Etheostoma cragini (Arkansas darter): 117948495 Help Entry 117948495         CDS       T07493                                  Symbol nlrc5 Name (RefSeq) protein NLRC5 isoform X1   KO K22615   NLR family CARD domain containing 5 Organism ecra  Etheostoma cragini (Arkansas darter) Brite KEGG Orthology (KO) [BR:ecra00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:ecra04054]     117948495 (nlrc5) Pattern recognition receptors [BR:ecra04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    117948495 (nlrc5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_6 NACHT NLRC4_HD2 LRR_4 LRR_NXF1-5 LRR_8 Atypical_Card NOD2_WH AAA_30 AAA_25 DUF6274 ABC_tran AAA_22 Motif Other DBs NCBI-GeneID:  117948495 NCBI-ProteinID:  XP_034734028 LinkDB All DBs Position 8:complement(21641656..21699914) Genome browser AA seq 1901 aa AA seqDB search MDEEAEPDNLNVNSVLAQESSEMLQVLSSQSPAILTKLCQIMPGDARRNIKMDPSGCSSS AVTKHIKAMLEYLRVANHADCCNFLQSMCILCEGIPMRLETRLMSVAGYANNVSENSSPH GTDGKSSAPSEQQLIKRPRIDHWEKYIAAVMSLLRRRWEQLSEHLVREVQPENVWVRLRT ANRGRDRPDQTPGSSDKGGRTQEPDGDYGYMDSKVTLETFLQGCAGKVTVLVGQAGSGKT LLMSCLGQQWAHGLGPIPSSYLFVLQEFRQLNILSHPLSLSELLFRHYLPLEGGNDEKRA IVDYLLSNPEQSCWVLDGYEEFSSKLTRQEVQRELLDPEQPLPVADLISGLLNRHLLPGC TVVVTCCARDVMDFEGISDKVGQLQGWDFHEIKEYVGNFFQIKGHSANRAIGVQAADLLL TSRHLLAMSSLPALCNICCICLENLLLKGEDQRRTQTPDETGSERRRKEKEKEEKVVHAE GGRREEGSIGGSYAQSRDQRGVKTRGEDTMMDDTNGRGQIPSTLTQVYLTILGAFLNRDP NTKGGTDEAKTTPQSFVCELSQLAWKGLEESKILFMEEDISQDVLEFSVRTGLLAQVELR REDGIPVNSYRFVHLTIQEFLAALRMMTSADVSDMQLKKRFSLRTRWTTKSDQRTIFTDS LHLYVCGLASPHCTAALVQLASTSGGTGGQSWVQKRQTLVLKLLKNLCHSNTLTGPKILD LCHCVQESQDNQLAKLVVGTRPTLELRNITLLPNDIDALAFVVNSVGDNGIGLDFRACSM ELECLDVLPSCQFIHYLSFRSRKYGDKFAEKLSSILPKFTTLKKLEFCGASLTTTGAASL ASALQNCPNITEINLNDNNLKDVGIKHIADLFAKPSRLVLVRLGQNSSSLEAVDYLIGKM SSCLKIQHLHADGKKELTITFFQNSDLNHHITKSEPTISLLNQTWSKPKMQKVAKSLARC PALSVLDMSGGHLDVETLRTLTDFLPKFNVTKKIIVNDSLSSVEGLMILTALLSKCPAVV ELHIRLQSPFQVSILFPGGREKPANETSKVLCLSCSCLLPSHLDRVWRSLGASSDLTLLD LSNNCLGNKGLKKVLDYLPCLSNIQEVNVSSNGIGMEGVVMLAGALSSHDNLTQIHISHG DRDQLILKFGPHKRDDQQQLKMFRINNSSLMPSDTNRICGRLVLCSSHFELDLSHSSLPD KAIENLVNILPKMGSLQRLNVSHSITSTAGALMMVRCLNVSQQVTSVEIAPQIESFIHFA SVKAEQASCRLTHCNLNGENLQRLLEILQQGPQLSDLDLSSNKLEDEGVKCFLDYLQKLK ITSYVNLSNNGLSQQGLLDVASALCTCNSVSGVEVSLGAEERCLIWFTQFEGCVKTLSVR ESNLEHDYLVRLAEIVSTCPSLTKLEFKNNLLQSDCIEDLVKLLNSSQRGFSVSIEERWI RSEEAVSLVCRCLELSSNIHTIRVHHNTLHLSLMKSTELTSVSLLDCAVKGYQLASMTSL ISRCSSLTKLDFSHNSLGVEGVEFLCSVLPLLPNLTCLSIGSKEACVTVVEKLSDALLRV AGIKCLNLSGHVISDTAAQIMTKMCPRLKSLNLSHCRWSAAAGLQLVTALQLCVSLEGLC LDSLQLNAESSVCLGQALRNIKNIRSLKLNKIVTVMGPSQANGLLDLLAAMEGLTRMEEI ELESWRLADRGLEQLTRLLPMWTELRKISLSKNLISDQSGEKLLEALKSCSHLEELHLSS NSLGDLTAARMAQVLPSLTHITVLDISENRIGYEGSVSLSKAIMCMKNLIKIHLTSIGTP ELCAVASSLAHCPLLQDVGLGWNNCDDEVAVELARVMPLCPKLKRIDLESNTVSVFGAEA LVRALQSCPALQLIRLWRNKVSLSEAQRLSLRDRRLNFSSI NT seq 5706 nt NT seq  +upstreamnt  +downstreamnt atggatgaggaggctgaacctgacaaccttaatgtgaactccgtcttggctcaggaatcc