Etheostoma cragini (Arkansas darter): 117948487
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Entry
117948487 CDS
T07493
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03320
PPAR signaling pathway
ecra04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117948487 (pparab)
03320 PPAR signaling pathway
117948487 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117948487 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ecra03310
]
117948487 (pparab)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117948487 (pparab)
Nuclear receptors [BR:
ecra03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
117948487 (pparab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117948487
NCBI-ProteinID:
XP_034734004
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Position
8:complement(16379161..16414975)
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AA seq
469 aa
AA seq
DB search
MVDMESHYHPPSPLEDSVLGSPLCADHSFMGGMEELQDISQSIDNDALSSFDVPGYQSSS
NGSEGSTVLDALTPASSPSSVVYGMPAGQEEFSSASSSLNLECRVCADRASGYHYGVHAC
EGCKGFFRRTIRLKLEYDKCERRCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQS
EKLKLKAEMVTGDREVEDPQVADQKTLARQIYEAFLKNFNMNKAKARTILTGKTSTPPFV
IHDMETLQLAEQTLVAKMVGSAGTLKDREVEVRIFHVCQCTSVETVTELTEFAKSVPGFS
SLDLNDQVTLLKYGVYEALFAMLASSMNKDGLLVAYGSGFITREFLKSLRRPVSDMMEPK
FQFAMKFNALELDDSDLALFVAAIICCGDRPGLVNVAHIERMQESIVQVLQLHLLANHPD
DTFLFPKLLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacatggagagccattaccaccccccttcgcccctggaggactcggtgctgggc
agccccctgtgcgccgatcacagcttcatgggtggaatggaggagctccaggacatctcc
cagtccatcgacaatgacgccctcagctcctttgatgtccccggataccagtcctccagc
aatggctcagaaggttccactgttctagatgccctgacgccagcatccagcccgtcatcg
gttgtttatgggatgccagcgggccaggaggagttctcatctgcctcctcatcgctcaat
ctagagtgtcgagtttgtgctgaccgtgcctcgggttatcactatggagtccatgcatgc
gagggctgcaagggtttttttaggcggaccatccgtctgaagctggaatatgacaagtgt
gagcgtcgctgcaagatccaaaaaaagaaccgcaacaagtgccaatactgccgattccag
aagtgcctgtcggtgggcatgtcccacaacgccatccgttttggtcggatgccccagtca
gagaagctaaagctgaaggcggagatggtaacgggggacagggaggtggaggaccctcag
gtagccgaccagaagacgctggcccgccagatttatgaggccttcctcaagaacttcaac
atgaacaaggccaaggctcgaaccattctcaccggcaaaaccagcacccctcctttcgtc
atccatgacatggagaccctacagctggcagagcagacgcttgtggcaaagatggtgggc
tcagcaggaacgctaaaggacagggaggtagaagtacggattttccacgtctgccagtgc
acgtcggtggaaaccgtgaccgagctcacagagttcgcaaagtccgtccccgggttctcg
agcctggacctcaatgatcaggtgactcttttgaaatatggcgtgtacgaggcccttttt
gccatgcttgcctccagtatgaacaaggatgggcttcttgtagcgtacggctctggcttc
atcacccgggagttcctcaagagcctgcggcgtccagtcagcgatatgatggagccaaag
ttccagtttgcaatgaagttcaacgcactggaactggatgacagtgacctggccctgttt
gttgctgctatcatctgctgtggagaccgcccaggcctggtgaatgtggcgcacattgag
cgaatgcaggagagcattgtgcaggttctgcagctccacctgctggccaatcaccccgac
gacacgttcctcttccccaagctactgcaaaaactggctgaccttcggcagctagtcaca
gagcatgcacaattggtgcaggagatcaaaaagacagaggatacctcactgcacccactc
ctgcaagagatctacagagacatgtactga
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