Etheostoma cragini (Arkansas darter): 117949295
Help
Entry
117949295 CDS
T07493
Symbol
abcc8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117949295 (abcc8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117949295 (abcc8)
Transporters [BR:
ecra02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
117949295 (abcc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_23
AAA_29
nSTAND1
TraD_N
Motif
Other DBs
NCBI-GeneID:
117949295
NCBI-ProteinID:
XP_034735317
LinkDB
All DBs
Position
8:26596302..26676788
Genome browser
AA seq
1636 aa
AA seq
DB search
MISRYKTSPGSTMSLAFCGNENNSAAYNVDGGVLNNGCFLDALNVVPHVFLLFITFPILF
IGWGSQSSKVHIHHSTWLHFPGHNLRWLLTFVLLFILICEIAEGIFSDGFSQSLHLHLYM
PAALAFMAGITSIVYYHNIETSNFPKLLLALLIYWVLAFIMKTIKFAKYTEHGIGPGQLR
YCITGLLVLLYGLLLAVEINVILGRRYMCYAEPKEVKPPEDLQDLGVRFLQPFVNLLSKG
TYWWMNTFITAAHRRPIDLKVIGKLPIAMRALTNYIKLRKAFEDQKRPQGTAAQSPKLIW
QALRKAFGRPLILSITFRFLADLLGFAGPLCISGIVHNISKDNRTIQQPIKLLGINFISS
KEFLENAYVLTVLLFFALVLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSNMS
MGELTVAQICNLVAIDTNQLMWFFFLCPNLWAMPLQIILGVILLYYLLGISALIGATVIA
VLAPVQYFVATKLSQTQKSTLEYSSERLKKTNELLRGIKLLKLYAWEHIFCDSVEETRGK
ELTSLQAFALYTSISIFMNAAIPIAAVLTTFVVHVHISEDADLSPAVAFASLSLFHILVT
PLFLLSSVVRSTVKALVSVQKLSEFFSSDEIGDEQEPKAMVTPGSSNHNQNRYQAVKPSK
SFPSSSSSSLSRHHQPLKVVNRKRPPRDDWNNYSSQGDHEGDRPCQEVDQDICIKITSGY
FTWTDGPPTLSNVDIKIPFGKLTMIVGQVGCGKSSLLLAALGEMQRVSGTVTWNSLPNLE
SEGDESPTDRDAAGDGEIRKRGAVAYASQKPWLLNATLVENITFEMPMIKPRYKAVIEAC
SLQPDIDILPQGDQTEIGERGIILSGGQKQRISVARALYQQTHVVFLDDPFSALDIHLSD
HLMQDGLLKLLREEKRTVVLVTHKLQYLPHADWIIAMKDGTIQTEGTLKDIQNSEPDLFE
QWKTLMHRQDQEFETETEAASMTDLERKNLRRAMYSREAARTEEDEEGGTPEWTCEMAPA
ALVFDRAEESLESDDDDDLSQVMRQRATIPWRSCGTYLSSAGVLLLLLLLLSQLLKHSLM
VAIDYWLAHWTSHVIAAKMVTAQNCTVVQACGFSHSWYLSVFSVLCCLGIILCLFTSVAV
EWTGLKVAKELHHDLLNKIILAPMRLFETTPLGSILNRFSTDTNTIDQHIPTTLECLSRS
TLLCVSALGVICYVTPVFLIALLPLAITCYFIQKYFRVASRDLQQLEDSTQLPLLCHFSE
TVEGLPTIRALRYEPRFRQRLLQFTDANNIASLFLTAANRWLEVRMEYIGACVVLVAAVA
SITNSLYNQLSTGLVGLGLTYALMVSNYMNWMVRNLADMEVQLGSVKRINGLLKTEPENY
EGLLTASQVPDGWPREGEIKIQNLSVRYDATLKPVLKNVNAHINPSQKVGICGRTGSGKS
SFSLAFFRMVDMFEGKIVIDDIDISKLPLQTLRSRLSIILQDPILFSGAIRFNLDPEMKA
TDEMLWEALEIAQLKPVVKSLPGGLDAMVTEGGENFSQGQRQLFCLARAFVRKSSILIMD
EATASIDMATESILQKVVMTAFADRTVVTIAHRVHTILNADLVIVMKRGIILEYDRPEAL
LDKDDSVFTSFVRADK
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atgatctcacgatataaaacgagtcccggctccaccatgtccttggcgttctgtgggaac
gagaacaactcggcggcctacaacgttgacgggggggttctaaacaacggctgttttctg
