Etheostoma cragini (Arkansas darter): 117949153
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Entry
117949153 CDS
T07493
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117949153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117949153
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117949153
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
HECT type E3
117949153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
117949153
NCBI-ProteinID:
XP_034735088
LinkDB
All DBs
Position
8:complement(23112047..23124726)
Genome browser
AA seq
1017 aa
AA seq
DB search
MFAWGEDSQRGFRLKVASHVDSRPTTDNGVHPMNVSYYITDLSGGHNVLAFVKSNGNAFI
IRTNVSKDGRRARGKQKFVEWKEKIRAVSCGDDMVTLLSERGTVLCVDATRTYIPRPLEA
LCSIPVCQVACGSQHSVALTKDGQVYTWGQDSRGQLGLGKRKPGANSPQHLRSLSALPLV
QIAAGGEQSFALSVSGGVFGWGRNHCGQLGLGDTTDRHTPTPVHCLHMKETIHISCGKNH
TATLTKTGAVFTFGSGQYGQLGHNSFRDELRPRLVAELWGAKVSMTACGQHHTLVLTDSK
RIYSFGCGEQGQLGHGGESQPSVPLPVQLPQDTADDPKVRNIFAGGNCSFATCRSNEDIH
EEANNDVTPHCLDDAIDKWTPECDSKSWKKIKQEIHRMFSSASCVNASFLEQSKDKHFQT
SSKYSGLNLSLARRAFKKLVKKDNVFAELEAAVLHLLPCLEKKPVGVEGLRIYLLLNELL
HVIHRHKWQNICTKLSEAVAAAVLNLSADSLLVIGDWWSSLSPSTMVRHVKVWKQALSMI
LSCRPVPRNSGVRNLLLVLQYMYNANNRIAEPGRLPERDFCVVIDKHFLQEDLQIWHLWS
KRKKMHAEPLILCSFPILLDLESKKFAFDMDTIISKQEAIQHTYLDLFWEYGCIPLPQDL
LFQLDLRRGSVLEDTLELLAVGCDSDYKLPLLIVFDENYTINDIPLYTKDFFHEVFHEMV
SVEYGMFMFNDSKTLAWFPSRATHEVQRYFQFGLLCGLAMYNHCIIHLPFPLTLFKKLLG
VKPSLVDMIEFSPCVGKSLLEILKVYEDNVIESLYEVFKITCDGTEVDLDLENPEKPVTG
QNKKEFVDAYVNHAFNTSVESVFQEFKRGFFQVCDRDLVKLFRPEELQEVLVGKDFQDWA
KLKQNTVYEGEYNTTPPHPTIQMFWEVFEELTEDQKKDFLRFVTGFERVPVLKMEKIKMT
VKVPQVQDLSYDWYFPETHTCNSTLELPLYSTKEIMHTKLTEALSKNSQNYKEDLRL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcatggggagaggacagtcagcggggctttcgcttaaaagttgcttcacatgtc
gacagtaggcctacaacagataatggggttcatcctatgaatgtcagttattacatcacg
gatctgtccggaggtcacaacgtactggctttcgtcaaaagtaatggaaacgcgttcatt
attcgcacaaatgtgagcaaagatgggagaagagccagaggaaaacagaagtttgttgag
tggaaagagaagattcgggctgtgagttgtggtgatgatatggtcacactgctgtctgag
agaggaacagttctctgtgtagacgcaactcgcacctacattccaaggcccctggaagct
ttgtgtagcataccagtttgtcaggttgcttgtgggagccagcattcagttgctctgacc
aaagatggtcaggtgtatacatggggccaggactccaggggccagcttggtctggggaag
aggaagcccggcgccaattcaccccaacacctccgatccctgtcagcgctccccttggtc
cagatcgctgcagggggagagcagagcttcgccctctctgtctctggaggtgtgtttggc
tgggggagaaaccattgtggacaacttgggctgggagacacaacagacagacacacacca
actcctgttcattgcctgcacatgaaggaaacaattcatatttcctgtggaaagaaccac
