Etheostoma cragini (Arkansas darter): 117948749
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Entry
117948749 CDS
T07493
Symbol
smpd3
Name
(RefSeq) sphingomyelin phosphodiesterase 3
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00600
Sphingolipid metabolism
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117948749 (smpd3)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
117948749 (smpd3)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
117948749
NCBI-ProteinID:
XP_034734469
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All DBs
Position
8:28922882..28950631
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AA seq
723 aa
AA seq
DB search
MVLHTSPYSSACLHFLDGLSWSLVFPCYWLLDRLLGSCVATSLEKRQRSQDPCSFLTLCV
VISAPLYLLLLLASLPFALLGFVIWAPLQAVRQPYLFTYRRPDKVQAEQGQAGPGVVGIG
EWRAQGRSFCFCSANVCLLPDSLARFNNLSDTHRRAREVGKRIRNGASRPQIKIYIDSPT
NTSISAASFSSLPTGFRRTSSLDQRPDQTHTTNGPADPEAEPLTECPIHPSVATDCPVHP
PAGDQGSSECPLHLNGGDTAADCPLHPAGTTSSSDCPVHTSGEAPNCPMHSTGAQSGQGH
QDCPMHGDGNQTKPSSVCPLYTSGVQISISAPEPDPQEEEARTGNHRPGEGGGDTGSMTA
SRESLARYHGGDTGMGISSNNTLSHVPRTSIFKRPGRKRRHGDETFDHEISAFFPANLDF
LALQEVFDHGSTTRLRRQLHRYFPYVLSDVGRYGWKGCCSRFKFLNSGLMLASRYPILDA
RFECYPNGRGEDALAAKGALFAKVHVGTSHQDQRVVGYLTCTHLHAIEGDASVRCEQLDL
LLQWGAEFRQSTSQLCEGEKVLEDLVAFDVILGDLNFDNCSSEDKLEQQHALFTQYKDPC
RLGPGEDKPWALGTLLDPSGLYDDEVSSPESLQKVMENEEGRKEYLVFPPSKSQCPASSQ
KGRKIPLKGNGRRIDYMLYSDEGLQPDWKLDIEEFSFVTQLAGLTDHLSVAMRLAVSTGE
EET
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggtcctccacacctccccttactccagtgcctgcctgcacttcctggacggcttgtca
tggagcctggtgttcccctgctactggctcctggaccggctcctgggctcctgcgtggcc
acctcgctggagaagcgccagcgctcccaggacccctgctccttcctcaccctgtgtgtg
gtgatctcagcgcccctttacctgctcctcctcctcgcctcgctgcccttcgccctgctg
ggcttcgtcatctgggcccccctgcaggccgtccgccagccatacctgttcacctaccgg
agaccagacaaagtgcaggccgagcagggccaggctggcccgggggttgttggcatcggg
gagtggagggcgcagggcaggagcttctgtttctgcagtgccaacgtatgcctgctgcct
gactccctggccaggttcaacaacctgtcagacacccaccggagagcccgtgaggtgggg
aagaggatccgcaacggggccagccggcctcagattaaaatctacatcgactcccccact
aacacttccatcagtgcggcatccttcagcagccttcctacaggtttccgccgtacctcc
tctctggaccagcgaccagaccaaacacacaccaccaacggcccagccgaccctgaggcc
gaacccctcaccgagtgcccaattcacccctcagttgccaccgactgccccgttcacccg
cctgcaggagaccagggctcctctgaatgccctctgcacctcaacggaggagacacagca
gcagactgccccctccaccctgcagggactaccagcagctcagactgtcccgttcacacc
tcaggcgaggctccaaactgccccatgcactccacaggggctcagagtggccagggccat
caagactgccccatgcatggggacgggaaccagacaaaaccatcgtcagtctgcccactg
tacacctcaggggttcaaataagcatcagcgccccggaaccagacccacaggaagaggag
gccagaacagggaaccataggcctggggagggagggggagacacaggcagcatgaccgcc
tccagggagtcacttgcccgttaccatggcggtgacactggcatggggatatcctccaat
aacactctctcacacgtcccgcgtacgtccatcttcaaacgccctgggcgaaaacgccgc
cacggagacgagacatttgaccacgagatctctgcctttttccccgccaacctcgatttc
ctggctctgcaggaagtgtttgaccacgggtcgacgactagactgcggcgccagttgcat
cgctacttcccctacgtgctgagcgatgtcggcaggtacggctggaaaggctgctgctcc
agattcaagttcctgaacagtggcctgatgctggccagtcgctacccaatcctggacgcc
cggtttgagtgctaccccaacgggaggggggaggacgctctggcggccaagggggcgctg
ttcgccaaggttcacgtgggcacctcccatcaggaccaaagggttgtgggatatctcacg
tgtacgcacctccacgccatcgaaggtgatgcatctgtacgctgtgagcagctggacctg
ttgctccagtggggggctgagtttcgccaatccacatcccaactatgtgaaggagagaag
gtgctggaagacctggtggcctttgatgtcatcctgggagatctcaactttgataactgt
tcttcagaggacaagctggagcagcagcatgcactttttactcaatacaaggacccgtgt
cgcctggggccaggggaggacaaaccatgggctctgggaactttactggaccccagtggc
ctgtacgacgacgaggtcagttcacctgaaagtttacaaaaagtgatggagaacgaggag
gggaggaaggagtacctggtgtttcctccaagtaagagccagtgtcccgccagcagtcag
aaagggaggaagatcccgctgaagggcaacggacgccggatcgactacatgctctacagc
gacgagggcctgcagccggactggaaactggatatcgaggagttcagcttcgtcacccag
ctggccggcctcaccgaccacctgtctgtggccatgcgattggctgtttccaccggagaa
gaggagacttag
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