gatgcgctaaatgtggtgccacatgttttcctcctcttcatcaccttccccattctcttc
atcggctggggcagccagagttcaaaggtccacatccaccacagcacctggcttcacttt
cctggtcacaacctacgctggctcctcaccttcgtcctgctcttcatcctcatctgtgag
attgcagagggcattttctctgatgggttcagccaatccctccacctgcacctgtacatg
cctgcagctttggccttcatggctggcatcacctctattgtctactatcataacatcgag
acctccaacttccccaaactgctattagccctgctgatctactgggtgctggccttcatt
atgaagactataaagtttgccaagtacaccgaacatggcatcggccccgggcagctgcgc
tactgcatcactggactgctggtgctgctgtatggactcctgctagctgtggagatcaat
gtcatcctgggaaggcgctacatgtgttacgccgagcccaaagaggtgaagccccccgag
gacctccaggacctgggtgttcgtttcctgcagcccttcgtcaacctgttgtccaaaggc
acctattggtggatgaacaccttcattaccgccgctcacagacgacccatcgacctcaag
gtgatcggcaaactgcccatcgccatgcgagccctcaccaactacataaagctacgcaag
gccttcgaagaccaaaagagacctcagggcacagcagcccagagcccaaagttgatctgg
caggctttgaggaaagcgtttggcagaccgctcattctcagcatcacgttccgcttcctg
gctgacctgctgggctttgccggccctctctgcatctccggcatcgtccacaacatcagc
aaggacaaccgcaccattcagcagccgataaagttgctggggatcaattttatttcctcc
aaggagtttctggagaatgcatacgtgctgaccgtgctgctcttcttcgccctggtcctt
cagagaaccttcctccaggcctcctactacgtggccattgaaacgggcatcaacctgcgc
ggggccattcagacaaaaatctacaacaagatcatgcgtctgtgcacctccaacatgtcc
atgggcgagttaactgttgctcagatctgtaacctggttgctatagataccaaccagctc
atgtggttcttcttcctctgccctaacctgtgggccatgccactacagattattctggga
gtgatcctgctctactacctcttgggaatcagtgccttgattggagcgaccgtcattgct
gtgttagctcctgtacaatactttgtggccaccaagctgtcccaaacacaaaagagcacc
ctggaatattccagtgaacgtctaaagaaaaccaatgagctgctgcggggcatcaagctg
ctaaagctgtacgcctgggaacacatcttctgtgacagtgtggaggagaccaggggcaaa
gagctcaccagcctgcaggcctttgctctttacacatccatctccattttcatgaatgca
gccattcccatagcagctgtattgacgacgtttgtcgttcatgttcacatctccgaggac
gctgatctgtccccagctgtggcctttgcctctctgtccctctttcacatcctggtcacc
cccctcttcctgctctccagtgtggtgcgctccaccgtcaaggctcttgttagtgttcag
aagctcagcgagtttttctcaagcgatgagattggagacgaacaggagcccaaagcaatg
gtaacccctggctccagcaatcacaaccaaaacagataccaggctgtgaaaccctctaaa
tctttcccttcatcctcctcctcctctttgtcccgccaccaccagccactgaaggtggtg
aaccggaagcgtccaccaagggacgactggaacaactacagctcacagggggaccacgag
ggcgacagaccctgccaggaggtggaccaagacatctgtataaagataactagcggttat
ttcacctggaccgatggaccaccaacactttctaatgtggacataaagattccttttggt
aagctgactatgattgtgggccaggtgggttgtggaaaatcgtctctgctgctggcagcg
ctgggagagatgcagagagtgtcaggaacagtcacctggaacagcctgccaaacctggag
tctgaaggagacgaaagtcccacggacagagatgcagcaggtgatggagaaatcaggaag
agaggcgctgtggcctacgcttcccagaagccctggctgttgaatgcgacactggtggag
aacattacctttgagatgcccatgatcaaaccgaggtacaaagctgtcatcgaggcctgc
