Etheostoma cragini (Arkansas darter): 117949402
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Entry
117949402 CDS
T07493
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117949402 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117949402 (tubgcp6)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
117949402 (tubgcp6)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
117949402 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
AAA_23
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
117949402
NCBI-ProteinID:
XP_034735527
LinkDB
All DBs
Position
8:complement(15681883..15707397)
Genome browser
AA seq
1961 aa
AA seq
DB search
MYSSSNNPMKSSSSNSSSITEQLGALCDCHLSGVSWKRRALGGVSREGFRRALKKCAYGA
LLSKLFQDNTKGSASGLSATANTPPKNKVLMICFDLRVAGCREEAERLEEQLGMLLDGAS
SGLKEVDSVLELLVHLAGSAPPPPTSFISDYMRRERPVLRRPQPWGYQSEELQRLEARAW
SLVCGEEWGTLESLCGNQRLMDAPPGTGLLALSTKLEVEERFERETRMTLFGALQHTRTS
DIDIRLDLPPVPSNIDVTGLAIRVPPCIDQSEDEGFQSASNMTPDSQSETSPIPDVDIWE
ALRTFEPGRRRCWESVGCPPGKRESLYLTEGGREAFDQLYRLWEGEMRVVSTATPSPLLP
LPLDSQALLVFDLLNVLIGVASTTFPLNQSVQFDVRPGVCVSGASPESVSRLLGELAQYG
THYLRLSRFSLPSAGKKGLVFQAFTGGLRKYLHYYRACVLSTPPTLSLLTIGFLFRKVGR
QLRYLSELCCVDGPLGAGQATFPVGVKLLSYLYNEAQNNCSNENCAVLLSLLKSSCEPYT
RFVSDWVYSGVFRDVYGEFMIQVNEDYLVFRDKHFWVQGYTLISKDVEDCVPIFLRDIAN
EVYVCGKTINLLKICCPQHYICWSELPVPRIAVTFSLQEVEDIERDCAVYRGRMERIAKH
SAVSREEQAQRAEQARQELINQVRQSAAKTLESIRGRQVSQRLAEEAKKKERFEELKQQL
EQEQEWRSIATQRQEEDDYSFARELRDREKRLQALEEQLEQRARKELIAQYSRLSEDAAR
RERRAMWRVQRMRLDEPRAQFFIHDRQQTQAMLEKYPLGKKRPPMKGFPPVTLTQQTAIQ
PTLESTTQHLSEQHSADTQESDAVSPDPSLPTHTDLTVNLALISENIDINDFLPKSSNPN
SQQVDIALQEIGSDLPEECPTAQLVDYDFDAPFSPLEGITGQDSVQPQPRWGPAVQPDLI
KNHPSFSHIPIGENISQVQDCLPKASTYGQASKSSFTLGQYTPEEFQNTPKANIYGHPSQ
ASLHLVDGSGSMTDNKQAEVASMIIEMGNLETKEANKDKGNSVEAAKYSDVPDAALSATP
EQSGKDNGHYKPVTSFSDCGGIDPPEANPNPSTQDCSSDAQDKAGDNNSLPNVHLPSAQL
NAGELVLDAVAQQPLPRVHGHSSDACIKVGQFVSDVTAPLPSLNIHGHASGSHIKIGEHI
LEVDASQLSSSLYSHSSDAHVKVGESVSDVAAPLPFPNAHGHSSDAQIQVGENISAVVPL
PAPSIHGHSSDANIKVGEFLSNIPEATPRESKHGHASDCILQSGCVVSGTEPTLSALPRS
AYGHSSDSGLGGGCVVSGDEPKRSPLPGSAYGHSSDSGLGGGCVVSGDEPKRSPLPGSAY
GHSSDSGLGGGCVVSGDEPKRCPLPGSAYGHSSDSGLGAGCVVSGDGPKHSPLPGSAYGH
SSDSNLGVGCVVSKTKPLPSQLPGSTYGHSSDSTLGVGCVVLGTELQASALQGSTYGHSS
DSSLAVGCVVKGKGVSNQQKTDDNEDGKGSISDSPGEQLVEVMGSWAEGFGLSPGEKSEQ
EYLLALCAQYEVEKYEDCYNLMASSPECQLLKQVIRGPWGLPMDPTLRRATDTTVVQLSE
MVSLPVLIKQAVTTPLITHVSLVNKAVVDYFFVELGVERHFEALRHFLLMEDGEFAQSLS
DLLFEKLGSGQTPGELLTPLVLNSILSKALQYSLHGDTPLAGNFTFALRFLPETFHPHAP
DSLNCLELRYKVDWPLNIIITDSCMNKYNRLFSFLLQLKHMVWSLREVWFHLKRTALVKG
AGRSVQFRQLQLYRHEMQHFVKVIQGYIANQILQVSWSEFTAKLATANDLDAIHRTHADY
LNRAIFRGLLTEKAAPVMNIIHSIFSLILKFRAQLIAQPWGSQQGEAVHPSFIAMQQSYN
TFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYKDS
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaagctcaaacaacccaatgaagtccagcagcagcaacagcagcagcatcact
gagcagctgggtgccctgtgtgactgtcatctgtctggggtgtcatggaaacgtcgtgcc
ctgggtggagtatcaagagaaggtttccgcagagctctcaaaaaatgtgcctacggcgcc
