Etheostoma cragini (Arkansas darter): 117948439
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Entry
117948439 CDS
T07493
Symbol
lrrc29
Name
(RefSeq) F-box/LRR-repeat protein 2 isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117948439 (lrrc29)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117948439 (lrrc29)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
LRR_At5g56370
LRR_8
F-box
LRR_At1g61320_AtMIF1
SAM_Ste50p
F-box_5
Motif
Other DBs
NCBI-GeneID:
117948439
NCBI-ProteinID:
XP_034733950
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All DBs
Position
8:17479071..17488891
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AA seq
654 aa
AA seq
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MEDCNWEDIIETPELPLEIIVHILSFLHASDRKEASQVCRSWYYASQDSQRKITFCFPAS
ASSLELIRGLGRKSRCGLIISQLDGFSMSRSLLLEVGECLGPKLESLALPGSSVTEASLM
ALLPRLTSLRSLNLRGLNSLFMSGAFLSREEHRKQVRSALSGLEELDLSDIRYISDLTFN
RLTGCTPRLRHLSLAGCHIAFEFDPYRGCPVGAVRDSSALLSLRNLRRFLTEQKSTLVSL
DLSRTSITPESLRTVAQVQDLVLEELCLHGCKELTDYSVEVLVKHQPSLQRLDISACTEL
TSRSVEAIAHGLKYLTHLSLSRDWRITEKGLADLLSVSSLRSLDLSECLHVNGTEIVNGL
AESRDARAQLETLNLKSCTYIRDLAVFSLTQLLGDSLRELDLTSCVNVTDLSVHAIATYL
QRLVVLRLGWCKEVTDWGLLGMVETARCDPDQETGDKGPRFTRTFGNMGFFKPPRLPFEE
RPKMVTQNDLQQFRQQAGASLLALSQLQELDLSACPKLTDSSITQVVHYPDLRRLSLSML
PEITDASLASVAWHCRSLTSLAISHCQRITDRGVAQAVPYLRRLQHLYLSCNNITDRSLL
LLVQHCNRLKTLDISRCKNISVTAVDLLQSQLPFLENVHYKFIGGFDMTLALND
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaagactgcaattgggaggacattatagaaacacctgagctgcctctggagatcata
gttcacatcctgagctttcttcacgcttcagacaggaaggaagcctcgcaggtctgccgc
agctggtactatgccagtcaggactctcagagaaagatcaccttctgcttcccggcttca
gcctcgtccctggagctgatcaggggtctgggaagaaagtcacgatgtggtctgattatc
agccagctcgatggcttcagtatgtccagatcactccttctggaggtgggtgagtgcttg
ggccctaagttggagagcttagccctgcctggtagcagtgtaacagaggcctctctgatg
gccctcctcccgcgcctcacctccctccgcagcctaaacctccgggggctgaacagcctc
ttcatgtctggggctttcctctccagggaggaacacagaaagcaggtcaggtcagctctg
tctggtctggaggagctggacctgtccgacatacgctacatctccgacctcaccttcaac
cggctcaccggctgcaccccgcgcctccgtcacctctcgctggccggctgccatatcgcc
tttgagttcgacccgtatcgagggtgcccggtgggagctgttagggattcctcagcattg
ctgtcactgaggaacttgcggaggtttttaacggagcagaaatccacacttgtatctctg
gacctcagcagaacctcaatcacccctgagtcactacgcacagttgcacaggttcaggat
ttggtcttggaggagctatgtctgcacggctgtaaggagctgaccgactactccgtagag
gttctagtaaagcaccagccgagcctccagagactggatatcagtgcctgcaccgagctg
accagccggtctgtagaggccatagcacatggcctcaagtacctgacacacctgtccttg
tcccgcgattggaggatcaccgaaaaaggcctggcggaccttctgtccgtctcatccctg
aggagcctggatctgtccgagtgtctgcacgtcaacggaacagagatagtaaacggcttg
gcagaatctagggatgccagagcacagctggagacactcaacctaaagagctgcacctac
attagggatcttgcagttttctctctcacccagcttcttggggattctctgcgggagcta
gacttgacatcgtgtgtcaatgtgaccgacctgtctgtgcacgctatagccacatacctg
cagaggctggtagttctgcggctcggctggtgcaaagaagtcacagactgggggctgctg
ggcatggtggaaacagccaggtgtgatcctgaccaggagacgggagacaagggtcccagg
ttcacccggacctttggcaacatgggcttcttcaagcctccccgtttgccgttcgaggag
cgacccaagatggtgacccagaacgacctgcagcagttcagacagcaggccggagcgtcc
ctcttagccctcagccagctgcaggagctggacctctcggcctgccccaagctcactgac
agcagcatcacacaggtggtgcattacccagacctccgccgcctgtctctctccatgttg
ccggagatcaccgatgccagcttggcgtcggtcgcctggcactgccgtagcctcaccagc
ctggcaatcagccactgccagaggatcactgaccgcggagtggcacaggctgtgccgtac
ctacgcaggctgcagcatctctacctctcctgtaataacatcactgacaggtccttgtta
ctgctggtgcagcactgcaaccgcctgaaaacactcgacatctcaaggtgcaaaaacatc
tccgtaacagctgtggacctgcttcaatcacagctgcccttcttggaaaatgtccactac
aaattcataggtgggtttgatatgacccttgcactcaatgactga
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