGEKLEFVHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIYTIGQRVIVTDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESMVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttacaacatcaccttacagcgtgccacgggcatcagtcacgccatccatgga
aacttctcaggaaccaagatgcaggagattgttgtttccaggggaaagatcttggaatta
ttgcggccagacgccaacacaggaaaggtgcacactctgcttacagtggaggtgtttggc
atcgttaggtccctgatggccttcagactcactggaggaaccaaagactacattgttgtt
ggaagtgacagtggtcgtattgtcatcctggaatatcatccatccaaaaacatgtttgag
aagatccatcaggaaacgtttggaaagagcggctgccggcgcatcgttcccggacagttc
cttgctgtcgacccaaaaggcagagctgttatgataggagccattgagaaacagaagctg
gtttatattctgaacagagatgcagctgcaagattgaccatctcctcgccactggaagcc
cataaagcaaacacgttggtctaccacgtggtaggagttgatgtcggctttgaaaatccc
atgtttgcctgcctcgagatggactatgaggaagccgacaatgacccgaccggagaagct
gccgccaacacgcaacagacactcaccttttacgagctggacctcggtttgaatcacgtg
gtccgcaagtacagtgaggctttggaagagcatgggaatttcctcatcaccgttcctggt
ggtgcagatgggcccagtggagttctgatctgctctgaaaactacattacttacaagaat
tttggagaccagcctgacattcgctgtcccatcccacggcgcaggaatgacctggatgac
ccggagcgtggcatgatatttgtctgctcagccactcacaagaccaagtccatgttcttc
ttcctggcccaaactgagcagggagacatctttaaggttaccctggaaacagatgaagaa
atggtaacagaaatccggctgaaatactttgacactatccctgtggcaacagccatgtgt
gtcctgaagacaggcttcttgtttgtgtcttcagaatttggaaaccattacctttaccag
attgcccacttgggtgatgatgacgaggagcctgagttctcctctgcaatgccactggaa
gaaggagacaccttcttcttccaaccgcgtcccctcaaaaatcttgtgctagtggacgaa
caggagaacttatcacccatcatgtcctgtcagattgctgatttggccaatgaagataca
ccacagttgtatgttgcctgtggacgaggaccacggtctactctgagggtccttagacat
ggattggaggtgtcagagatggctgtgtctgagctgcccggtaaccccaatgctgtgtgg
acagtacgcagacatgtggaagatgagtttgatgcctacatcattgtgtctttcgtgaac
gctactctggttttgtctatcggggagactgtagaggaagtgacagattctggatttctg
ggaacaacgcctactctctcctgctcactgctcggtgaagacgccctagtgcaggtgtac
ccagatggtattcgccacatccgagctgacaagcgtgtgaatgagtggaagactcctggc
aaaaaaaccattgtccgctgcgctgtgaaccagcgtcaggttgttattgcactcactgga
ggggagctggtctactttgagatggacccgtctggacagctgaatgagtacacagagcgg
aaagagatgtctgcagatgtggtttgtatgagcctggccaatgtgccacctggcgagcaa
cgctcgcgattcctggctgtgggacttgttgacaacactgtccgaatcatctccctggac
ccttcagactgcctacagccgctaagtatgcaggccttgccagcccagccagaaagtctt
tgtattgttgagatgggaggggttgagaaacaggatgaacttggagaaaagggaaccatc
ggcttcctttacctcaacatagggcttcagaacggtgtgctcctgaggactgtgttggac
ccggtgacaggtgacctgtcagataccagaactcgctacctggggtcgcgacctgtcaaa
ctcttcagagtccggatgcagggacaggaagctgtgctggcaatgtccagtcgctcctgg
cttagctattcgtaccagtctcgtttccatctgacccctctgtcatatgagaccctagag
tacgcctctggctttgcctccgagcagtgccccgagggcatagtggccatttctaccaac
acactgagaatcttggctttagagaaattaggtgccgtcttcaaccaggtggcctttcct
ctgcagtacactcccaggaaatttgtaattcacccggagaccaacaacctcattttgatt
gagacggaccacaatgcatacactgaggcaaccaaagcccagagaaagcaacaaatggct
gaggagatggtggaggctgctggtgaggatgaaagagaattggctgccgagatggccgct
gcctttcttaatgagaatctcccagaagccatatttggtgcacctaaagctggagcagga
cagtgggcctcgctggtgcgtctggtcaatcccatacagggttcaactctggaccaggtg
cagctggaacagaatgaagctgccttcagtgttgcagtgtgtcgtttccccaacacagga
gatgattggtatgttctggtgggtgttgccagagacatgatcctcaaccctagatcagta
agcggcggctttatctacacctatcgtctcatcagtggaggggagaagctggagttcgtg
cacaaaaccccagtagaggacgtgcctttggccattgctcctttccagggacgagtcctg
gtgggagttgggaaactgctgagaatctatgacctgggcaaaaagaagctgcttcgcaag
tgtgaaaacaagcacgttcccaacctggtgactggcatctacacaattggccagcgtgtg
attgtgacggatgttcaggagagcctgttctgggttcgctaccgacgtaacgagaaccag
ctcatcatctttgccgatgacacatatccccgctgggtcaccacggcctgtctgctcgac
tacgacaccatggcctctgctgacaagtttgggaacatcagcattgtgcgtcttcccccc
aacaccagcgatgatgtggatgaagaccccacagggaacaaagctttatgggacagaggc
ctcctcaatggagcatcacagaaggctgaggtgataatgaactaccacgtaggagagacg
gtgttatccctccagaaaaccactctgatccctgggggttctgagtccatggtctacacc
actctgtctggaggcattggcatactggtcccattcacctcgcatgaggaccatgacttc
ttccagcatttagagatgcacatgcgctctgagttccccccactgtgtggcagagaccat
ctcagctttagatcctactacttcccagtgaagaatgtgattgacggagatctctgtgag
caatttaacagtatggaccctcacaagcagaaaagtgtggcggaagagctggacagaacg
ccacccgaggtctctaagaaactggaggacattcgcactcgctacgccttctag
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integrated database retrieval system