ttgctgtctaagctatttcaagataacaccaaagggtctgcctcaggactgagtgccaca
gctaatacaccacccaaaaacaaagttttgatgatatgttttgacttgcgggtggcaggg
tgccgagaggaagcagagcgtttggaggagcagctggggatgctgctggatggcgcatct
tctggccttaaggaagtagactctgtcctcgagctcttggtacatctagctggttcagcg
cctccaccccctacctctttcattagtgactatatgagacgagagaggcctgtgctgcgg
aggcctcaaccctggggctaccagagcgaggaattgcagaggctagaggcccgggcatgg
agtctagtgtgtggggaggaatgggggactttagagagtttatgtggaaatcagaggttg
atggatgctcctccaggcacaggactgctggctctgagtactaaattagaagtggaagaa
agatttgagagggagaccaggatgacgctgtttggagcactgcagcacactcgcacttca
gacatagacataagactggacctgcctcctgttcccagtaatattgatgtaactgggctg
gctatacgggttcccccatgtatagatcagtctgaggatgagggtttccagtcagcttcc
aacatgaccccagactctcagtcagagaccagccctattccagatgttgatatatgggag
gctcttcgcacgtttgagcctggaagacgccgctgctgggagtcagtaggctgcccccca
gggaaaagagagtcactctatctaacagagggaggcagggaggcctttgaccagctctat
cgtctatgggagggagagatgagggtggtcagcactgctaccccctctcctctcctcccg
ctgccgctggactctcaggcactactggtatttgacctcctcaacgtcttgatcggagtg
gcgtccacgaccttccctctcaaccagagtgttcagtttgatgtcagacctggtgtgtgc
gtgtcaggagcctctccagagagtgtgtctcgtctcctgggggagctggcccagtacggc
acccactacttgaggctaagtcgcttttctctgccgagtgctggaaaaaaaggcctagtc
ttccaggcttttacaggtggtctgcggaagtatctgcattactacagggcttgtgttctc
agcaccccacccaccctcagcctgttgaccattggcttcctcttccgcaaagtgggccgc
caactaaggtacctgtcagaactgtgctgtgtagatgggcctttgggtgcaggccaggct
accttccctgtgggtgtcaaactgctgtcctacctgtacaatgaagcacagaataactgt
agcaacgagaactgcgcggtcctcctgtcgctgctgaagagcagctgtgaaccttataca
cggtttgtgtctgactgggtgtatagcggcgtgtttcgggatgtttatggagaattcatg
atccaggttaatgaggactatctcgtcttcagagacaaacacttctgggtccaaggctac
actctgatctcaaaggacgtggaggattgtgtgcccatcttcctgagagacattgccaac
gaagtgtatgtctgtggtaaaaccatcaacctcctgaagatctgctgcccgcagcactac
atctgctggtcggagctgccggtgcctcgcattgctgtcaccttctccctccaggaggtt
gaggatattgaaagggactgtgctgtgtaccgcggacgcatggagcggattgctaagcac
agcgccgtcagcagggaggaacaagcccagcgagcagagcaggcccgccaagagctgatc
aatcaggtcagacagtcagcggccaaaaccctggagagcatccgtgggcgccaggtgtca
caacgtctggctgaggaggccaagaagaaggagcgttttgaggagctgaaacagcaactg
gagcaggaacaagagtggcgaagtatagccacacagaggcaggaggaggatgactacagc
tttgcgagagagctgagggacagagaaaaaagactacaagccctcgaggagcaactggag
cagagagccaggaaggagctaatagctcagtacagccgtctgtcagaggatgcagctcgc
agagagagacgggccatgtggcgggtgcagcgaatgagacttgacgaaccccgggctcag
ttcttcattcatgacaggcagcagactcaggcaatgctagagaaatatcctttaggcaag
aagagacctcccatgaaagggtttccacctgttaccttaacacaacagactgcaatacaa
ccaacactggaatctactactcagcatctgtctgagcagcattcagcggacactcaagaa
tctgatgctgtatcacctgacccgtctttacctacccacaccgaccttacagtaaacctc
gcactcatctctgaaaacattgacatcaatgattttctccctaaatcatcaaatcctaac
agtcagcaggtagacatcgccctacaggagattggctctgacctacccgaagaatgtcct
acagcacagctagtagactatgactttgatgccccctttagtccacttgaaggtatcacg
ggtcaagactcagtccaaccccaacctcgctggggacctgcagtccagcctgacttgatt
aaaaatcatccatctttttctcacatccccataggagagaacatctctcaagtccaggat
tgcctccccaaagccagcacctatggccaagcctccaaatccagctttactctaggccag
tacaccccagaggagtttcagaatacacctaaagcaaacatttatggacatccctctcaa
