Etheostoma cragini (Arkansas darter): 117949412
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Entry
117949412 CDS
T07493
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117949412 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117949412 (taf3)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117949412 (taf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
RNA_pol_Rpc4
TFIID-31kDa
PHD_2
PHD_5
Motif
Other DBs
NCBI-GeneID:
117949412
NCBI-ProteinID:
XP_034735568
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All DBs
Position
8:complement(14482549..14490729)
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AA seq
930 aa
AA seq
DB search
MCESYARSLLRVSVAQICQALGWDAVQLTACDQLSDVLHRYIQQLARVCHRYSELYGRTD
PVLDDVSQAFRLLGVSLSELEDYVHNLEPVPFAQQTPLFPVSKNNVLQFPQPGARDAEER
KDYIPDYMPPLVSLQEEEEEEEVLADMGTSAEAMQVALEEDEEEMDEDETVNDENHPLKR
HLDSPDAAMGMMPTTKRPRMYPGLSPEWGVEPREPLTSLNPQRVPPGMLPSHDSLDPLSP
ETPSGALPSFRPQPVAPKHSDQKGLTTPGRKPKVSSPGRQRTKSPKGVIPVPVSGSPIHS
PKPSKEKKKSPGRTKSPKSPKSPKMGSGKASHPQIKTELVHKLPLSALSERMGKENIHMP
QNLEDRELAEGPFKKLEPDNAAIDDSIDAVIARACAEREPDPFAFSSGSDSDSNGFSSPR
RLTIMEPSTPKLLIGGSISVKDTSTPLHLQAHAGLGNWTMDDSINEVIRKVNQGGPSAPP
PNQGDCVSSGSASPPTPEPLLKVFEEKNKIVSSVDVKKKLKKELKTKMKKKEKDKPKDKD
REKDKGKLKEKNKDKNRDKNKDFSKDGKLLWKEFGVKDDEHFLQRDFTLPEGSIKIKTGD
GPKKEKEKHKDKKKDKEKSKKDKDKRDKGKDRSKDDRQKQSTFPLGEIPPLFSPSACLRI
PSMLPPLAPILHDKDIKSKEKDKKKDKKEKKKKKDKEKDKEREKAKEKEREKEEKRKEKE
REKEKREKEKEKERIRLEKVKVETPAALPSPVIPRLTLRVGAGQDKIVISKVVPNSEPKT
PAPKTTVAKSGPGNRPRTPPPTPVLCPVVPTLPPAPTPLPPAPAPSSLLSPAPVLSPAAS
FKTPVRSVVTETVSTYVIRDEWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGILT
APPEDQQWFCVKCSSKKKDKKHKKRKHKLH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagagctatgcccgctcgctgctgcgtgtttcggtggcgcagatctgccaggct
ctgggctgggatgcggttcagctcactgcgtgcgatcagctgtccgatgtgctgcatcga
tatatccagcagttggccagggtctgccatcggtactctgagctctatggaagaacagat
ccagtcctggatgatgtcagccaggcattcagactgctgggggtgagtctgagtgaactg
gaggattatgtccacaacctagagcctgtgcccttcgcccaacaaacgccgctctttcct
gtcagcaaaaacaacgttctgcagtttccccagcctggagcccgggatgcagaggaaagg
aaggattacattccagattacatgccacccctggtctccttacaagaagaagaggaggaa
gaagaagtccttgctgacatgggcacctcagccgaagctatgcaggtggcactggaagag
gatgaggaggaaatggacgaagatgagacggtcaacgacgagaaccacccactaaagaga
cacctggacagtcctgatgccgccatgggtatgatgcctaccaccaagagaccccgcatg
taccctggcctcagcccagaatggggggttgagcccagggagccccttacctctctcaac
cctcaacgtgttcctccaggtatgctgccttctcatgatagccttgaccccctgtcacct
gaaacaccttctggagccctgccttccttcagacctcagccagtagcaccaaaacactct
gatcaaaagggcctcaccactccaggaagaaagcctaaggtctcatcccctggcagacaa
cggactaagtcccctaaaggggttattcctgttccggtgagtggtagtcccatccattct
ccgaaaccgtctaaggaaaagaagaaatccccagggaggacaaagagtcctaaaagcccc
aagagcccaaagatgggttccggcaaagcatcccacccacagattaagacagagcttgtg
cataagctaccgctgtctgcgctgagtgagaggatgggcaaagagaacatccatatgcct
caaaatttagaggacagggagttagccgagggccctttcaagaaactagagcccgataac
gcagccatcgatgactccattgatgctgtgattgccagagcatgtgctgagcgggagcct
gatccttttgctttctcttcgggttctgattcagatagcaatggattctccagccccagg
aggctgaccataatggagccgtctacacccaaactcttgattgggggaagcatctctgta
aaagacacgtcaacaccacttcacctgcaggcacacgcaggcctgggaaattggactatg
gatgattctatcaatgaggtgatccgaaaggtcaaccaggggggtccgtccgctccccca
ccgaaccaaggagactgtgtctcatcgggatcggcctcaccacctactcctgaaccttta
ctcaaggtgttcgaggagaagaacaagattgtgtcatcggtagatgtcaagaaaaagctg
aagaaggagctcaaaactaaaatgaagaaaaaggagaaagacaagccaaaagacaaagac
agagaaaaggataagggcaagctgaaagagaagaacaaggataagaacagggataaaaac
aaggacttttctaaggatggcaagctgctgtggaaggagtttggagtgaaggatgatgag
cacttccttcagcgagactttactctgcctgagggctccatcaagataaaaaccggagat
ggtcctaagaaggagaaggagaaacacaaagacaaaaagaaggataaagaaaaaagtaaa
aaggacaaagataagcgggacaagggtaaagacaggagcaaggatgacaggcagaaacaa
tctacctttcctctgggtgaaatcccaccactgttcagcccgtctgcctgcctgcgcatc
ccctccatgcttcctcctttggccccgatcctccatgataaggacataaagagcaaggag
aaggacaagaagaaagacaaaaaggagaaaaagaaaaagaaagacaaggagaaggataag
gagcgagagaaggcaaaagaaaaggagagggagaaagaggagaagaggaaagaaaaggag
agggaaaaggaaaaacgagaaaaggagaaagaaaaagagagaattcgattggagaaggtg
aaagtagaaactccagcagctctgccatctcccgtcatccccagactgacgctccgggtg
ggggcaggccaggacaaaattgttatcagcaaggtggttccaaattcagagcccaagacg
ccagcacccaagaccaccgtggccaagtctggacctgggaatcgccctcggacgcccccc
ccaaccccagtactctgcccagtggtacccactctgcccccagctcccactccacttcca
ccagcgcctgccccttcatcgttgctctccccggcccctgtgctctctcccgccgcatcc
ttcaaaacaccggtccgcagcgtagtaactgagactgtcagtacctacgtgatccgagat
gaatggggtaaccagatctggatttgtcctggatgcaacaaacctgatgatggcagtccc
atgataggatgtgatgactgtgatgattggtatcattggccttgtgttgggatccttaca
gcccctcctgaggatcagcagtggttctgtgttaaatgttccagcaagaagaaggacaaa
aaacacaagaaaaggaaacacaaactgcattga
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