Etheostoma cragini (Arkansas darter): 117948971
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Entry
117948971 CDS
T07493
Name
(RefSeq) integrin alpha-2-like
KO
K06587
integrin alpha 11
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
ecra04810
Regulation of actin cytoskeleton
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117948971
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117948971
09142 Cell motility
04820 Cytoskeleton in muscle cells
117948971
04810 Regulation of actin cytoskeleton
117948971
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117948971
Cell adhesion molecules [BR:
ecra04515
]
Integrins
Integrin alpha subunits
117948971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
VWA_2
FG-GAP_3
FG-GAP_2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
117948971
NCBI-ProteinID:
XP_034734831
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Position
8:530289..557428
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AA seq
993 aa
AA seq
DB search
MDYHHHHLPLLLLWTCSFLPDLQLCFNFDTKNFKIFSGSKENHFGYTVQQHEAGQRQCSA
WSRVSEVDPCDPCDPCDPCDPCDPCDLCGQTSRETTLPRRLFMLLGCETFMDIVIVLDGS
NSIYPWYEVQDFLITVLQKFYIGPGQTQVGVIQYGSTVVHEFGLAEYQTVEEVVEAARSI
DQRGGEETRTALGINVARSEAYRRGGRPGAQKVMIVITDGESHDSPQLVQAVGDSKRDNV
TMYAIAVLGYYNRRGINPEAFLKEIKFIASDPDEEHFFNVTDESALKDIVDALGDRIFSL
EGTSSQGRRFGLQMAQAGFSSHLVRDGVLLGAPGAYDWNGAVLKETKHGKVVPPKSSYED
EFPDELKNHAAYLGYAVGSLVSARGSQLYLAGAPRFNHTGKVIVFSLRNTGNLTILQALP
GEQIGSYFGSELLSMDVDADGLTDVVVVAAPMFYTEGWERGKVYVYTITPQTSFVLQGAL
EVSERSQNSRLGSALAQIPDMNGDGFRELVVGAPLEDDHQGAVYVFHGQDKTIKHQYRQV
RDLEPGLRGSSVRVSNLCRGSSVRVSNICRGSSVRVSNLCRGRRFRVSNLWRGSSVRVSN
PCRGRRVRVSNLCRGSSVRVSNLCRGSSVRVSNLWRGSSVRVSNLCRGRRVRVSNLCRGS
SVRVSNLCRGSSVRVSNLCRGSSVRVSNLCRGSSIRISNLCRGSSVRVSSLCRGSSVRVS
NLWRGSSVRRTDVSLLLRHGVQPLQRTKRQASRHHQPPPPGLHHVQRGVGRPAPAERPGG
SVPPAAERPAGENTPTITWTLHEENLFLRIGRHQLTFPSTCQSNYLKLELNPDPTVLDVG
CRGQPLTSVLRTLDQSGSNTGPSSGLLSPLSPDWLFWAAAGPQLSPDWLFWAAAASSETQ
RPAKTKRTRLVPVPGYSPDVGPEQDVLHGEQAQVLDLHAESHGAYPLLEPAQPGPARPGL
ARRHFPAQLGFFRRRRQEEDEQPVANGKAAEEL
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggattatcatcatcatcaccttcctcttctgctgctgtggacctgcagcttcctgcca
gatctccagctctgcttcaacttcgacacgaagaacttcaagatcttctcggggtccaaa
gaaaaccacttcggttacacggtccagcagcacgaggcgggacaacgccagtgctctgcg
tggagccgcgtgtcagaggttgacccctgtgacccctgtgacccctgtgacccctgtgac
ccctgtgacccctgtgacctctgtggtcaaacctcccgcgagacgactttacccagacga
ctgtttatgttgctagggtgtgagacgttcatggacatcgtgatcgtcctggacggttct
aactccatctacccgtggtacgaggtccaggacttcctcatcaccgtcctgcagaagttc
tacatcggcccaggtcagacgcaggtgggggtgatccagtacggctccaccgtggtccat