tctctccagcctgacatcgacatccttccacaaggggaccagacagagatcggggagcgg
ggtattatcctgtcaggaggacagaaacagcgtatcagcgtggccagagccttgtaccaa
cagacccacgtggtctttctggatgacccattctctgctttagacatccatcttagtgac
catctgatgcaggacggtctgctcaagctcctgagagaggagaagaggacggtggtgttg
gtcacacacaaacttcagtatttaccacatgcagactggatcattgccatgaaagatggc
actatccagactgaagggactctgaaggacatccagaactctgagcctgacctttttgag
cagtggaaaaccctgatgcacagacaggaccaggagtttgaaacggagacagaggcggcg
agtatgacagatctggagagaaaaaacctgcggagggccatgtactccagagaggccgcc
aggactgaagaggatgaggaaggtggcacccctgagtggacttgtgaaatggctccagct
gcccttgtgtttgatcgagcagaagaatccctggagagcgacgatgacgacgacctgtcg
caggttatgcgtcagcgtgccaccatcccctggcgctcctgcggcacctacctgtcctcc
gccggcgtcctcctgctcctcctgctcctcctgtcacagctgctcaaacactccctcatg
gtcgccatcgactactggctggcacactggacgtcacacgtcatcgcggccaagatggta
acagctcagaattgcaccgtcgttcaggcctgtggcttcagccactcatggtatctgtcg
gtgttcagcgtgctgtgctgcctgggcatcatcctgtgtctgttcacctctgtggctgtg
gagtggaccggcctcaaagtggccaaggagctccaccacgacctgctcaacaagatcatc
ctggcccccatgaggctgtttgagacgactccactcggcagcatcctcaacaggttttcc
acagacacgaacacaatcgaccagcacatccccaccaccctggagtgcctctcccgctcc
accttgctgtgtgtgtctgctctgggcgtcatctgctacgtgacccccgtctttctgatt
gctctcctgccactggccatcacctgttacttcatccagaaatacttccgggtggcctcc
agggacctgcagcagttggaggacagcacccagctccctttactctgccacttctctgag
acagtggaaggtctccccactataagggccctcaggtatgagcccaggttcagacagagg
ttactgcagttcaccgacgccaacaacatcgcctctctctttctcacagcagccaaccgt
tggctggaggtccgcatggagtatattggagcctgtgtggtgttggtggcagctgtagcc
tccatcaccaactctctctacaaccagctgtccaccggtctggtggggctgggactgacg
tacgccctcatggtgtccaactacatgaactggatggtgcgtaacctggccgacatggaa
gtgcagcttggctcagtcaaaaggatcaacggcctgctcaaaactgaaccagagaattat
gagggactgctcactgcatctcaggtccctgacggctggccccgagagggagagatcaag
atccagaacctgagtgttcgatacgacgcaacgctgaagcctgtgctcaaaaatgtgaat
gcacacatcaaccctagccagaaggtggggatctgtggcaggacaggcagcggcaaatca
tctttctccttggccttcttccgcatggtggacatgttcgaggggaagattgtgattgat
gacatcgacatctccaagctgcctctgcagaccctcaggtcccgcttgtccattatcctc
caagaccccatcctgttcagcggcgccatccggttcaacctagaccccgagatgaaggct
acagatgagatgctctgggaagctctggagatcgctcagctgaagccggttgttaaatcc
cttccaggaggcctggatgccatggtgacggagggaggagagaacttcagccagggtcag
agacagctgttctgtctggccagagccttcgtcaggaagagcagcatcctcatcatggac
gaagccaccgcgtccatcgacatggcgacggagagcatcctgcagaaagtggtgatgact
gcttttgctgaccgaacagtggttactatagcacatcgcgtccacaccatcctgaacgcc
gacctggtgattgtaatgaagcgggggatcatcctggagtacgacaggcccgaggccctg
ttggacaaggacgacagcgtcttcacgtccttcgttcgagcagacaagtag
DBGET
integrated database retrieval system