tcagaaatgctccaagtcctaagcagtcagtcacccgcaatcctaacaaagttgtgccaa ataatgcccggtgatgctcgtcggaacatcaaaatggaccctagtggctgttcttcatca gcagtaaccaaacatatcaaagccatgttggagtacttgagggtggccaaccatgcagat tgctgcaacttccttcagagcatgtgtatcttatgtgagggcatccccatgcgcctggag acgaggcttatgtcagtggctggatatgcaaataatgtttccgaaaattccagtccccat ggaacggatgggaagtcatcagcgccttcagagcagcagctcatcaaacgtccacggatt gaccactgggagaagtacattgctgcagttatgagtttactgcggaggaggtgggagcaa ctcagtgagcacctggtaagggaggtccagcctgagaatgtgtgggtcagactaagaaca gcgaacagaggcagggacagacctgatcagactcctggatcgtcagacaaagggggcaga acacaagagcctgatggggattatgggtacatggattccaaagtaacattggagaccttc ctccagggatgtgcagggaaggtgacagttctcgttggccaggccggatctggaaaaact ctgctgatgtcttgtttaggacagcagtgggcacatggactaggccctatcccttcatct tacctgtttgtcctgcaagagtttcgtcagctcaacatactatcccaccctctttccctg tctgagctgctattccgacactacctcccgctggaagggggcaacgatgaaaagagagcc attgtggattacctactttccaatccagagcaaagctgttgggtgctggatggctatgaa gagttttccagcaaactcaccagacaagaggtgcagagagagcttttggacccagaacag cctctgcctgttgcagacctcatctcagggctgttaaatcgccatcttcttccaggatgt actgtggtggtcacctgttgtgcacgcgatgtcatggattttgaaggcatatcggataaa gttgggcagttgcaagggtgggacttccacgagatcaaggagtatgtgggcaacttcttt caaattaaaggtcactcagcaaacagagctattggggtgcaggctgcagatctccttctt accagtcgacacctactcgccatgtcatccctccctgcactctgcaacatatgctgcatc tgtctggagaatttactgctgaaaggggaagaccaaagaaggacgcagacaccggatgaa acaggaagtgaaagaaggagaaaagaaaaagaaaaagaagaaaaagtagtacatgcagaa ggaggaagaagagaagagggcagtataggagggagttatgcacaaagcagagatcaacgg ggagtgaaaacgaggggtgaagacacaatgatggacgacacaaatggtagaggccagata ccctccaccctcacccaggtctacctcactattcttggtgccttcctgaaccgtgaccct aatacaaaaggaggcactgacgaggcaaaaaccacaccacaaagttttgtgtgtgagctg agtcagctggcctggaaaggcttagaggaaagcaagatcctcttcatggaagaagacatc tctcaggatgttttggagttttcagtcaggacagggctcctcgcacaggtggagctcaga cgtgaggatgggattcctgtcaactcctaccgcttcgttcatctgacaatacaggagttt ttggctgcactcagaatgatgaccagtgctgatgttagtgacatgcagctcaagaagaga ttcagtctgagaactcgctggacgaccaagtcagaccagaggacgatctttactgactcc cttcacctgtatgtatgtggtctggcttccccccactgcactgcagccttggttcaatta gccagtacctctggtggaacaggaggccaaagttgggtccaaaaacgacaaaccctcgtt ctgaaactactaaaaaacctgtgtcacagcaataccctaactggaccaaagatattggat ctatgccactgtgtccaggagagccaggacaaccaactagctaagctggttgtgggtacg agacccaccctggagctgcgcaacatcacgctattaccgaatgatattgatgctctggct tttgtagttaactcagtaggtgataatggcatcggattggacttcagagcatgctcaatg gagttggagtgtttagatgtcctgcccagttgtcagttcattcactacctcagttttcgc agccgcaagtatggcgacaagtttgctgagaagttgtcctccattctgccaaaattcaca acgctgaaaaaactagagttttgtggcgccagtctgactaccacaggagcagctagtttg gcctccgctctacagaactgtccaaacatcacagaaatcaatctgaatgacaacaatctc aaagacgtcggaatcaaacacatagctgatctttttgccaaaccgtcaagactggtcctg gtaaggctgggtcaaaacagcagctctctggaagcagtggactatctcattgggaaaatg tcttcatgcttgaaaatccagcaccttcatgcagatgggaagaaggaattgaccataact ttcttccaaaattccgatttaaaccaccatataactaaatctgaaccaacaatcagcttg ttgaaccagacatggagcaagcctaagatgcaaaaagttgcaaagtccctggcacgttgc cctgccttgtcggtcctggacatgtctggaggccatttagatgttgaaactctgaggaca