Etheostoma cragini (Arkansas darter): 117948508
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Entry
117948508 CDS
T07493
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04115
p53 signaling pathway
ecra04120
Ubiquitin mediated proteolysis
ecra04137
Mitophagy - animal
ecra04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117948508 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117948508 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117948508 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
117948508 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117948508 (siah1)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117948508 (siah1)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117948508 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
117948508
NCBI-ProteinID:
XP_034734053
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All DBs
Position
8:21480626..21514097
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AA seq
341 aa
AA seq
DB search
MSLVQVKPKPASVALQAPPWNSLFRLFSCVATRSMHRTKEVPTFQEKTKALFGNLMDEEM
SRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLV
CSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKTEHEELC
EFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMM
QSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPR
SIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggtccaagtgaaaccaaagccagctagcgtagcactgcaagctccgccctgg
aattccttgttccgactcttctcatgtgtagccacgaggagcatgcacaggactaaagag
gtcccaacatttcaagaaaagacgaaagccttatttggaaatcttatggacgaagaaatg
agtcgccagactgccaccgcgctgcccacaggaacctccaagtgccccccctcccagcga
gtgcccaccctgtcgggcaccactgcctccaacagcgacctggccagcctgtttgagtgc
cctgtctgtttcgactatgtcctaccccccatcctgcagtgccagtctggacacctggta
tgctccaactgccggcccaagctcacctgctgcccaacctgccgaggccccctgggctcc
atcaggaacctggccatggagaaggtggccaactctgtcctcttcccctgcaagtacgcg
tcatcgggctgcgaagtcacgctgcctcacaccgacaagacggagcacgaagagctgtgc
gagtttcggccgtactcctgcccctgccccggcgcctcctgcaagtggcagggctccctg
gacgctgtcatgcctcatctgatgcaccagcacaagtccatcaccacactgcagggggag
gacatcgtgttcctggccacggacatcaacctgccgggcgccgtggactgggtgatgatg
cagtcgtgtttcggcttccacttcatgctggtgctggagaagcaggagaagtacgacggc
caccagcagttcttcgccatcgtgcagctcattggcactcgcaagcaggcggagaacttc
gcctaccggctggagctcaacgggcaccggcgccgcctgacctgggaggccacgccgcgc
tccatccacgagggcatcgccacggccatcatgaacagcgactgcctcgtcttcgacacg
tccatcgcacagctgttcgctgagaacggcaacctgggcatcaacgtcaccatctccatg
tgctag
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