KEGG   Etheostoma cragini (Arkansas darter): 117949151
Entry
117949151         CDS       T07493                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform X1
  KO
K06245  laminin, beta 4
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra04510  Focal adhesion
ecra04512  ECM-receptor interaction
ecra04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117949151 (lamb4)
   04518 Integrin signaling
    117949151 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117949151 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB1 LAMB4 F5_F8_type_C
Other DBs
NCBI-GeneID: 117949151
NCBI-ProteinID: XP_034735085
LinkDB
Position
8:25..55844
AA seq 1802 aa
MIFIFFTLFLPEALLQDLRDQCPGGSCNPQLGDLMVGRAAQLSASSTCGLDGPENYCILG
YLEEKRKCFTCDSQLPYNLHSNPNSHRIKNVITTFDPERKMKWWQSENGVHEVSIQLDLE
TVFQFSHLVLTFKSFRPAAMLVERSKDFGRSWKVFRYFAEDCLLHFPSVSDQPAKSVDDV
VCDSRYSGSDPSTDGEVVLKALDPVFEIENPNAPHIQDLITLTNIRVNFTRLFTLGDTVL
GRRRRNPQDKYYYALYNMVVRGSCFCHGHASQCTPVDRGRESVFTMTAMVQGRCGCQHNT
AGDNCERCQDFHHDSPWRPGGENNANICRRCNCHGHSDSCHFDSARFQATGSISGGICDD
CRHDRTGPQCDQCQPFLYQDPQRAADDPHGCIPCDCDQAGSQGGGLCDALSGHCVCKENA
EGRRCDRCKHGFFNLTQDNPAGCQVCRCHFLGSVGSCDQLTGSCECDHLAVGPLCDRCLE
GFWGLGNSVFRCSPCNCDVGGAYSTTCSPEDGQCQCLSNMVGRRCSAPAPGYFLPLLDYF
LYEAELAAPLHGGSFPPSTPPSSSSPLVNPGALPRCEKYFRDQGYDFKFTNGRVVLVRRT
PGPARRRRQQRGFPLDPGHPLQIVTRQRTADRPVTWTGLGFVRVLEGAGLRFTVDNVPSS
MDYQLVIRYEPESPSDWLASVSIIAASLGDGRCHSGPTGSKTLILPGNSRGRILDSALCL
NTGGRYIVNVVFNRQPGSDASSSSHILIDSMGLIPRVQSVPDFCSQRDLNSFQHVRCVGL
AAELGPQGAAGVCEGLIKSVSARVHNGAVLCRCNAIGSVGPSCSDLGGFCECKPNVIGLC
CDTCAPLTFGFGLDGCKPCECDPRGSQAELCDQVRGQCVCHLEVTGRRCDRCQGGFWGFP
SCRPCECNGLSEECDEETGECLNCREQATGAHCDRCVDGYYGNLALRTPCQPCLCPDARS
SGRFFATSCQHDPQSLGVTCDCLEGHTGPSCDRCSPGFYGDLLLPGARCEECPCNNNISP
ADSNACDSVTGECLRCLHNTMGPRCQDCRPGYYGNALDQDCSECSCYRPGTEVTQCPLES
PCFCDLRTGQCPCRTGVTGILCDQCEDGYWNLGRASWCQPCNCDAVNSLSNTCNKVTGQC
PCRPEFGGRQCDECGENHFGNPDLQCISCDCNLEGTERPSCDPETGECLCRPGITGTFCD
ECAPGYDSAFPACAACHQCTTLWARSVTDVQRAAQRIQTFITVHGEDLRPRDGCQWQQTL
EMQSKQDGLANLTRLSPPSLDELEKLCAKIGKVKYSINPKMILIDPSALLNTDINNIRLE
FSTLLNNLKKKVTEAPGGERDHSEDLFFLLLDKIQKLHTIFMLDEKRVRNASKALEVSMD
TRQEVKRKLSMCSSGGGGKDRALLENKVKELSVLDLTGKICGGPGLEHCSGCGGALCGSL
DLGNGDCGGPHCDGVLPVSQMASETAERAKNRLVLLPSSLQESQTKIKDTQGAAQDTKDR
AKDLQDQITDSMDSLEREKNQTKHLIQRVKHYLTDETVPPEDIEKMSQAVLAVQFSGTPD
QIQSMIRDINSLLSNTVNVHNDLRSQQETAKTARDLLQRARELRERTKNIDVTEINKDIS
EAEKAQDHAVRDLDAASRDKDAAQDHIQDMKDKLDQVETKLMNRPKDLQDELEALIEKTD
QNKEMARDAYEAADSAVNQTTDIEPELQDVKRLFELLKQKHSKQTVQSEAGERLKNIVEE
AKKMNKQLEDKLQQIQDLEQKIQKLIQNKEAKAAEVSVLLDTVDSLQQEISRRAEGYNLC
SN
NT seq 5409 nt   +upstreamnt  +downstreamnt
atgatcttcatcttcttcaccctttttcttccagaagctctgcttcaggacctccgggac
cagtgtcccgggggctcctgtaacccccagcttggtgacctgatggtgggtcgcgcagca
