Etheostoma cragini (Arkansas darter): 117948740
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Entry
117948740 CDS
T07493
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04150
mTOR signaling pathway
ecra04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117948740 (lrp5)
04150 mTOR signaling pathway
117948740 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117948740 (lrp5)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117948740 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
SGL
EGF_LRP2
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
117948740
NCBI-ProteinID:
XP_034734442
LinkDB
All DBs
Position
8:complement(28177747..28234949)
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AA seq
1538 aa
AA seq
DB search
MGGVLLELLPLPLLLLWSCLPAAVHGSPLLLFANRRDVRLVDAEGVRGESAIVVSDLEDA
AAVDFLYSEGLIFWTDVSEEAIKQTHWNLSSNSLKEALGTGQTVVVSGLDSPDGLACDWL
GRKLYWTDSETNRIEVANLDGTSRKVLFWMDLDQPRAIALNPAQRFMYWTDWGEEPRIER
AGMDGSNRKVIVVVDIYWPNGLTIDLVEQKLYWADAKLSFIHRANLDGSARETVVEGTLT
HPFALTLSEETLYWTDWQTRSIHACNKHSGDKTREILNGIYSPMDIQVLEAHRQPYIQTP
CSDTNGGCSHLCLLSPVQPFYSCACPTGVQLKPDGKTCKPGAEQVLLLARRTDLRRISLD
LPDFTDIVLQVDDIRHAIAIDYDPVEGYVYWTDDEVRAIRRSHIDGSNAVVLVTTEINHP
DGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLDPVNGYMYWTDW
GEHPKIERANLDGTERLVLLNSSLGWPNGLAIDHAAGKLYWGDAKTDKIEVINVDGSNRQ
TLLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKATAVREIIIDQLPDLMGLKATKVTE
TYGTNGCALDNGGCSHLCFWCRQAVSCACPMGMELLSDLQTCVVPEAFLLFTNRDNIRSI
SLGTNSNDVAIPLTGVKEASALDFDVSERRIYWTDIQAKTISRAYMNGSSVEHVIEFGLD
YPEGMAVDWMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLDNPRSLALDPAN
GYMFWTEWGGRPRIARAYMDGSTITTLVDKVGRANGLTIDYVDHRLYWTDLDTCMIESTN
MQGLQREIIVDDLPHPFGLTQYRDFIYWTDFNLRSIERADKRSGLNRTVVLQGQLELMLD
ILVFHSSRQEGTNECSHNNGNCAHLCLATPAGAQCRCASHYTLNPDGRNCSSPSSFLLFS
QKASISRMVLGEQSPDIILPIHVLRNVRAVSYDPLDRLVYWLDGRQNIRRARDDGAMSSM
IGSSGAQPADNQLHDLSLDPYSRQVYWTCETTNTINVQQMDGHTVGVVLKDDSDKPRAIV
VNAEKGYMYFTTVQERSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDADL
KRIESSDLTGANRIVLQDSNILQPMGLTILGEHLYWIDRQQQMIERVDKLTGDGRTRIQG
RISYLTSIHAVEEMDPQEFASHPCSRDNGGCSHICIAKGDGTPRCSCPMRLVLLQDLLHC
GEPPTCSTEQFTCSTGEIDCIPMAWRCDGFPECDDSSDEENCPICSVAQFQCDKGGCIDA
QLRCNGEPDCADHSDEQDCEIICPPNQFRCGDNQCITKKQQCDNYSDCPDGSDELACEYV
SPPSSGIPNTGPNTIGPVIAIILLVFVIGAAYFFCQRMVCRRYKGPSGTFPHEYISGTPH
VPLNFIAPSSSQHGTFQGISCGKSMMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKG
AFYPQILNPPPSPATDRSLYNTEIFYSSNSPSTTRSYR
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtgtgctgctggagctgctgccgctgccgctgctgctgctgtggagctgcctg
ccggcggcggttcacggatcacctctccttctgtttgccaaccggcgtgacgtacgattg
gttgatgcagagggtgtgcggggggagtcggctatcgttgttagtgacctggaggatgca
gcagcggtggacttcctgtattctgagggcctgatattttggacagacgtcagcgaggag
gccatcaaacagacgcactggaatctgtcatccaactcccttaaagaggcgctgggaacg
ggccagactgtggttgtatcagggctagacagtcccgatgggctggcctgtgactggttg
ggcagaaagctctactggacagactcagagactaatcggattgaagtggcaaacttggac
ggcacctctaggaaggtcctgttttggatggacttggaccagcccagggctatcgctcta
aaccctgcgcaacgcttcatgtactggacagactggggggaggagcccaggatagagcgg
gctggtatggacggcagcaacaggaaagttattgtggtggtggacatatactggcccaac
ggtctgaccatagacctggtggagcagaagctgtactgggccgatgccaaacttagcttc
attcacagagccaacctggacggttccgcacgagaaacagtggtggagggcacgctgacc
cacccgtttgctctaactctgtctgaggagaccttgtactggaccgactggcagacccgc
tccatccacgcctgcaacaaacacagtggagacaaaaccagagagatcctcaatgggatt
tactcacctatggacatccaggtcctggaggcccatcggcagccttacatccagactccc
tgtagtgacactaacggaggctgtagtcatctctgcctgctctctccagtccagcccttc
tacagctgtgcctgccccacaggagtccagctgaaaccagatggaaagacatgcaaacca
ggagcagagcaggttctgctgctggctcggaggaccgacctaaggagaatttcactggac
ctgccagacttcactgacatagtactacaggttgatgacatccgccatgccatagctata