gagttcggtctggctgagtaccagacggtggaggaggtggtggaggccgcccggagcatc
gaccagcgggggggcgaggagaccaggacggcactgggcatcaacgtggcgcggtcggag
gcgtacaggcgcggcggtcgtcccggcgcccagaaggtgatgatcgtgatcaccgacgga
gaatctcacgacagcccccagctggtgcaggccgttggagacagcaagagggacaacgtc
accatgtacgccatcgcggttctgggttactataaccggcgggggatcaaccccgaagcc
tttctgaaggagatcaagttcatcgccagcgacccggacgaggagcacttcttcaacgtg
acggacgagtcggcgctgaaggacatcgtggacgcgctgggagacaggatcttctctctg
gaaggaaccagcagtcagggtcggaggttcggtctccagatggctcaggctggtttctcc
tcccatttagtcagagatggcgtgctgctcggggcgccgggcgcctacgactggaacggc
gccgtgctgaaggagaccaaacacgggaaggtggtccccccgaaatcctcgtacgaagac
gagttccccgacgagctgaagaaccacgcagcctacctgggctacgctgtggggtccctg
gtctcggctcgcggctcccagctctacctggccggagctccgaggttcaaccacaccggg
aaggttatcgtcttctccctgaggaacaccgggaacctgaccatcctgcaggcgctgccg
ggagagcagatcggctcgtatttcggcagcgagttgttgtcgatggacgtcgacgccgac
ggactgacggacgtagtcgtggtggcggcgcccatgttttacaccgagggctgggagaga
gggaaggtctacgtctacaccatcaccccccagacgtccttcgtcctgcagggggcgctg
gaggtttccgagcgctcccagaactcccggctgggttctgcgctggcccagatccccgac
atgaacggggacgggttcagggagctggtagtgggagcaccgctggaggacgaccaccag
ggggcggtctacgtgttccatggccaggacaaaaccatcaaacaccagtacagacaggta
agagatctggaaccaggtctaagaggaagtagcgtcagggtgtccaacctctgcagagga
agtagcgtcagggtgtccaacatctgcagaggaagtagcgtcagggtgtccaacctctgc
agaggacgccggttcagggtgtccaacctctggagaggaagtagcgtcagggtgtccaac
ccctgcagaggacgccgggtcagggtgtccaacctctgcagaggaagtagcgtcagggtg
tccaacctctgcagaggaagtagcgtcagggtgtccaacctctggagaggaagtagcgtc
agggtgtccaacctctgcagaggacgccgcgtcagggtgtccaacctctgcagaggaagt
agcgtcagggtgtccaacctctgcagaggaagtagcgtcagggtgtccaacctctgcaga
ggaagtagcgtcagggtgtccaacctctgcagaggaagtagcatcaggatttccaacctc
tgcagaggaagtagcgtcagggtgtccagcctctgcagaggaagtagcgtcagggtgtcc
aacctctggagaggaagtagcgtcaggaggacagatgtgtccctgctgttgcgtcatggt
gtccaacctctgcagaggacgaagcgtcaggcgagcagacaccaccagcctcctccgccc
ggtctccaccacgtgcagcgaggcgtcggccggccggcgccagcagagcgaccaggcggc
tccgtccctccggctgcagaacgtcctgcaggagaaaacacaccaaccatcacctggact
cttcatgaggaaaacctgtttctgaggatcggtcgtcaccagctaacctttccatccacc
tgtcaatcaaattatctgaagttggagctcaaccctgacccaacggtgctggatgtagga
tgcaggggacaacctctcacctcagtcctcaggacgctggaccagtcggggtccaacacc
ggcccctcgtctgggctgctcagccccctgtcccctgattggttgttctgggcggcggca
ggtcctcagctgtcccctgattggttgttctgggcggcggcagcgagcagtgagacccag
agacctgcgaagaccaagaggacgaggctggttcccgtgcccggttacagcccagacgtc
ggccctgaacaggacgtcctgcacggagaacaggcccaggttctggatctgcacgcagag
tcacatggtgcttacccactgctagaaccggcccagcccggcccggctcggcccggcctg
gctcggcgacattttcccgctcagctcggcttcttcagacggagaagacaggaagaggac
gagcagccagtagccaatgggaaggcagcagaggagctgtga
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