cagctgtcagcctcgtctacctgcggtctggatggaccagaaaactactgcatcctcggg
tacctggaggagaagagaaaatgtttcacatgtgactctcagctgccgtacaatctccat
agcaaccccaacagccaccgcatcaagaacgtcattacgacctttgaccccgagaggaaa
atgaaatggtggcagtctgagaatggagttcatgaggtcagcattcagctggatctggag
accgtgttccagttcagtcacctggtcctcaccttcaagagtttccgtccggcggccatg
ttggtggagcgatcgaaggattttggacgaagctggaaagtttttcgttattttgcagaa
gactgtttgcttcatttcccttcagtgtcagatcagccggccaaaagcgttgacgacgtg
gtctgtgacagcaggtactccggttcagatccatccactgatggagaggttgtgctgaaa
gctcttgatcctgtatttgaaatagaaaacccgaacgcaccacacatccaagatctgatc
accttgacaaatatccgtgtgaacttcactcgtctgttcacgttgggcgacacggtgctg
gggcgaagacgcaggaaccctcaggacaaatattactacgctctttacaacatggtggtc
cgaggaagctgcttctgtcacggacacgccagccaatgtacgcctgtggacagaggaaga
gagagtgtctttaccatgactgccatggttcaaggtcgatgtggttgtcagcacaataca
gccggagataactgtgagagatgtcaggactttcaccatgactccccctggaggcctgga
ggagaaaacaacgccaacatctgcagaaggtgtaactgtcacggtcactcagactcgtgt
cactttgactcagctcgtttccaggcaacgggcagcatcagcggcggtatctgtgacgac
tgtcgtcatgacaggacagggcctcagtgtgaccaatgccaaccgttcctgtatcaagat
ccacagagagcggccgacgacccacacggctgcataccgtgtgactgcgaccaggcaggt
tctcagggcggcggtctctgtgacgccctgagcggccattgcgtctgtaaagaaaacgcg
gagggtcgacgttgtgatcgctgtaaacacggcttcttcaatctgacacaggacaatccc
gccggctgtcaggtgtgcaggtgtcattttttgggaagtgttgggtcttgtgatcagctg
acaggaagttgtgaatgtgaccatttggcagtgggaccgctgtgtgatcgatgtctggaa
ggtttctggggtttgggaaactctgtgttcaggtgttcaccgtgcaactgcgatgtggga
ggagcttacagcaccacgtgttctccagaggacggacagtgtcagtgtttatccaacatg
gtgggtcggcgctgctccgcccctgcccccggctacttcctgcctcttttagactacttc
ctgtatgaagcggagctcgctgccccgctgcacggaggaagctttcctccatctactcct
ccatcttcttcttctcctctggtcaacccaggtgctttgccgcggtgtgagaagtatttc
agagaccagggctatgacttcaaattcactaacggacgagttgttctggttcggaggact
ccaggacccgcccgccggaggagacagcagagaggcttccctctcgacccgggtcacccc
ctgcagatcgttacgcgtcagaggacagctgatcgccccgtcacctggaccggtctggga
tttgtccgagtgttggagggggcggggcttaggttcactgtggacaacgtgccgtcgtct
atggactaccagctcgtgattcgttacgagccagagtctccgtctgattggctggcttca
gtcagcatcatcgcggcgtcactaggcgacggcagatgccacagcggcccgacaggaagt
aaaactctgattcttcctggaaactccagaggacgtattctggactcggcgttgtgtctg
aacacaggcggtcggtacattgtgaacgttgtcttcaacagacagccgggatcggacgcc
tcgtccagctcacacatcctgatcgactcgatgggtctgatccccagggtccagtccgtc
cctgacttctgctcccagcgtgacctcaactctttccaacacgttcgctgcgtcggattg
gctgctgagctcggcccgcagggcgcggctggagtctgcgagggactcatcaagagtgtg
tcggcacgagtccacaatggagctgttctgtgcaggtgtaacgcaatcggctctgttgga
ccatcttgcagtgacctgggagggttctgtgaatgtaaacccaatgtgattggactttgc
tgtgatacctgtgcaccactgacgtttggttttggacttgacggctgcaaaccatgtgag
tgtgaccctcgaggttcgcaagcggagctgtgtgatcaggtcagaggtcagtgtgtgtgt
cacctggaggtcacaggtcgacgctgtgaccgctgccagggggggttctgggggtttcct
tcctgtcgaccctgtgaatgtaacggactgtcagaggagtgtgacgaagaaaccggagag
tgtctgaactgcagggagcaggccaccggagcacactgtgacaggtgtgtggatggttac