gactatgacccggtcgagggttatgtctattggacagatgatgaggttcgcgccatccgg
cggtcccacatcgatggcagcaatgccgtggtgctggttaccacggagatcaaccaccca
gatggcattgctgtggactgggtggcaagaaacctgtactggactgatactggcactgac
aggattgaggtcaccaggctaaatggaacctctcggaaaattttgatttctgagaacctg
gatgaaccccgagccatcgtcctggacccagttaatggttacatgtactggaccgactgg
ggcgagcatcccaagatcgagcgggccaacctggatggaacggagcggctggttctgctc
aacagctctctgggctggcccaatggactggctatagatcacgccgcaggaaagctatac
tggggagatgctaaaacggacaagattgaggtgataaacgtggacggcagtaacagacag
actctgctggaggacaagctgcctcatatctttggcttcactctgctgggagattacatc
tactggaccgactggcagaggcgcagcatcgagagggtccacaaagccacggctgtacgg
gagatcatcatcgaccagctgcctgatttaatggggctgaaggccactaaagtgacagag
acttacggtacaaatggctgtgcgctggacaatggtggatgcagccacctgtgcttctgg
tgtcggcaggctgtcagctgtgcctgtcccatggggatggagctcctctcagacctgcag
acctgtgtggtgcctgaggccttcctgctcttcaccaacagggacaacatcaggagtatc
tctttgggtaccaacagcaacgacgtggccatccctctgaccggagttaaagaggcgtcc
gcccttgactttgatgtctctgagaggagaatctactggacagacatacaggccaagacg
atcagcagagcatacatgaatggcagctctgtcgagcacgtcatagaattcgggctggac
tacccagaaggcatggcagttgactggatggggcgtaacatctactgggctgatacaggc
accaaccgcattgaggtggcccggctggacgggcagtaccggcaggttctggtctgtaag
gatctggataacccgcgctcgctggacaacccacgctcactcgcactggacccggccaat
ggctacatgttctggacagagtgggggggtcggcctcgtatagccagagcctacatggac
ggcagcaccatcaccaccctggtggataaagtgggtcgggccaatggactgaccattgac
tacgtagaccatcggctctactggactgacctggacacatgcatgatagaaagcaccaac
atgcaaggccttcagagagagatcatagtggacgacctccctcaccccttcggtcttact
cagtaccgagattttatctactggacggatttcaacctgcgcagcattgaacgggcagac
aaacgcagcggactcaaccgcactgtggtgctgcagggccagctggagctgatgctggac
atcctggtgttccactcttcccgtcaggaaggaaccaacgagtgctcccataacaacggc
aactgtgcccatctgtgcctggccacgcccgctggagcccaatgtcgctgtgcctcccac
tacactctgaaccctgatggacgaaactgcagctctccctccagtttcctgctcttcagt
cagaaggcgagtatcagcaggatggtgttgggagagcagagtccagacatcatcctgccc
atccacgttctgaggaacgtccgggctgtcagctacgacccgctggaccggctggtctac
tggctggacggacggcagaacatccgcagggccagagacgatggagccatgtcctccatg
atcgggagcagtggtgctcagccagcggacaaccagctccacgacctgagcctggacccc
tacagccgccaagtctactggacctgtgagaccaccaacaccatcaacgtacagcagatg
gatggacacactgtgggcgtggtcctgaaggatgatagcgacaagccacgggccatcgtg
gttaatgcggagaaagggtacatgtacttcaccacggtgcaggagcgctcagctaagatc
gaaggagccagcctggacgggacagagagggagtctctgttcaccactggtctgatccga
cccgtggctctggctctggacaacaaactggggaaactgttttgggttgatgccgacctc
aaacgcattgaaagcagtgacctgacaggagccaatcgcattgtcctccaggactccaac
attctgcagcccatggggctgaccattctgggggagcatctgtactggatcgaccggcag
cagcagatgatcgagagagtggacaaactgactggagacggacgcacgcgcatacaggga
cggatatcatacctgacctccatccacgctgtagaagagatggacccccaggagtttgca
tcccacccctgttcccgcgacaacgggggctgttcacacatctgcattgctaagggtgac
ggcaccccccgctgctcctgccccatgcgcctggtgttactgcaggacctgctgcactgt
ggagagcctcccacctgctccaccgagcagttcacctgctccaccggcgagatcgactgt
attcccatggcctggcgctgcgatggcttccccgagtgtgacgacagcagcgatgaggag
aactgccccatttgctccgttgcccagttccagtgtgacaaaggaggctgcattgatgcc
cagctgcgctgcaacggggaaccagactgcgctgatcactctgatgagcaggactgtgaa
atcatctgccctcccaaccagtttcgctgcggtgacaaccagtgcatcactaagaaacaa
cagtgtgacaactactctgactgtcccgacggatcagatgagcttgcctgtgagtatgtg
tctcccccctccagtggcatccctaacaccgggcccaacaccatcggcccagtcatcgcc
atcatcctgctcgtctttgtgatcggggcagcttactttttctgccagcgtatggtgtgt
cgccgctacaagggccccagtgggactttcccccatgagtacatcagtggtacgccccat
gtgccgctgaatttcatcgcccccagcagctcgcagcacggcaccttccaaggtatctcc
tgtgggaagtccatgatgagttcagtgagcctgatgggcagcagcagcagcggagctcct
ctctacgacaggaaccatgtgaccggagcctcgtccagcagctcctcatctaccaaggga
gccttctaccctcagatcctgaacccccctccgtccccggctactgaccgctctctctac
aacacagagatcttctactcctccaacagtccgtccaccaccagatcatacaggtaa
DBGET
integrated database retrieval system
