Etheostoma cragini (Arkansas darter): 117949371
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Entry
117949371 CDS
T07493
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03272
Virion - Hepatitis viruses
ecra03273
Virion - Lassa virus and SFTS virus
ecra04140
Autophagy - animal
ecra04142
Lysosome
ecra04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117949371 (lamp1a)
03272 Virion - Hepatitis viruses
117949371 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117949371 (lamp1a)
04142 Lysosome
117949371 (lamp1a)
04140 Autophagy - animal
117949371 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117949371 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117949371 (lamp1a)
04090 CD molecules [BR:
ecra04090
]
117949371 (lamp1a)
Membrane trafficking [BR:
ecra04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117949371 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
117949371 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
117949371 (lamp1a)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
117949371 (lamp1a)
CD molecules [BR:
ecra04090
]
Proteins
117949371 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
DEC-1_N
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
117949371
NCBI-ProteinID:
XP_034735461
LinkDB
All DBs
Position
1:complement(15321722..15328449)
Genome browser
AA seq
416 aa
AA seq
DB search
MKLSHALAALIIAWSAVLGCIQAVSLEVKDGNSTCIKAELSASFSITYNTSSSTRTVQVP
LPDSTTVDTGSSSCSTGDRSPWLVAVFGPGHALGLSFSTNGSLYSVTNLTLQYNLSDTSI
FPEANSSDVVTVVSESVGIWATINTTYRCVSPTTIRVGGATVTFSDMRLEAYMPGNDLSP
RESVCTADQGSTTAPPTTARTTATASPAPSPPGTPERGTYSVTKGNNTVCLLAQMGLQLN
VSYFSLSQNKTIQELVNLTPNLTSSSGSCEASSASLVLTQERTTTLNFTFTLNSTSNKYH
LSGIALLANWSDAIAAITASNTSLDYLRSTLGRSYMCNAEQTLAVVPAFSLNTFRLQVQP
FEVTTNQFATAEECQMDQDQMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctctcacgctttggccgcgctcatcatcgcctggtctgcggtattgggttgc
attcaggctgtttctcttgaggtgaaggatgggaactccacctgcataaaggctgagctc
tctgcatcgttctccatcacgtacaacacctccagcagcacgagaacagtgcaggtccct
ctgcctgactccaccacggtcgatacaggcagcagttcatgtagcacaggcgacagatcc
ccatggctggtggcggtgtttggacccggccacgcacttgggttgagcttttcaaccaat
ggaagtctgtacagtgttactaacctgacgctgcagtacaacctcagtgacacttccatc
ttccctgaggctaacagctctgatgtggtcactgtggtatcagagtcggttgggatctgg
gcgacgatcaacaccacctaccgctgcgtgagccccaccaccattagagttggtggagca
actgtcactttctctgatatgaggctggaggcgtacatgccaggaaatgacctgagtcca
agagaaagcgtatgtacggcagatcagggcagcactacagctccacctaccactgcccgt
actacagcaaccgcatctccagcaccaagccctccaggaacccctgagcggggcacctac
tctgtaaccaaaggcaacaacactgtatgtctcctggcccaaatgggactgcagctcaac
gtctcctatttttctctatctcagaataagactatccaagaattagtcaacctgactccc
aatctgacaagttcatcaggatcatgtgaagccagcagcgcttccttggttttgacacag
gagcggaccaccacgctcaacttcaccttcactctgaactccacgagcaacaagtatcac
ctgagtgggatagctctgcttgccaattggtcagatgcgattgccgccatcacagccagt
aacaccagcctggactacctgcggagtacgctgggccgatcctacatgtgtaacgcagag
caaactctggctgtggtgccggccttctctctcaacacattcagactgcaggtccaaccc
tttgaagtcactaccaaccagtttgctaccgcggaggagtgtcagatggaccaagaccag
atgctcatccccatcattgttggagcagcccttgccggcctagtgctgatcgtccttatt
gcatatctaataggcaggaagaggagccacgctggataccagaccatctga
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