tatggtaaccttgcattgagaacaccctgtcagccctgcctgtgtccagatgctcggagc
agcggacgtttcttcgccacctcttgccaacacgacccacaatcccttggtgtgacatgt
gactgcttggaggggcacacaggtccgagctgtgacagatgcagccctggtttctatggc
gacctgttgttgcccggagcccggtgtgaggagtgtccctgcaacaacaacatcagcccg
gccgacagcaacgcgtgcgacagcgtgacgggagaatgtcttcgatgtctccacaacacg
atgggaccccgctgccaggactgcaggcctggttactacggcaacgccctggaccaggac
tgcagtgagtgctcgtgttaccggccggggacggaggtgacccagtgtcctctggagagt
ccctgcttctgtgatttgaggacaggacagtgtccctgcaggacaggggtgacgggcatc
ctctgtgaccagtgtgaggacggatactggaacctgggcagggcctcgtggtgtcaaccc
tgcaactgtgatgctgttaactctctgtccaacacctgtaacaaggtgacggggcagtgt
ccgtgccgtcctgagtttggaggaagacagtgtgacgaatgtggagaaaatcactttggg
aacccagacctgcagtgcatctcttgtgactgtaacttggagggaaccgagcgtccgtca
tgtgaccctgagaccggtgagtgtctttgtcggcccggcatcaccggtaccttctgtgat
gagtgtgcccctggatatgactcggcgttcccggcctgtgcggcgtgccaccagtgcacc
accctctgggccagaagtgtgaccgatgtccagcgagccgcccagaggatccagaccttc
atcactgtccatggcgaggacctgcgacccagagatggttgccaatggcaacaaacgctg
gagatgcagtccaagcaagacggcctcgccaacctgacaagactctccccgccaagtctg
gatgagctggagaaactgtgtgccaaaattgggaaggtgaagtacagtatcaaccccaaa
atgattctgattgacccgtctgctctcctcaacacggacatcaacaacattcgtctagag
ttcagcaccctgctgaataacctgaagaagaaagtcacagaggccccgggcggtgaacgg
gaccacagtgaggatttattctttcttctgctggataagatccagaagcttcacaccatc
ttcatgttggatgagaagagagtgagaaatgccagcaaagctctggaggtttccatggac
accagacaggaagttaaacgcaaactgagcatgtgcagcagcggcggaggtggcaaagac
cgggcgttgctggagaacaaggtcaaagagctcagcgtgctcgaccttacaggaaagatc
tgtggaggaccaggtctggagcactgttctggctgtgggggagcgttgtgtggatccctg
gatctgggaaacggggactgtggtggtccacactgtgacggagtgcttcctgtgagtcag
atggcatcagagacagcagagagggccaagaatcgactggtcctgctgccatccagttta
caggagtcccagaccaagatcaaagatacccagggagcagctcaggacaccaaagaccgg
gccaaagacctacaggaccagatcactgacagcatggactccctggagagagagaagaac
caaaccaagcacctgatccagcgagtcaaacactacctgacggatgagacggttcctccg
gaggacattgagaaaatgtcccaagctgttctggccgtccagttttcaggaacacccgat
cagatccaatcaatgatcagagacatcaacagtctactgtcaaacaccgtcaacgtccac
aacgacctgaggtctcagcaggagaccgccaagaccgccagagacctgctgcagagagct
cgggaactcagggagcggacgaagaacattgacgtgactgagatcaacaaagacatttct
gaagcagaaaaagctcaggaccacgccgtcagagacctggacgcagccagccgagacaaa
gacgcggcccaagaccacatccaagacatgaaggacaaactggaccaagttgagacaaag
ttgatgaatcgacctaaagatctgcaggatgagctcgaagccctgatagaaaagactgac
cagaacaaagagatggccagagacgcctacgaggctgcagactctgctgtaaaccagact
actgacatagaaccagagctgcaggacgtgaagaggctgtttgagcttttaaagcagaaa
cactccaagcagacggttcagagtgaagcgggagaacgtctgaagaacattgtggaggag
gcgaagaagatgaataaacagttggaggacaaattgcaacagatacaagatctggagcag
aagatccagaagctgatccagaacaaagaggccaaagcagctgaagtctccgtgttgttg
gacacggtggattctcttcaacaggaaatctccagacgggccgaaggatacaacctctgt
agcaactaa

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