ctgactgactttttgccaaagttcaacgtcaccaaaaagatcattgtgaatgacagcttg tcttcagtggagggtttgatgattctgacggctctgctgtctaagtgtcctgctgtggtg gagcttcatatcagactacagagtcctttccaggtgtcgatattgtttcctggaggcaga gaaaaacctgcaaatgaaacatctaaagtgctgtgtctcagctgcagttgtctgctgcct tctcatctggacagagtgtggaggagtttgggagcctcttctgatctcactttgctggat ctgtccaataactgtttaggcaacaaaggtctgaagaaagtgttggactacctgccttgt ctaagtaacatccaggaagtaaatgtcagtagcaatgggattggcatggaaggagtggta atgctggctggtgcattgtcctcccatgacaacttaacacaaattcacatcagtcatgga gacagagaccagttgattctaaagttcggccctcacaaaagggatgaccaacagcagcta aagatgttcaggataaacaacagcagccttatgccatcagacacaaaccgaatctgtgga cgattggtcctgtgtagctcccattttgagttagatttgtctcacagctcattgccagac aaggctattgagaatctggtcaatattctgccaaagatgggatcactgcagagactcaat gtcagccacagcatcacatccacagctggagccttgatgatggtcagatgtttgaatgtc agtcagcaagtcacatcagtggagatcgcgcctcagattgaatcattcattcattttgcc agtgtgaaagccgaacaagccagctgcaggttaactcattgtaacctgaacggtgaaaac ttgcaaaggctgctcgagatcctacagcagggtccccaactgtctgacctggatttatca agcaacaaactggaagatgaaggcgttaagtgttttctggattatctacaaaagctcaaa atcaccagctatgtgaatttgagcaacaacgggctgagccagcaggggctgttggatgtg gccagcgcactgtgcacctgtaacagcgtctccggtgtcgaagtcagtttgggagcagag gagagatgtctcatctggtttacacaatttgaaggttgtgtaaaaacgctgagtgtccga gagagtaatttggaacatgactatctggtcagattagcagagatcgtgtctacctgtccc agtctgaccaaactggaattcaagaacaatttgctgcagtcggattgcattgaagacttg gtgaaactgttgaacagcagtcagaggggattcagcgtcagtattgaggaacgttggatc agatctgaggaagctgttagtttggtgtgtcgttgtctggagctcagcagcaacatacac actatcagggttcaccacaacactttacacctgtctttgatgaagtccactgaactgacc tcagtcagcctcttggactgtgcagtcaaggggtaccagcttgcatctatgacgagcctc atctcaaggtgttcttccctgacaaagctggacttctcccacaacagcctgggtgtagag ggagttgagtttctctgttctgtcctgcccttgctgccaaatctcacttgtctcagtatt ggttccaaagaggcttgtgtgacggtggttgagaagctctcagatgccttgctgcgggtt gcaggcattaagtgcttaaacctatcaggtcatgtgattagtgacacagcagcccaaatt atgaccaaaatgtgcccccgtctaaaatcactcaatctgtctcattgtaggtggtcagct gctgcagggctgcagctcgtcacagcacttcaactatgtgtcagtctggaaggtctttgt ctggactccctacagctgaatgcagagagcagtgtgtgcctgggacaagcactaaggaat atcaaaaatatacgcagtctcaagctaaataagattgtcacagtgatgggtccgtcacaa gcaaacggtttgctagatctcctagctgctatggagggactcacacgaatggaggagatc gagctggagagctggaggctggccgatagaggactagagcagctgaccagactccttcct atgtggactgaactcaggaagatcagtctatcaaaaaacctaatcagcgaccaatctgga gaaaagctacttgaggctttgaagagctgtagtcacctggaagagctgcatctgtccagt aacagtctcggggatctcactgctgccaggatggcccaggttctaccttcactgacgcac atcactgtgttggatatttcagagaacaggattggatatgaagggtcggtgagtctgtcc aaagcaataatgtgcatgaagaacctcatcaagattcatctgacctctattgggactcca gagctgtgtgctgtagcttccagtttggcccactgtcccctcctacaggatgtgggtctg ggatggaataattgtgacgatgaagtggcagtggagctggccagagttatgcctctctgt ccgaagctgaaaagaatagatctggagtcaaacactgtgagtgtttttggagcggaggcc ctggttagagccttacagtcctgtcctgctctgcagctcatcaggctgtggaggaacaaa gtctccctcagtgaggcgcagaggctcagtctgagggacaggaggctgaatttctcatcc atctaa

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