actgccactttgacaaagactggtgcagtgtttacatttggctctggccaatatggacag
cttgggcacaactcattcagagatgaactacgacctcggcttgttgcagagctctggggg
gcaaaggtctccatgactgcatgtggacaacatcacacattagtgttgacagactccaag
aggatctactcctttgggtgtggagagcaggggcagctgggacatgggggggagagtcaa
ccgtctgtgccgctacctgttcaactgccccaggacaccgctgatgatcctaaagtcaga
aacatctttgcaggaggaaactgttcgtttgcaacatgcaggtccaatgaggacattcat
gaggaggcaaacaacgatgtaacaccgcattgtctcgatgatgcaattgataaatggacc
cctgaatgtgattcaaagtcatggaaaaagataaaacaggaaattcacaggatgttctcc
tctgcatcttgtgtgaatgcaagcttccttgagcaaagtaaagataaacatttccagact
tcatcaaaatactccggcttgaacttgtcacttgcacgacgagctttcaagaaactggta
aagaaggacaatgtttttgcagagcttgaggctgctgtcctgcacttgcttccttgcctt
gaaaagaagcctgtgggagtggagggattgagaatctatctgcttctcaatgagctcctg
catgtgatccaccgacacaaatggcaaaatatttgcacaaagctttctgaggcggtcgct
gctgctgtactaaacttgtctgctgacagcctcctggtcataggggactggtggtcctca
ctttcaccttccaccatggttagacatgttaaggtgtggaagcaggccctctcaatgatc
ctgtcctgcaggcctgttcctcgcaactctggagtcagaaacctgctactagtcctccag
tacatgtacaacgccaacaacaggattgcagagcctggaaggttgccagaaagggatttt
tgtgtggtgattgacaaacactttcttcaagaggatctgcagatttggcatttatggtca
aaacgcaagaaaatgcatgctgagccacttatcctttgtagctttccaattctgttggat
ctggagtcaaagaaatttgcttttgacatggatactatcatctccaagcaagaagcaata
caacacacctacttggatttgttttgggaatatggatgcattcctctgcctcaagatctt
ctctttcaactggacctgaggcgaggatcagttttggaagacacccttgaactactggct
gttggttgtgacagtgactacaagttgccgcttttgattgtttttgatgaaaactataca
atcaatgatataccgctctacacaaaagacttttttcatgaagtctttcacgagatggtg
tcagttgaatacgggatgttcatgttcaacgactccaaaacgctggcatggttcccgtcc
agagcaacacatgaggtccagagatacttccagtttggacttctgtgtggactggctatg
tacaaccattgcatcatacacctacccttcccattgactctgttcaagaagctgcttggt
gtcaagccttcactggtggatatgatagaattcagcccatgtgtaggaaagagtctgctg
gaaatcctaaaagtctacgaagacaatgtcatagagagtctctacgaggttttcaaaatc
acctgcgatgggacagaggttgaccttgatcttgaaaatcctgaaaaaccagtgacaggt
caaaataagaaggagtttgtggatgcctacgtgaatcatgccttcaacacttcagtggag
agtgtgtttcaggagttcaagcgtggcttcttccaggtgtgtgacagggatttggtgaag
ctgtttcgaccagaggagctacaggaagtgctggtgggcaaagacttccaagactgggca
aagctgaaacagaacacagtttatgagggggagtacaataccacaccaccacaccccacc
atacagatgttctgggaggtttttgaggaactaactgaggatcaaaagaaagatttcctt
cggtttgtgactggttttgaaagggtgccggttcttaaaatggaaaagatcaagatgact
gtcaaagttccacaagtccaggacctctcctacgactggtacttccctgagacacacaca
tgtaactcaaccctggagctgccgttgtactcaaccaaggagatcatgcacaccaagctg
acagaggccctgagcaaaaactcacaaaactacaaggaggacttaaggctgtaa
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