gcctcactgcacctagtagatgggagtggctcaatgacagacaacaagcaggcggaagtt
gcttctatgatcattgaaatggggaatttagaaactaaagaggcaaacaaagacaagggt
aactctgttgaggctgcaaaatacagtgacgtaccagacgcagctttgtccgccacccca
gaacaaagtggcaaggataatggtcattacaaaccagtgacaagtttttctgactgtggt
gggattgatccacctgaggcaaatcctaacccaagcactcaagactgcagctcagatgct
caagataaagctggtgataataattctttgccaaacgttcatctacccagtgctcagctt
aatgctggagagcttgttttagatgctgttgctcagcagcctttacctagagtccatgga
cattcctccgatgcttgcataaaggttggacaatttgtatcagatgtaactgctcctctt
ccatcccttaacatccacggtcatgcctcaggttcccatatcaaaattggagaacatatt
ttggaagttgatgcttctcaattgtcctccagtctttacagtcactcttctgatgctcac
gttaaagttggggaaagtgtttctgatgtagccgcccctctgccctttccaaacgctcac
ggtcacagttcagatgcccaaatacaagttggagaaaatatctcagctgttgtgccactt
cctgctcccagcatccacggtcactcctctgatgctaatataaaagtgggtgagtttctg
tctaacatacctgaagcaacacctcgtgagagtaaacatgggcatgcctcagactgcatt
cttcaatcaggctgtgtggtgtctggaactgaacccaccttgtctgctctacctcgcagt
gcatatggtcattcttcagactcaggattgggtggcggatgtgtagtttcaggagatgaa
cccaagcgttctcctctacctggcagtgcatatggtcattcttcagactcagggttgggt
ggtggatgtgtagtttcaggagatgaacccaagcgttctcctctacctggcagtgcttat
ggtcattcttcagactcagggttgggtggtggatgtgtagtttcaggagatgaacccaag
cgttgtcctctacctggcagtgcttatggccattcttcagactcagggttgggtgctgga
tgtgtagtttctggagacggacccaaacattctcctctacctggcagtgcttatggtcat
tcttccgactcaaatttaggtgttggatgtgttgtgtccaaaactaaaccacttccatca
caacttcccggcagcacctatggccactcctctgattcaacactgggtgtgggttgtgtg
gtgttgggcacagagctacaagcctctgcactacaaggcagcacttatggccactcatca
gattcttcactcgcagttgggtgtgtggtgaagggcaaaggcgtctcaaatcagcagaag
acagacgacaatgaagatggtaaaggttctatttcggacagccctggtgagcagctggtt
gaggtcatggggtcctgggcagaaggcttcggtttgtcccctggagaaaagtctgagcag
gaatatctcttggctttgtgtgctcagtatgaggtggaaaaatacgaagactgctacaac
ctaatggcttcatcccccgagtgtcagctgctgaagcaagtaattcggggaccctggggt
cttcctatggaccccacactccgcagagccacagacaccactgttgtccaactcagcgag
atggtttctctgccagttctgataaaacaggctgtcactaccccactgataacacatgtg
tcattggtgaacaaggcggtggtggactacttctttgtggagttgggggtggagagacac
tttgaggcgctgcgtcacttcctgctgatggaggatggcgagtttgcacagtccctcagc
gatctgctctttgaaaagctgggcagtggccagactcctggcgagctgctgacccccctg
gtccttaactccatcctcagtaaggccctgcagtacagcttgcacggggacaccccctta
gcaggtaactttacctttgccctgcgcttcctcccggagaccttccacccacacgcccct
gattctctcaactgtctggagctccgctacaaggtggactggccgttgaacatcatcatc
acggacagctgcatgaacaagtacaaccgtctgttctcgttcctgctgcagctcaaacac
atggtgtggagcctccgcgaggtctggttccacctcaagagaacagcactggtgaaaggt
gcaggtcgctcggtgcagtttcgtcagctgcagctatacagacatgaaatgcagcatttt
gtcaaggtgatccagggatacatcgccaaccagatcctgcaagtgtcctggagcgagttc
acagccaagctggccactgccaacgacctggacgccattcaccgcacgcatgcagactac
ctcaacagagccatcttcaggggtttgctgacagagaaggcagctccggtcatgaacatc
atccacagcatcttcagcctgatcctcaagtttcgggcccagctgatcgcacagccctgg
ggcagccagcagggggaggcagtgcacccgagcttcatcgccatgcagcagtcgtacaac
accttcaagtattactctcacttccttttcaaagtggtgaccaagctggtaaacagaggc
taccagcctcatctagaagatttccttcttcgcatcaacttcaacaactactacaaagac
tcctga
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